Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1281 ATGGCTTCCATTTTCATCCATTCCTCAAACCAATTTCCAATCCATGGAGCTCCCTTCTTCTTCTTCTTCTTCCTTTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATCTCGGAATCCGGTAGCTTCTGTGGAAAATTCAAGCCTCCACCCACATCCGGATTCATACCAACCTTCGTCGAAGAAATGGAAGCCATTTCCGAGCTTCTCACAACTCGCAGTTGGACCACTCACTTCGTCAATTCCACTCCCCCAATGTTCGCTTTATCCCAATGCTTCAAAGATCTCTCTCACACTGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCGCCCTTCCCCGCTGCCTCCCTGCCGTCTCTGCCCGGATTTTCCTCGACGGATGCTTCCTCCGGTATGACAATTACAGCTTCTATAAAGAATCCACTGATTCGCTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGAAAATCGATGAATCTGAGAGGCTAGGGTTTGGGAAGAACGTTAGGCTTGTTGTTGAGACTGTGACGAGGACGGCCATGGAGAATGGCGGATTTGGGATTGGGGAAGTTAATGGGATGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAGGGATGCAGAGCTTGCTTGGAGAAGGCGAAGAGGAGTATCAGGAGCTGTTTGCCGAGTAGAGAAGGGAGAGCTATGAATGCTGGGTGTTATTTGAGATATTCGACTGTGAAATTCTATAACGATAAGGATGAAGATCGGGATCATGATGGAATTTCTGGAAGGAGAGCAGTAGTTACCATTGCCTTAGCTTCAGCTGCCTCCTTGATCATCTTCTTTTCAGCTGTGTTTGCATGCTATACAAGAATAACAAAGTTCAAGAAAGAAAAGAAAAAGCAATCACTTATTCCAACTTCCTTCAAGGATTCCAATTTGAATTACAAATATGAAACACTTGAAAAGGCAACTAATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAATGGGCAGGTTGTTGCTGTGAAGAGATTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTAATCCGCGGAATCCAACACAAAAACCTTGTTGCCCTTTTAGGTTGCAGCATTGAAGGGCCTGAAAGTCTGCTGGTCTATGAGTATGTTCCGAACCGGAGCCTTGATCAGTTCATTTTCGATAAGAACAAGGTTCAGATTCTAAATTGGAAACAACGTTTTAATATTATTGTGGGAACAGCTGAAGGGCTTGCACATCTTCATGAAGGTTGTAAAATAAGAATAATCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAAAATTTCAATCCGAAGATTGCGGATTTTGGCCTCGCTCGGCATTTTGCAGCCGATCAGTCTCATCTTAGCACAGGAATTGCCGGGACACTGGGTTACATGGCTCCTGAATATCTCGTTCGAGGACAACTTACAGAAAAGGCTGATGTTTATAGTTTTGGAGTGTTGATACTCGAGATCGTTTGTGGTAGAAGAAACAGCTCCTTCACTGAGAATTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGAGAGATTAACTGAAGCCATTGACACAAGCCTGAACAAGGATTACCCTGCAAAAGAAGCCAGGGATGTTCTGCAAATAGGGCTTTTATGCACACAAGCTCTAGCTTCGTTAAGACCGTCAATGGCAACAATCGTGAAACTGCTAACCAGTGATGTAGAAAGGAAGGTTGCCATCCCTGAACAACCTCCATTTTTGAATCCTTGTGGACCTTCAAGAAGGTCTTGCAGAATTAGCAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAACTTGCCTTCAAGAAGTGGAGATTTTGCTGAATTGAGTTCAAACTGA 1989 44.29 MASIFIHSSNQFPIHGAPFFFFFFLFFSVSLSDPRISESGSFCGKFKPPPTSGFIPTFVEEMEAISELLTTRSWTTHFVNSTPPMFALSQCFKDLSHTDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSELGKIDESERLGFGKNVRLVVETVTRTAMENGGFGIGEVNGMFGLAQCWGSVEPEGCRACLEKAKRSIRSCLPSREGRAMNAGCYLRYSTVKFYNDKDEDRDHDGISGRRAVVTIALASAASLIIFFSAVFACYTRITKFKKEKKKQSLIPTSFKDSNLNYKYETLEKATNYFNPSSKIGQGGAGSVYKGTLPNGQVVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQSHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTSLNKDYPAKEARDVLQIGLLCTQALASLRPSMATIVKLLTSDVERKVAIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSTDSGSSSNLPSRSGDFAELSSN 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26241173 26244235 + CaPI482276_10g012810.1 Cam10g1281 137944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1281 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g1281 662 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Cam10g1281 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 177 623 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam10g1281 662 FunFam Cysteine-rich receptor-like protein kinase 2 292 400 - -
Cam10g1281 662 MobiDBLite consensus disorder prediction 637 662 - -
Cam10g1281 662 CDD STKc_IRAK 331 594 - -
Cam10g1281 662 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Cam10g1281 662 Pfam Salt stress response/antifungal 75 134 IPR002902 -
Cam10g1281 662 Gene3D - 153 245 IPR038408 -
Cam10g1281 662 Gene3D - 57 136 IPR038408 -
Cam10g1281 662 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Cam10g1281 662 ProSiteProfiles Protein kinase domain profile. 325 610 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1281 662 FunFam Cysteine-rich receptor-like protein kinase 3 147 245 - -
Cam10g1281 662 Pfam Protein kinase domain 327 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1281 662 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Cam10g1281 662 SMART serkin_6 325 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1281 662 ProSiteProfiles Gnk2-homologous domain profile. 145 245 IPR002902 -
Cam10g1281 662 ProSiteProfiles Gnk2-homologous domain profile. 36 136 IPR002902 -
Cam10g1281 662 FunFam Cysteine-rich receptor-like protein kinase 42 62 136 - -
Cam10g1281 662 Gene3D Transferase(Phosphotransferase) domain 1 401 604 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2249 Cam-Chr8:27634786 Cam10g1281 Cam-Chr10:26241173 1.20E-132 dispersed
Cam10g1281 Cam-Chr10:26241173 Cam10g2162 Cam-Chr10:35118581 6.60E-73 dispersed
Cam10g1281 Cam-Chr10:26241173 Cam05g2747 Cam-Chr5:34734828 2.00E-154 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85496 PF00069 Pkinase 8.60E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1281 - - - 0.0