Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g1489 | ATGTCTCGCCAAGTTCCGACCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTAGGAGATGAGATCGGAAAAGGAGCATATGGACGAGTCTACAAGGGTCTGGACTTGGAGAATGGGGACTTCGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGCAAGAGATTGACTTACTGAAGAACTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTTTGAAAACAAAGACTCACCTTCACATAATACTCGAGTATGTGGAGAATGGATCACTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCGTTGGTTGCTGTTTATATCTCTCAGGTTCTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGGGACATAAAGGGTGCGAACATACTGACAACCAAAGAGGGCCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCCGATGTTAATACTCATTCAGTTGTTGGAACACCTTACTGGATGGCACCTGAGGTAATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATATGGAGTGTTGGATGTACTGTGATTGAACTACTTACATGCGTACCTCCGTATTATGATCTACAGCCTATGCCCGCTCTCTTTCGCATTGTGCAGGACAAGCATCCTCCAATTCCAGATAGCCTATCACCAGATATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCGGATGCAAAAACTTTGCTTTCTCATCCTTGGATACAGAACTGTCGACGGGCTTTGCATTCTTCTCTTCGTCATAGTGGCACATTAAGAAACACTCAACAAGATGGATCAATTGAAGCAGAAATTTCTAACGGAGACAATCAAAACTCTTGCGAAAGCCCTTCGGCAGAGAAAAATGAAGTCACTGATTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGTCATCAGATGATGCCACTGATGCGAGCAAGTCCCAAAAGCATTTTGCTTCAGGCCCTAATTTTGTTGAGGAAGGAGAAAGTCTAGAAGAAGATACCCTATTGGATCAGGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAGACTTACTACCTCTGAGCCGACTGAGTTTCATGAATCTCATGGTAGAGGCCATGATGAAGTGATAGTGAATGGTGAACTGCCATTGGCAGAATTAAGGAAAGATGCTCCTAGAAAACATGGAGAGAAAGAAACTTCTACAACATCTGGAAGTAGATCATTTGGTTTTGAACCTGAAAGTCAGGACAATAGTTTTCAAAAGGTGTCAAAGATGTCAATTGCTTTGGGAGGAGATGAGCTGAGTAAATTTAGTGACACTCCTGGAGATGCTTCCTTGGATGATTTATTCCAACCTCTAGATAAGCACCCCGGGGATCAAGCTGCTGGAGCATCAACATCTCTATCTACTCTACAATCAAACATGGGTAATGTGCCAGTAAATGATGTTGGGAAAAATGACCTGGCCACAAAATTGAGGGCTACAATTGCTCAAAAACAAATGGAAAATGAAATGGGACAGGCAAGTGGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAAACCTTTTCCCTTTGCAGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCTATCTTTCATCAAAGACCGGAGCAGAAAATTGTATATGTTACACAGCATGGTCTACTCCCGTTAACTGAGTTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAATGTTGACTTCCAAGAAAATGCCTGTCTTGTTGGTCTAATTCCTCTGGTAATGGGGTTTGCAGTTCCTGATCGTCCCCGAGAAGTCCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTCGCGTGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGACTATGCAAAGTACAGGGACATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACGCTCTACAGCTTAAATGAGGCAACTCGCTTAGCTTCCATAACAGTTGGGGCGGGATATCCAGTTGATGGTTTAACTCAACGGCCACGATCAGGTCAACTAGATCCTAGCCACCCTATATTCAGTCAGTATGAGGCCTCATTTCCTATGCCTGATCAACCTGATCTTTTGAAGGTCAAACATGGAATAGTTGATCATCACCCATCTTCTGGACCACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGCCAATCAATCTGAGAACCGACGCTTTTCCATAGATGCTGATAGGCCTCAATCTAGTAATGCCACAAATGAAGCCTTGGGATCTAAACCGTCAGAGCTTGCGTCTTTGGATAAGGTTTTACATTTAGCAAGCAAGGAATCGTCTGGCTTGGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGAACTGAGCGAATGACGAACTCTAATAGGACTTCCACAGATAGGCCTCCAAAATTGGTGGAACCTGCATCTAATGGATTTCCTACAACATTGGCGGCTACTCAACAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCGTCTCGACATTTTTCCGGTCAGCTTGAGTACATGCGCCAACTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCAAATGAAAAGAAGATAAATGGGGAGCATGATTTCTTAATGGCAGAATTCGCTGAGGTTTCTCAACGTGGAAAAGACAATGGAAATGTTGACCCCACTTCTAAGATTTCTCTTAAAACGGTGGCAAAGAAGGTAGGGCCCTTGATTTCCAATGAGGGAGCTGCATCCACATCTGGAATTGCTTCACAGACAGCATCTGGGGTACTTTCAGGTTCGGGCGTATTAAATGCTAGACCAGGGAGTGCAACATCCTCTGGACTTCTTTCGCACATGGTTTCAACTCTGAACGCTGATGTTGCAAGGGAATATCTGGCTAAGGTGGCTGATCTATTGCTCGAGTTTGCTCAAGCAGATACAACTGTGAAGTCATATATGTGCAGCCAAAGCTTGCTTAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCCCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACGGATCCAAATTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCGAACCTTGAACTCAAAGAAGGGTCGTTGGTGTCGCAAATACATACTGAGGTCCTCAGTGCACTATTCAATTTGTGCAAGATAAATAAGAGGAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTAATGCATTTTATTATTTCAGACTCTCCTCTGAAACAATATGCATTGCCTCTACTGTGTGATATGGCCCATGCATCTCGTAATTCCAGGGAGCAGTTAAGAGCCCATGGTGGATTAGATGTGTATTTGAGCCTACTTGAGGATGACCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAACCGAAAAGTTGAACAAGCATTGCTGAAAAAGGATGCAGTTCAGAAATTGGTGAAGTTTTTCCAGTGCTGTCCAGAACAACATTTTGTCCATATATTGGAGCCTTTCTTGAAAATCATCACGAAATCTTCCCGAATCAATACGACATTGGCTGTCAACGGATTGACCCCGTTGCTTATAGCAAGGCTGGACCACCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATAAAGGCTGTGTATGAGCATCATCCACGACCAAAGCAGTTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGGGATGGACAACGGTCTGGAGGGCAAGTGTTGGTGAAACAAATGGCCACATCTCTGCTTAAAGCTCTTCATATAAATACTGTTTTGTAA | 4269 | 42.4 | MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNTQQDGSIEAEISNGDNQNSCESPSAEKNEVTDSDFKADSRKELSSDDATDASKSQKHFASGPNFVEEGESLEEDTLLDQVPTLSIHENSSLLTGSGRLTTSEPTEFHESHGRGHDEVIVNGELPLAELRKDAPRKHGEKETSTTSGSRSFGFEPESQDNSFQKVSKMSIALGGDELSKFSDTPGDASLDDLFQPLDKHPGDQAAGASTSLSTLQSNMGNVPVNDVGKNDLATKLRATIAQKQMENEMGQASGGGDLLRLVMGVLKDDDIDIDGLVFDEKLPGENLFPLQAVEFGRLVGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYVTQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRDMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLTQRPRSGQLDPSHPIFSQYEASFPMPDQPDLLKVKHGIVDHHPSSGPPEPSRASTSHSQRSDANQSENRRFSIDADRPQSSNATNEALGSKPSELASLDKVLHLASKESSGLASKEHENVDRWRTERMTNSNRTSTDRPPKLVEPASNGFPTTLAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRQLSGLERHETIMPLLHASNEKKINGEHDFLMAEFAEVSQRGKDNGNVDPTSKISLKTVAKKVGPLISNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDDLWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL | 1422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 28603421 | 28627556 | - | CaPI482276_10g014890.1 | Cam10g1489 | 138152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g1489 | 1422 | SMART | serkin_6 | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | FunFam | MAP3K epsilon protein kinase 1 | 578 | 786 | - | - | |
Cam10g1489 | 1422 | FunFam | MAP3K epsilon protein kinase 1 | 17 | 306 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 380 | 395 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 288 | 355 | - | - | |
Cam10g1489 | 1422 | SUPERFAMILY | ARM repeat | 588 | 782 | IPR016024 | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 842 | 856 | - | - | |
Cam10g1489 | 1422 | PANTHER | ARMADILLO REPEAT-CONTAINING PROTEIN 3 | 311 | 1422 | IPR052441 | - | |
Cam10g1489 | 1422 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 140 | 152 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | FunFam | MAP3K epsilon protein kinase 1-like | 1071 | 1417 | - | - | |
Cam10g1489 | 1422 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 275 | IPR011009 | - | |
Cam10g1489 | 1422 | CDD | STKc_Cdc7_like | 19 | 274 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 420 | 435 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 436 | 454 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 832 | 886 | - | - | |
Cam10g1489 | 1422 | Gene3D | - | 581 | 785 | IPR011989 | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 396 | 410 | - | - | |
Cam10g1489 | 1422 | SMART | arm_5 | 616 | 656 | IPR000225 | GO:0005515(InterPro) | |
Cam10g1489 | 1422 | SMART | arm_5 | 1202 | 1241 | IPR000225 | GO:0005515(InterPro) | |
Cam10g1489 | 1422 | SMART | arm_5 | 701 | 744 | IPR000225 | GO:0005515(InterPro) | |
Cam10g1489 | 1422 | SMART | arm_5 | 1156 | 1200 | IPR000225 | GO:0005515(InterPro) | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 469 | 502 | - | - | |
Cam10g1489 | 1422 | Gene3D | Transferase(Phosphotransferase) domain 1 | 17 | 314 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 869 | 885 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 900 | 937 | - | - | |
Cam10g1489 | 1422 | SUPERFAMILY | ARM repeat | 1083 | 1396 | IPR016024 | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 904 | 922 | - | - | |
Cam10g1489 | 1422 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 49 | IPR017441 | GO:0005524(InterPro) | |
Cam10g1489 | 1422 | Gene3D | - | 1073 | 1417 | IPR011989 | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 380 | 454 | - | - | |
Cam10g1489 | 1422 | ProSiteProfiles | Protein kinase domain profile. | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | Pfam | Protein kinase domain | 20 | 274 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 320 | 346 | - | - | |
Cam10g1489 | 1422 | MobiDBLite | consensus disorder prediction | 288 | 319 | - | - | |
Cam10g1489 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 200 | 222 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 134 | 152 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 243 | 265 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam10g1489 | 1422 | PRINTS | Tyrosine kinase catalytic domain signature | 96 | 109 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam08g2031 | Cam-Chr8:25951119 | Cam10g1489 | Cam-Chr10:28603421 | 3.20E-49 | dispersed | |
Cam10g1489 | Cam-Chr10:28603421 | Cam11g1184 | Cam-Chr11:23339758 | 4.90E-49 | dispersed | |
Cam10g1489 | Cam-Chr10:28603421 | Cam06g0599 | Cam-Chr6:8128047 | 2.70E-63 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85507 | PF00069 | Pkinase | 1.30E-72 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g1489 | - | - | - | 0.0 |