Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1336 ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAACAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCACCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTGGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCGGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTGAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCACGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTGA 717 45.89 MELVSEKRDFDSSNDNNKLNSAQPLLDSSYQPSPADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26895584 26905417 - CaPI482276_10g013360.1 Cam10g1336 137999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1336 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cam10g1336 238 MobiDBLite consensus disorder prediction 15 36 - -
Cam10g1336 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cam10g1336 238 SUPERFAMILY eIF4e-like 35 234 IPR023398 -
Cam10g1336 238 MobiDBLite consensus disorder prediction 1 46 - -
Cam10g1336 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 231 IPR023398 -
Cam10g1336 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 35 226 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cam10g1336 238 FunFam Eukaryotic translation initiation factor NCBP 31 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0743 Cam-Chr6:10050827 Cam10g1336 Cam-Chr10:26895584 4.10E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1336 K03259 - csv:101204290 480.715