Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1604 ATGGGAAAGAGTGAAGAAGAACAGCCGCTGCCGGTTGGAGTGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGGGCAGATGCGGCGGCGGTGGGTGCTCTGGGATTCGTAGACTGATTGCGGTGAGATGTGTCTTCTTCCTGTTATTATCGGCGGCTGTGTTTCTTTCTGCTATTTTTTGGCTGCCACCGTTCCTTTCCGATGGAAATTGGCCGGATCGGCCTATTGATTCTGCTTATAGAGATCATGAAATAGTAGCAAGTTTTCATGCTTGGAAGCCAGTTCCTTTTATGGAAAACCATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCGTACCATTTGTCAAGGTGGTTATCCTCTCACTACAATCATTAGGTGGACCAAACGTAACAAAAATTGTTTTTGCGGTAGATTCTGATGCAAAGTATTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGATACCTTTGAAACATTGGTTATAAATGAACCTCCTCTGAGATTGAATGCATCATTATTTGGCAATACATCCTTATTCAAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCCTCTGCAGGCGGCACAGATCTATTTCAACTTCACATTAAATTATTCTATTTATCAAATTCAAGTGAATTTTGATGATCTTACCAGCCAGTTGAGGTCAGGATTACATCTATCTCCTTATGAGAATTTGTATGTTAGCCTATCGAACAAAAGAGGTTCAACAATACATTCCCCCACTATTGTCCAGTCATCTGTTCTGATGGCAATTGGGACTAACTCATCGAAACAAAGGCTAAAACAGTTGGCTCAAACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACTGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATCAGTCCTAAACCACTCTCTTGGTGGTGGTGGCAGTGCTCGGTCACCTTCACCTGCGCCTCTGCCTCATTCTCACCACCACCACCACCATCACCACCACCATCACCACCATCACCACCATTACCACCATCACCACCACCACCACAATCAGGATGCTGCATACTCACCTAGTCCTGGAACAGAGGAGCACAAACATGCACTGAAGAATGGGGTCTCATCTGCTCCCGAAGCTGGTTCATCTCCAGTGGAAAGTCCAACTGCAAATAAAAGAAACTATGAAGCTACTCCGCCTGCTTTTCAATATGGATATAAGAGGTCTTCAAGAAAAGTCAGAAAACAATCTCATTTAGGCCCTATTCCTTCTCGAAGCAGTCCTCCATTGTCACCATTCTTACGAGTAGGCCTGCCAGCACCTGTTTCTGATTCTATTTCTGCTTCAAGTCCACTGTCAGGTGTAGTTCTATCTAGTGTACAGTCTCCAAATACAGGCGGTGGACATGCAGAAAATTTTGAAAGAAGTCCCCCTTCAGTCTTACCACCTCAATTTTCTTCTTCTGTAGGTGTTCGTGTTTATACCATTCGATGGACACTTGTGCTATTTCTACTAGTATGTTCCTTCTTCTTCTCTGCCATGGCGATCACCATCGTTGACCATCAAGTTCCCTCCGATTCCCACAATTTGTTCGACGTAACTTTCGATTCCGAGGAGCCAATTCTCACTCTTCTCACCACTTCACCATCCATGGTAGATGATTGGATATCCGAAACCCTCGCCATTCGAACTCCACCTCTCATCGTCGGCCTCGACATCGAATGGCGCCCTAATAATCGGTCCTACGACAACCCCGTCGCCACCTTGCAACTCTGCATCGGCCGCCGCTGCCTGATTCTGCAACTGATCCACACACCTGAGATCCCTAAATCTCTGTTCGAGTTTCTGGAAAACGAATCCTACACATTCGTAGGAGTGGGAATCGACGAGGATGCTGAAAAGCTCACCTGTGATTACGGATTGAAAGTGGGGAAGAGAGTGGATCTGAGGAATTTGGCTGAGAGTGTAACGGGAAGAGGAGATTTGAAGAATGCGGGATTGAAGAGATTGGGGAAAGAGGTTTTGGGGAAAGAGATTGAAAAGCCGAAGAGGGTGACGCTGAGTAGATGGGATCAACAGTGGCTTACTCTTAATCAGGTTAAGTATGCTTGTATTGATGCCTTTTTTTCGTTTGAGATTGGAAGGTTTTTGCAATCTTCATCCTATTAA 2193 44.69 MGKSEEEQPLPVGVSSSELSDRNVEGRCGGGGCSGIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSDGNWPDRPIDSAYRDHEIVASFHAWKPVPFMENHIFELEDNIFGEIPVPFVKVVILSLQSLGGPNVTKIVFAVDSDAKYSKIPPTSQSLIKDTFETLVINEPPLRLNASLFGNTSLFKVLKFPGGITIIPPQSAFPLQAAQIYFNFTLNYSIYQIQVNFDDLTSQLRSGLHLSPYENLYVSLSNKRGSTIHSPTIVQSSVLMAIGTNSSKQRLKQLAQTITNSHSGNLGLNNTVFGKVKQVRLSSVLNHSLGGGGSARSPSPAPLPHSHHHHHHHHHHHHHHHHYHHHHHHHNQDAAYSPSPGTEEHKHALKNGVSSAPEAGSSPVESPTANKRNYEATPPAFQYGYKRSSRKVRKQSHLGPIPSRSSPPLSPFLRVGLPAPVSDSISASSPLSGVVLSSVQSPNTGGGHAENFERSPPSVLPPQFSSSVGVRVYTIRWTLVLFLLVCSFFFSAMAITIVDHQVPSDSHNLFDVTFDSEEPILTLLTTSPSMVDDWISETLAIRTPPLIVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLIHTPEIPKSLFEFLENESYTFVGVGIDEDAEKLTCDYGLKVGKRVDLRNLAESVTGRGDLKNAGLKRLGKEVLGKEIEKPKRVTLSRWDQQWLTLNQVKYACIDAFFSFEIGRFLQSSSY 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29837398 29846016 + CaPI482276_10g016040.1 Cam10g1604 138267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1604 730 MobiDBLite consensus disorder prediction 316 434 - -
Cam10g1604 730 MobiDBLite consensus disorder prediction 332 360 - -
Cam10g1604 730 PANTHER F20B24.21 1 514 - -
Cam10g1604 730 SMART 35exoneu6 557 726 IPR002562 GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro)
Cam10g1604 730 CDD WRN_exo 554 723 - -
Cam10g1604 730 Pfam 3'-5' exonuclease 560 726 IPR002562 GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro)
Cam10g1604 730 SUPERFAMILY Ribonuclease H-like 563 726 IPR012337 -
Cam10g1604 730 Gene3D - 539 727 IPR036397 GO:0003676(InterPro)
Cam10g1604 730 FunFam Werner Syndrome-like exonuclease 536 726 - -
Cam10g1604 730 MobiDBLite consensus disorder prediction 384 404 - -
Cam10g1604 730 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1141 Cam-Chr5:10624430 Cam10g1604 Cam-Chr10:29837398 1.20E-46 dispersed
Cam10g1604 Cam-Chr10:29837398 Cam10g1605 Cam-Chr10:29847615 6.60E-50 tandem
Cam10g1604 Cam-Chr10:29837398 Cam04g0591 Cam-Chr4:19781570 4.80E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1604 - - - 0.0