Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1234 ATGGACCGCAGTTTTCTATACAACCAATTCGCTCCACTGGCTGGAATGATCGCCGCCGAGTGCGCCACCGTCGGCTCAAACACCGTCTACAAAGCCATTAGCGGCCATGAAATCAGCTTCTATGTCTTCACCTTCTACACTTGTCTCGCTGCCGCTCTCGTTCTTCTTCCTTTCGCCTTAATCTTCCGCAGATCTGGCGTTTTTCCGTCCGATAAGTTGTCGTTCTTCCTCAGATTGATCAGCCTGTCGGCGATGGGAGTTGGATGTCAGCTGTTTTCGTATAAAGGTTTGGAATACAGTTCGCCGACGCTTGCTTCCGCCATTAGCAATCTCATACCAGCTCTCACTTTCATCTTGGCCGTTCTCTTTGGGATGGAGAAACTAGCTTTGAGAAGCTCAAGCAGCATAGCCAAAATCGTTGGCTCGACAGTCTCCATAACAGGTGCACTAGTAGTGGTTCTCTATAAAGGTCCAGTCATTCTATCAAACCCATTTTCTAGGCCAACCAGATTGAATCTTCCTCCTCGTCGTTTGGGCTCTTCCCAACCAAATTGGATAATGGGTGGCCTCTGCTTTTTTGCTCAGTACCTTCTCAACTCTTTCTGGTACATTGTTCTGACCCAAACGATGAACATATATCCAGATGAACTAGTTGTGGTGTGCTTATTTTATGTGTTCGAGGTCATAATAGCTGCACCAATATGCCTATTAGCGGAAGGAAACATCGGTGCTTGGAAGCTGAAAAATAGTCTGGAAGTGGTTGCTGTTTTAAACTCGGGATGTGTGGGTCAATCCTTCGTCTCTGCAATCCACACATGGGGTGTACATGTCAAAGGGCCTGTTTATGTATCAAGTTTCAGGCCACTCTCAATTGCCATTGCTGCTGCTACAGGTGTTATCTTCCTTGGGGACGATCTTCATCTTGGAAGTATTATTGGAGCAATGATAATAGCAAGTGGGTTTTACTCTATAATGTGGGGGAAAATAAAAGAAGAGGACTTGAAGGGACAGGATGGCTTCTCAAGCTTGAAGTCTTCATCAACAGATAAGATTCCATTGTTGAAAAGCTGTAAAGTTCAAAATGACTAA 1089 45.27 MDRSFLYNQFAPLAGMIAAECATVGSNTVYKAISGHEISFYVFTFYTCLAAALVLLPFALIFRRSGVFPSDKLSFFLRLISLSAMGVGCQLFSYKGLEYSSPTLASAISNLIPALTFILAVLFGMEKLALRSSSSIAKIVGSTVSITGALVVVLYKGPVILSNPFSRPTRLNLPPRRLGSSQPNWIMGGLCFFAQYLLNSFWYIVLTQTMNIYPDELVVVCLFYVFEVIIAAPICLLAEGNIGAWKLKNSLEVVAVLNSGCVGQSFVSAIHTWGVHVKGPVYVSSFRPLSIAIAAATGVIFLGDDLHLGSIIGAMIIASGFYSIMWGKIKEEDLKGQDGFSSLKSSSTDKIPLLKSCKVQND 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25757074 25763901 - CaPI482276_10g012340.1 Cam10g1234 137897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1234 362 Pfam EamA-like transporter family 21 146 IPR000620 GO:0016020(InterPro)
Cam10g1234 362 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam10g1234 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
Cam10g1234 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1929 Cam-Chr9:33982146 Cam10g1234 Cam-Chr10:25757074 2.60E-72 dispersed
Cam10g0253 Cam-Chr10:4366707 Cam10g1234 Cam-Chr10:25757074 2.20E-19 dispersed
Cam10g1234 Cam-Chr10:25757074 Cam11g1347 Cam-Chr11:26181227 3.20E-37 dispersed
Cam10g1233 Cam-Chr10:25737891 Cam10g1234 Cam-Chr10:25757074 2.90E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1234 - - - 0.0