Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g1379 | ATGCTGATCGATACCTCTGCAATTTCCGGCGAAATTGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTCGTGAAGCTTCTTCTTGAGAAGGGCTACACTGTTAGAGGAACCGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGAACTTAGAAGGAGCTAAAGAGAGATTGTCTTTGTTTAGTGCTGATCTCCTTGATTTTGACAGCCTTAAAGCAGCCATTTTGGGCTGTCATGGTGTTTTCCACACCGCGTCTCCTGTGACCGATGACCATGAAAAAGTGGAACAAGCCATAATTGGAACAAAGAACGTCATGACTGCTGCCGTTGAAGCAAACGTTCAACGTGTGGTCTTCACGTCGTCGATCGGGACCGTCTATATGAACCCTAACCGACACCCAGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTACTGCTATGCAAAGACAATGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAGAGGAGTTGATCTTGTAGTTGTAAATCCAATGTTGGTGTTGGGACCTTTGTTGCAAGAAGGTGTGAATGCTAGTGTAGTTCACATAATGAAGTATTTAACGGGATCAGCAAAGACATATGTAAATGCAGTTCAAGGTTATGTTGATGTTAAGGATGTTGCAAAAGCCCATATTTTGGTTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTAAAAACTTCTTCCCTCAGTATCCTCTTCCTACCAAGTGTGCTGATGAGATAAATCCCAGAAAGAAACCTTACAAGTACACAGTTGAGAAGCTAAAGTCATTAGGAATGGAATTCACACCAATCAAACAATGCATATATGAAACTGTAAAGAGCCTACAAGACAAGGGTCATCTTCCACTTCCTTCCCAACTTCAACATTGA | 990 | 42.73 | MLIDTSAISGEIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKNLEGAKERLSLFSADLLDFDSLKAAILGCHGVFHTASPVTDDHEKVEQAIIGTKNVMTAAVEANVQRVVFTSSIGTVYMNPNRHPDTVVDESCWSDLEFCKNTKNWYCYAKTMAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHILVYETPSASGRYICVESMLHRGELVDILKNFFPQYPLPTKCADEINPRKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQDKGHLPLPSQLQH | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 27362776 | 27371293 | + | CaPI482276_10g013790.1 | Cam10g1379 | 138042 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g1379 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 315 | IPR036291 | - | |
Cam10g1379 | 329 | CDD | FR_SDR_e | 13 | 298 | - | - | |
Cam10g1379 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 13 | 314 | IPR050425 | GO:0016616(PANTHER) | |
Cam10g1379 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 244 | IPR001509 | - | |
Cam10g1379 | 329 | Gene3D | - | 3 | 329 | - | - | |
Cam10g1379 | 329 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam10g0714 | Cam-Chr10:11731215 | Cam10g1379 | Cam-Chr10:27362776 | 1.50E-62 | dispersed | |
Cam10g1377 | Cam-Chr10:27343002 | Cam10g1379 | Cam-Chr10:27362776 | 1.80E-156 | dispersed | |
Cam10g1379 | Cam-Chr10:27362776 | Cam11g1922 | Cam-Chr11:31634104 | 1.10E-73 | dispersed | |
Cam10g1378 | Cam-Chr10:27358474 | Cam10g1379 | Cam-Chr10:27362776 | 6.00E-176 | tandem | |
Cam10g1379 | Cam-Chr10:27362776 | Cam10g1380 | Cam-Chr10:27374307 | 3.80E-146 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g1379 | K09753 | - | csv:116401668 | 615.535 |