Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam10g1610 | ATGGTTCTCTCTCTCATCCTTCTCTCTCTCCTCTTTCTCCTCGTCGCCTACAACCTCTACAACCGCCTCCGGTTCAAGCTCCCTCCAGGGCCACGGCCGCTTCCGGTGGTCGGAAACCTGTACGACGTGAAACCGGTCCGGTTCAGATGCTACGCGGAGTGGGCCAAGCAGTACGGTCCGATCATATCGGTTTGGTTCGGGTCGACGCTGAACGTAGTGGTGTCGAACACGGAGCTGGCAAGGGAAGTTCTGAAGGAGCACGACCAGAGCCTGGCGGACCGGCACCGGAGCCGATCGGCGGCGAAATTCAGCCGGGACGGGAAGGACCTGATTTGGGCGGATTATGGACCTCATTATGTGAAGGTGAGGAAAGTTTGTACAATCGAACTGTTCTCTCCGAAACGACTCGAATCTCTGAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGACATCTTCAACCACTGCACTAATTCTGAGAACTATGGAAAGAGCTTGAAGCTGAGGGAGTTTCTGGGAGCAGTTTCATTCAACAACATCACAAGGCTCGCATTTGGGAAGAGGTTTGTGAATTCCAATGGCGTTATGGATGAACAGGGCTTGGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTGGCTATGGCCGAGCACATCCCTTGGCTCCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCACGGCGCCCGTCGCGACCGTCTCACCCGAGCCATCATGGAAGAGCACACCAAAGCTCGCAACCTGAGCGGCAATGTCAAGAACCACTTCGTTGATGCTCTCCTCACTCTCAAAGACAAGTACGATCTCAGTGAAGACACCATCATTGGCCTCCTTTGGGATATGATCACTGCCGGCATGGACACGACAGCGATTTCAGTGGAATGGGCGATGGCGGAGATCGTAAGAAACCCTAGAGTGCAAAAGAAGGTTCAGGAGGAACTAGACAATGCAATTGGGGTAGATCGGATCATGACAGAGAACGACTTCTCAAATCTTCCATATCTCCAATGCGTCGTAAAGGAGGCGATGAGATTACACCCACCGACGCCATTGATGCTGCCGCACCGATCCAACGCCAACGTGAAGATCGGCGGCTACGACATTCCCAAAGGATCGAACGTGCACGTGAACGTATGGGCGGTGGCACGTGACCCGGCAGTGTGGAAGAACCCGGAGGAATTCCGGCCGGAGCGGTTCTTTGAAGAGGATGTGGACATGAAAGGGCACGATCTGCGACTACTGCCGTTCGGAGCAGGGCGGAGGGTTTGTCCAGGGGCTCAATTGGGGATTAATTTGGTGACATCAATGTTGGGGCACCTTCTGCACCACTTCGAGTGGACGCCGCCGCCGGGGATGAAGGCGGAGGAGATCGACATGACGGAGAGCCCTGGATTGGTGTCGTACATGAAGACGCCGGTGCAGGCTGTGGCCACTCCCAGGCTGCCTTCAGGACTGTACAAACGTGTGCCTGTGGACATGTAA | 1527 | 55.08 | MVLSLILLSLLFLLVAYNLYNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAKQYGPIISVWFGSTLNVVVSNTELAREVLKEHDQSLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDIFNHCTNSENYGKSLKLREFLGAVSFNNITRLAFGKRFVNSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNLSGNVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNAIGVDRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPEEFRPERFFEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPPPGMKAEEIDMTESPGLVSYMKTPVQAVATPRLPSGLYKRVPVDM | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 29893240 | 29897088 | - | CaPI482276_10g016100.1 | Cam10g1610 | 138273 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam10g1610 | 508 | FunFam | Cytochrome P450 | 21 | 499 | - | - | |
| Cam10g1610 | 508 | CDD | CYP98 | 58 | 490 | - | - | |
| Cam10g1610 | 508 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | P450 superfamily signature | 299 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam10g1610 | 508 | Pfam | Cytochrome P450 | 28 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | SUPERFAMILY | Cytochrome P450 | 28 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 308 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 351 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 288 | 305 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1610 | 508 | PANTHER | CYTOCHROME P450 98A9 | 5 | 502 | - | - | |
| Cam10g1610 | 508 | Gene3D | Cytochrome P450 | 21 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2148 | Cam-Chr5:29898608 | Cam10g1610 | Cam-Chr10:29893240 | 4.60E-53 | dispersed | |
| Cam10g1610 | Cam-Chr10:29893240 | Cam11g0022 | Cam-Chr11:1810174 | 8.90E-78 | dispersed | |
| Cam11g1164 | Cam-Chr11:22778958 | Cam10g1610 | Cam-Chr10:29893240 | 2.00E-64 | dispersed | |
| Cam11g1399 | Cam-Chr11:26648301 | Cam10g1610 | Cam-Chr10:29893240 | 8.10E-63 | dispersed | |
| Cam10g1610 | Cam-Chr10:29893240 | Cam01g1962 | Cam-Chr1:32936424 | 1.10E-88 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam10g1610 | K09754 | - | csv:101217257 | 919.842 |