Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1389 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTGCTTCTGCTGTTAATCTTAGGGAGGCAATTAATAATCGACCATCAGCCTCTGGCAGGGTACCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGGGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCACGTGATTTGCGGTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTAGTCAATCTAGAGCAGATTCGATGTATTATAACAGCTGATGAAGTTTTGCTGTTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTAGAGCTACAAAGGCGATTGAAGACTACTGGGGTTGATGAGGTTTGGCAGAATGATGCAAATCATGGTGCTGACTTAAACCGAAGAAGGGGAAGTAGGAATTTTGATAATGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAGTTTAGAGCTTTAGAAGTTGCTTTGGAAGCAGCATGTACATTTCTTGATTCCCAGGCTGCAGAATTAGAAATCGAAGCATACCCATTGCTAGACGAACTTACGTCAAAAATCAGTACATTAAATTTGGAGCGGGTCCGTCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGATGATGGAGATATGGCAGAAATGTACCTCACCGAGAAGAAAATGAGAATGGAGTCCTTTGTTTATGGTGATCAGTCTGTGAGTGGATACAGATCAATTGATGGAGCGTCTATTTCTGCTCCTGTTTCTCCTGTATCATCTCCACCCGAAACTCGCAGGCTTGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGCATGAGAAGTTCAGAAAGTACCACTGAAAATATAGAGGAGCTCGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATCAACATCCAGTTGGATAATGTACGTAATCAGTTGATTCAGTTTGAGCTACTGCTGACTACCGCAACATTTGTTGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGGATCCTGATGCATTCAAGTGGGTTCTTCTAATTACAGGAGTAAGTGGAATTGTCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGGCTGATGCCACTTTAA 1344 42.49 MADLKERLLPPKPASAVNLREAINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDANHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVSGYRSIDGASISAPVSPVSSPPETRRLEKSLSIARSRHESMRSSESTTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGDPDAFKWVLLITGVSGIVIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27538192 27541409 - CaPI482276_10g013890.1 Cam10g1389 138052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1389 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cam10g1389 447 FunFam Magnesium transporter MRS2-1 41 124 - -
Cam10g1389 447 Pfam Magnesium transporter MRS2-like 326 375 - -
Cam10g1389 447 Pfam Magnesium transporter MRS2-like 57 270 - -
Cam10g1389 447 Gene3D - 41 124 - -
Cam10g1389 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cam10g1389 447 Coils Coil 228 255 - -
Cam10g1389 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cam10g1389 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 444 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cam10g1389 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cam10g1389 447 FunFam Magnesium transporter MRS2-1 385 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0728 Cam-Chr2:8800409 Cam10g1389 Cam-Chr10:27538192 7.60E-90 dispersed
Cam06g0667 Cam-Chr6:8992920 Cam10g1389 Cam-Chr10:27538192 3.80E-89 dispersed
Cam08g1494 Cam-Chr8:21177464 Cam10g1389 Cam-Chr10:27538192 1.20E-106 dispersed
Cam10g1389 Cam-Chr10:27538192 Cam07g0060 Cam-Chr7:1741241 3.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1389 K16075 - csv:101217419 825.083