Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam10g1613 | ATGGATATCTTTATTCCGGCGACTTTCTTCCTCACTTTCCTGATCTCTCTTTTCCTTTTCCTTTACTTATCTTCAACGAAGAAATCTCAAAGCCATGAAGGTTTTAAAAACTACCCCATCGTCGGAGTATTGCCCCTGTTCTTATTAAACCGCCACCGTTTTCTGGACTGGACGACGGAGGTCCTCCGCAACTGCAAGACCAACACAGCGGTGATCCGGCGGCCAGGGGACGTCTGCGGCGTTATGACGGCAAACCCACTCGTGGTAGAGCACATTCTGAAGACCCAATTTAAGAATTACCCAAAAGGGGAACGTTTGGTTTCGATTTTGGAGGATTTTTTGGGGAGTGGGATTTTCAATTCCGACGGCGAAATTTGGAGATTTCAAAGGAAAATGGCGAGTTATGAGTTCAATACGAAATCGCTGAGGAATTTTGTTATGGAGAATGTTAAAGTTGAGATACAGAGGAAGTTGATTCCTGTTTTGGAGAAGGCGGCTTCGTCGTCTGAAACAGAGTGTGTTTTGGATTTGCAAAATGTTTTTGAGCGATTTGCGTTTGATAATGTTTGTAAATTGTCTTTCAATTTTGATTCCGGTTGTCTCGGCGGCGAGGATAACGCCGGCGCCGACTTCATGCGCGCTTTTGAGACCGCCGCCTCCCTCACATCCGGCAGGTTTAGGTATGCTATCCCTCATTGGTACAAGGTGAAGAGATTTTTCAACTTGGGATCAGAAAGAAACCTAAAGAAATCCATATCAATTGTTCACAAATTTGCAGATGAAATCATACGCTCAAGAATGGAAGAGAAAACAACCCAAAATAAGGATCAAGATTTATTGTCACGATTCATGGCAAACGAAGATAATTCCCCAAAATTCCTCCGAGACATAATCATAAGCTTTATCCTCGCCGGTGGAGACACCACTTCTTCAGCTCTAACATGGTTCTTTTGGATCTTATCCACCCGACCTGATATCGAACAAAACATCCTTGCAGAGCTTGAAAAAATAAGATCAAGAACACGTAAGGAAATCGGAGAAATGTATAGCTTCGACGAACTCCAAGACATGCACTATCTTCAAGCAGCATTGTCCGAGACTCTCCGGTTATACCCCCCAGTCCCGATTGACTCAAAAGCTTGCCAACGTGACGATATCTTACCCGACGGGACGTTTATTAGGAAGAGTTGGTTTATGATGTACCATGCATATGCAATGGGAAGAATGAAGAGCATATGGGGGGAAAATTGTGAGGAAGTTTTGCCAGAAAGGTGGTTAGAAAATGGGGTTTGTAGGATTGAGAGTCCATTTCAGTTTCCTATATTTCATGGAGGGCCAAGGATGTGTCCAGGAAAAGATATGGCTTATATTCAGATGAAGTCCATAGTTGCAGCTGTGATCCAGAAGTTTGAAGTAAAAATGGTAGAAAAGAAGACTCCAAAACATTTGTTATCACTTACATTAAGGATGGAGAATGGTTTGCAAGTGATGGTCAAAAAGAGGCCCATATATAACGTAAATTAG | 1524 | 42.78 | MDIFIPATFFLTFLISLFLFLYLSSTKKSQSHEGFKNYPIVGVLPLFLLNRHRFLDWTTEVLRNCKTNTAVIRRPGDVCGVMTANPLVVEHILKTQFKNYPKGERLVSILEDFLGSGIFNSDGEIWRFQRKMASYEFNTKSLRNFVMENVKVEIQRKLIPVLEKAASSSETECVLDLQNVFERFAFDNVCKLSFNFDSGCLGGEDNAGADFMRAFETAASLTSGRFRYAIPHWYKVKRFFNLGSERNLKKSISIVHKFADEIIRSRMEEKTTQNKDQDLLSRFMANEDNSPKFLRDIIISFILAGGDTTSSALTWFFWILSTRPDIEQNILAELEKIRSRTRKEIGEMYSFDELQDMHYLQAALSETLRLYPPVPIDSKACQRDDILPDGTFIRKSWFMMYHAYAMGRMKSIWGENCEEVLPERWLENGVCRIESPFQFPIFHGGPRMCPGKDMAYIQMKSIVAAVIQKFEVKMVEKKTPKHLLSLTLRMENGLQVMVKKRPIYNVN | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 29930185 | 29932796 | + | CaPI482276_10g016130.1 | Cam10g1613 | 138276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam10g1613 | 507 | PANTHER | CYTOCHROME P450 | 19 | 494 | - | - | |
| Cam10g1613 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam10g1613 | 507 | Pfam | Cytochrome P450 | 81 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | Gene3D | Cytochrome P450 | 30 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | P450 superfamily signature | 449 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | SUPERFAMILY | Cytochrome P450 | 35 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1613 | 507 | CDD | CYP86A | 69 | 494 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam10g1613 | Cam-Chr10:29930185 | Cam10g1877 | Cam-Chr10:32790805 | 8.00E-103 | dispersed | |
| Cam10g1613 | Cam-Chr10:29930185 | Cam10g1614 | Cam-Chr10:29937769 | 1.90E-221 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam10g1613 | - | - | - | 0.0 |