Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1392 ATGGAGAAGAAGACTTATCCGATTGGCGAAGATTATTATATTCTGTATGAGGAGGTCGGGCAGGGTGTGAGCGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAACGAGATCGTCGCCATTAAGATTCTCGATTTTGAGCGTGAGAATTGTGATCTGGCTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCGAATGTCCTTAAATCACACTGCTCTTTTGTCAATGGCCATGATTTGTGGATTGTTATGCCCTACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTCATAGCAACAGTATTGCGAGAAGTATTGAAGGGGGTTGAATATCTTCATAATCATGGACATATACATCGGGATATCAAAGCAGGGAATATTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCGGCTTGTCTTTTTGATTCAGGTGATCGACAACGTGTGAGGAATACATTCGTGGGGACACCTTGCTGGATGGCACCTGAGGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCCATAACTGGGTTAGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAATATCCTCCGATGAAGGTACTGATGATGACCTTGCAAAACGCACCTCCAGGGCTTGATTATGAGAGGGATAAAAAATTCTCAAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGGCCTTCTGCAAGTAAGCTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAATGATTACATTGCACGCACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTCAAGAGAAAAGAAGAAGATATGCTAGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGCATCAGTGGATGGAACTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAGTCAATAAGTGAAATCAGTGAAGTAGGGAGCTCAAATTCCTTATGTGCACTTGATGTGCAAGAAAAGAAATTACAAGGCCAAAATTCTTCAGAAATTTCAGATAATGAAGAGAATGGCATGCTGCGGAGACAACCCTCCATGAAAGCAAATGACACAGTAGAGGGTAAAAAATCTATCAATGAATCAACAATTATTGGTTCTTCCTCTCAACATTATTCTTCACCCATTGAGAATGGCTCCAGTGAGGAGTTTCTTTTGGAGAGCAGCAAAAGAATTTTGGGGAATACTCCTAATTCTAGCCAACATAAAAGAAGTATTTCTTCTAATACCGCTATTCAACAAGAAATCAGTTCACCACTGAACAGAAGAGAGAGTTATGAGACAGAAAAGAATGGTGCAAATGGCAGTCTTGCAATTGGAATGACTTCTCAGGCGGTAGATGATGTACTTTCTGATTCTCATTCTAAAGATCCCAAGTCATCATTAAGTCCAGCAACAAATGACGAGGAGCAGGATGAGAAAGCAAAGGCACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAGTGTTGATGTAGAAAAGGCAGCTGCATTCCCTATTTTGCAAAAAAGTCACAGCATGCAGGTGATTACCTCAAATTCTGCTACTCCTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCTTCATCTGATGCTATACCAATTAATACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAAAGGGATGATATTTTGACTCTAATGAGGCAAATCGCAATCGGAGAATTTTCAGCTGATGGCGTAGTTGATGTCTCAGCGGCCCATATAACAGCAACGGAAAAATCTTTGCTTGAAGCAGCTCATGAAAGGGAGAAGGATTTACTTAACGAAGTAACTGAGTTACAGTGGAGGAAGAAGAAATGTAAGGCAGTAAAGGATGATATGATGAGAGAAGAAGGTAACCTTACAGGTCATTTCCACTGTAGTATTGTTCTTCGGCTTGATATGGTTTTCTTCAAAGCTGTGTTCCTTCTCCTGTTTCAGTATCTGGTTTTGAATTCTGGGACTCCAGTTATTATAGGTCACCACTACCCTCCTCATAAGTCCTTGCTCACTGATAAAGCAGCCCTCCTTGGCTTCAGGAAGTGCATCATACACGACCCCACTTCCACTCTAGCTAACTGGATTGAGGCTATTGATGTATGCAACTTCACTGGTGTTGCTTGTGACCGACACCGTCATCGGGTATCAAAGCTCAGCTTGATTGATGTTGGACTTGTGGGAAAGATTCCACCCTTCCTCTCCAATCTCACGGGTCTTCGAATTCTGGATATTGTTAACAGTTATCTTTTTGGGGAAATTCCTTCTGAACTTTTTTCTCTTCGAAATCTTCACCGCCTTCGCCTCGACAGCAACAGTTTGGAAGGTCCCATACCAACTTCCCTTGCTAGTTTGTCCAGGCTTACTGTAATAAGTCTTAGGGAGAACAGGCTAAATGGAACAGTTCCATCTTCTCTTTTTTCTAATTGCACGTCGTTGCTTAATGTAGACCTTTCCAACAACTTCTTAACAGGAAGAATTCCAGAAGAAATTGGAAATTGTCCAAAGCTGTGGAATCTCAATCTGTACAACAACCAGTTCAGTGGACATCTTCCTCTTTCTTTAAGAAACACTTCGCTCTATAACTTGGATGTCGAATATAATCATCTTTCTGGCGAACTGCCTGCAGTGCTTGTAGAAAACCTGCCTTCACTTAGCTTCCTTCATTTATCAAATAATGATATGGTAAGCCACGATGGAAATACCAATCTTGAACCGTTCATTACTTCTCTTAGAAACTGCAGTAGTTTAGAGGAGCTTGAATTGGCTGGGATGGGGCTTGGAGGGAGGCTGCCCAGTTCTATTGGTCATCTGGGTGTCAATTTTTCAGTTCTGTCTTTGCAGGAAAACCAGATATTTGGATCAATTCCTCCAAATTTAGCCAAGCTTTCCAAACTTGCAGGGCTGAATTTGACATCAAATCTACTAAACGGAACAATTCCTGCAGAGATAAGCAGGTTGTCAAAATTGGAGCAGCTTTTCTTATCACACAACCTCTTCACTTCAGACATTCCAGAAGCATTAGGCGAGTTGCCACATCTTGGATTGTTGGATCTATCTCACAACCAACTTTCAGGAGAAATCCCAGAAAGTATTGGAAATTTAACTCAGATGATTTATTTGTTTCTCAACCACAACCTCTTGTCTGGAACAATACCTTTAGCGTTGGTAAAGTGCACAGGTCTACAAAAGCTGGACTTATCTTTCAACATGTTATCTGGAAGTATTCCTCGAGAGATCTTAGGCTTGCAAGAGATAAGAATTTTTATCAACCTTTCTCATAACAATTTTCAAGGAAACTTGCCCATTGAGCTTAGCAAGCTGAAAAATGTTCAAGAGATGGACCTTTCATCCAATAACCTCACTGGAAGCATCTTCCCTCAGATATCAAGTTGCATTGCACTGAGGTTACTAAATTTTTCAAATAATTCCCTCCAAGGTCATCTTCCAGATTCCCTAGGTGAACTCGAGAACCTTGAATCATTTGACATTTCAAAAAACCAATTGTCAGGCATGATTCCAGCCAGTCTAGGTAAGCTCCAATCTCTCACTTACCTGAATCTTTCATTCAATAACTTCCAAGGAATGATTCCAAGAGAGGGATTTTTCAAATCATCCACACCTCTCTCATTTTTGAACAATCCACTCCTTTGTGGGACAATTCCTGGAATGCCAGCCTGTTCTGGCAAGAGAAATCGGTTTCAATCACCTGTATTCTTGACTATATTCATTTTAATCATATGCATATCATCTTTCTTATCAACAATATGCTGTGGGATTGCTTGTCAACGTCTAAAAGCAATTGTTTCAGCACGAAATAGTGAGTCATCAAGGAGATCAAAGATGCCAGATTTTATGCACAATTTTCCAAGAATAACAAGCAGGCAACTATCAGAGGCCACTGGAGGTTTTGATGAACGGAGACTAATTGGTTCAGGCAGCTATGGACAAGTCTATAAAGGCGTTCTTCCAGATGGAACAACTGTAGCTGTTAAGGTTTTGCATACACAATCTGGAAACTCCACAAAGAGTTTTAACAGAGAATGCGAAGTTTTGAAGCGAATTCGCCACAGAAACCTTATAAGAATTATAACAGCTTGTAGTCTTCCGGATTTTAAAGCTCTAGTTCTACCATATATGGCAAATGGAAGCTTGGATAACCATCTATATCGACGTTCACCTACCAGCTCGGCTTCGGGTTCTTCAGATTTAAACCTTATTGAGAGGGTGAATATATGCAGTGATATAGCTGAAGGAATGGCATACCTGCATCATCATTCTCCAGTCAGAGTCATACACTGTGATTTAAAGCCAAGTAATGTACTTCTAAAGGATGACATGACAGCCCTTGTTTCTGACTTCGGGATCTCAAGGCTAATGACCCCTGGAATTGGAAGCGCAACTGTTGAAAACATGGGAAAGTCAACTGCAAACATGTTAACTGGATCAATTGGATATATTGCACCAGAGTACGGATTTGGTTCTACAGCCTCCATGAAAGGAGACGTTTACAGCTTCGGCGTGCTAGTTCTAGAGATGGTAACAAGAAAAAGGCCAATAGACGACATGTTTGTTGAAGGGCTAAGTTTACATAAGTGGGTGAAGAATCATTACTACGGCAGAGTAGAAAAAGTAGTGGATTATTCTCTACAGAGAGCTTCGAGAGATGAATCACCTGAAATGAAGAAAATGTGGGAAGTGGCAATCCGAGAGCTAATCGAATTAGGTTTGCTCTGCACTCAAGAATCTCCATCCACAAGACCAACAATGCTGGATGCTGCTGATGACTTGGATCGATTGAAGAGATACCTTAATGGTGGCGACACCACAACAACATTTGCTTCATCACTTGGAATTTCGTCCTCCACTCTTGGCGATGACTCCAATTACTCCCCACAAATCGCCGTTGACAGAAACATCTAG 5124 41.14 MEKKTYPIGEDYYILYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLASIYREVQTMILVDHPNVLKSHCSFVNGHDLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATVLREVLKGVEYLHNHGHIHRDIKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKVLMMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSNDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSNSLCALDVQEKKLQGQNSSEISDNEENGMLRRQPSMKANDTVEGKKSINESTIIGSSSQHYSSPIENGSSEEFLLESSKRILGNTPNSSQHKRSISSNTAIQQEISSPLNRRESYETEKNGANGSLAIGMTSQAVDDVLSDSHSKDPKSSLSPATNDEEQDEKAKAPVIQQKGRFKVTSESVDVEKAAAFPILQKSHSMQVITSNSATPLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQRDDILTLMRQIAIGEFSADGVVDVSAAHITATEKSLLEAAHEREKDLLNEVTELQWRKKKCKAVKDDMMREEGNLTGHFHCSIVLRLDMVFFKAVFLLLFQYLVLNSGTPVIIGHHYPPHKSLLTDKAALLGFRKCIIHDPTSTLANWIEAIDVCNFTGVACDRHRHRVSKLSLIDVGLVGKIPPFLSNLTGLRILDIVNSYLFGEIPSELFSLRNLHRLRLDSNSLEGPIPTSLASLSRLTVISLRENRLNGTVPSSLFSNCTSLLNVDLSNNFLTGRIPEEIGNCPKLWNLNLYNNQFSGHLPLSLRNTSLYNLDVEYNHLSGELPAVLVENLPSLSFLHLSNNDMVSHDGNTNLEPFITSLRNCSSLEELELAGMGLGGRLPSSIGHLGVNFSVLSLQENQIFGSIPPNLAKLSKLAGLNLTSNLLNGTIPAEISRLSKLEQLFLSHNLFTSDIPEALGELPHLGLLDLSHNQLSGEIPESIGNLTQMIYLFLNHNLLSGTIPLALVKCTGLQKLDLSFNMLSGSIPREILGLQEIRIFINLSHNNFQGNLPIELSKLKNVQEMDLSSNNLTGSIFPQISSCIALRLLNFSNNSLQGHLPDSLGELENLESFDISKNQLSGMIPASLGKLQSLTYLNLSFNNFQGMIPREGFFKSSTPLSFLNNPLLCGTIPGMPACSGKRNRFQSPVFLTIFILIICISSFLSTICCGIACQRLKAIVSARNSESSRRSKMPDFMHNFPRITSRQLSEATGGFDERRLIGSGSYGQVYKGVLPDGTTVAVKVLHTQSGNSTKSFNRECEVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLDNHLYRRSPTSSASGSSDLNLIERVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLKDDMTALVSDFGISRLMTPGIGSATVENMGKSTANMLTGSIGYIAPEYGFGSTASMKGDVYSFGVLVLEMVTRKRPIDDMFVEGLSLHKWVKNHYYGRVEKVVDYSLQRASRDESPEMKKMWEVAIRELIELGLLCTQESPSTRPTMLDAADDLDRLKRYLNGGDTTTTFASSLGISSSTLGDDSNYSPQIAVDRNI 1707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27576085 27593581 - CaPI482276_10g013920.1 Cam10g1392 138055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1392 1707 Gene3D Transferase(Phosphotransferase) domain 1 1447 1678 - -
Cam10g1392 1707 SMART LRR_typ_2 1054 1077 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 852 876 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 1247 1271 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 1078 1102 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 1126 1150 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 1175 1199 IPR003591 -
Cam10g1392 1707 SMART LRR_typ_2 1223 1246 IPR003591 -
Cam10g1392 1707 Pfam Leucine Rich Repeat 1129 1149 IPR001611 GO:0005515(InterPro)
Cam10g1392 1707 Pfam Leucine Rich Repeat 1177 1199 IPR001611 GO:0005515(InterPro)
Cam10g1392 1707 Pfam Leucine Rich Repeat 879 901 IPR001611 GO:0005515(InterPro)
Cam10g1392 1707 ProSitePatterns Protein kinases ATP-binding region signature. 1377 1399 IPR017441 GO:0005524(InterPro)
Cam10g1392 1707 ProSiteProfiles Protein kinase domain profile. 1371 1671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 MobiDBLite consensus disorder prediction 446 530 - -
Cam10g1392 1707 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cam10g1392 1707 SUPERFAMILY Protein kinase-like (PK-like) 1346 1664 IPR011009 -
Cam10g1392 1707 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cam10g1392 1707 Gene3D Ribonuclease Inhibitor 853 926 IPR032675 -
Cam10g1392 1707 Gene3D Ribonuclease Inhibitor 739 852 IPR032675 -
Cam10g1392 1707 SUPERFAMILY L domain-like 1029 1286 - -
Cam10g1392 1707 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1447 1677 - -
Cam10g1392 1707 PANTHER OS04G0122200 PROTEIN 758 870 IPR051809 -
Cam10g1392 1707 Gene3D Ribonuclease Inhibitor 927 1302 IPR032675 -
Cam10g1392 1707 MobiDBLite consensus disorder prediction 404 432 - -
Cam10g1392 1707 FunFam Leucine-rich repeat receptor-like protein kinase TDR 978 1296 - -
Cam10g1392 1707 Coils Coil 651 671 - -
Cam10g1392 1707 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1352 1446 - -
Cam10g1392 1707 SMART serkin_6 1371 1671 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1498 1510 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 MobiDBLite consensus disorder prediction 377 432 - -
Cam10g1392 1707 Pfam Protein kinase domain 1373 1660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1392 1707 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cam10g1392 1707 CDD STKc_IRAK 1377 1667 - -
Cam10g1392 1707 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
Cam10g1392 1707 Pfam Leucine rich repeat 1202 1260 IPR001611 GO:0005515(InterPro)
Cam10g1392 1707 Pfam Leucine rich repeat 1033 1091 IPR001611 GO:0005515(InterPro)
Cam10g1392 1707 CDD STKc_OSR1_SPAK 11 274 - -
Cam10g1392 1707 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cam10g1392 1707 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 777 970 - -
Cam10g1392 1707 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cam10g1392 1707 MobiDBLite consensus disorder prediction 483 502 - -
Cam10g1392 1707 Pfam Leucine rich repeat N-terminal domain 739 777 IPR013210 -
Cam10g1392 1707 SUPERFAMILY L domain-like 739 963 - -
Cam10g1392 1707 MobiDBLite consensus disorder prediction 446 474 - -
Cam10g1392 1707 Gene3D Phosphorylase Kinase; domain 1 1332 1446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1395 Cam-Chr6:25371915 Cam10g1392 Cam-Chr10:27576085 5.00E-15 dispersed
Cam06g1396 Cam-Chr6:25389024 Cam10g1392 Cam-Chr10:27576085 3.80E-109 dispersed
Cam09g1954 Cam-Chr9:34212468 Cam10g1392 Cam-Chr10:27576085 1.00E-158 dispersed
Cam10g0085 Cam-Chr10:2438802 Cam10g1392 Cam-Chr10:27576085 9.70E-142 dispersed
Cam10g1392 Cam-Chr10:27576085 Cam10g2097 Cam-Chr10:34640480 4.30E-68 dispersed
Cam10g1392 Cam-Chr10:27576085 Cam05g0511 Cam-Chr5:4563062 7.90E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85504 PF00069 Pkinase 7.10E-42 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1392 - - - 0.0