Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam10g1614 | ATGGATATCTCTGTTCTATCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTCTATCTCTTTCCCTTTACCTTCTCTTCTTCACTTCACCAAACACCAAATCCAAACCCCACCAAGGTTTCAAACACTTCCCCCTCGTCGGAACCTTGCCGCTCTTCTTATTAAACCGCCACCGTTTTCTTGACTGGTCTACTGAGGTTCTCAAAAGCTGCCGGACGAACACGGCGGTGTTCAAGCGGCCAGGGAAAGTCCACGGCGTAATCACCGCGAACCCACTTGTGGTTGAGCATATACTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGGCGAGGAATTTTCAATTCCGACGGCGAAATTTGGAAAGTGCAGAGGAAAACGGCGAGTTATGAATTCAATACGAAATCGTTAAGGAATTTTGTTATGGAGAATGTTAGAGTTGAGGTTCAGAGTAGGCTGTTGCCTATTTTTGGAAAAGCTTGTGAAACGGAGCGGATTTTGGATCTACAGGACGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGATCCTGCTTGTCTCGGCGGCGATGGCACCGCCGCCGCCGAGTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTAAACATAGGATCAGAAAGAACCCTGAAGGAAGCAATAGCCATAGTTCACAAATTTGCAGATGACATCATTTCCTCAAGAATGGAAGAGAAGAAGAGAACCCAAATAGAAAAAGATCAAGATTTATTATCTCGATTCATGGGAGACGAAAACAATTCTCCAGAATTCCTTCGAGACATAATCATAAGTTTCATCCTTGCGGGGCGAGACACCACTTCTTCAGCTCTAACATGGTTTTTCTGGATTTTATCGTCACGACCCGATGTTGAACAAAAAATCCTAACAGAGCTCCAAACAATCCGATCAAGAACACATAAGGAAATCGGAGAAATGTATAGCTTCGACCAACTTCGAGATATGCACTATCTACAAGCAGCATTATCCGAGACACTCCGCCTATATCCACCGGTGCCAGTGGATACAAAAGCTTGTCGAAACGATGACGTATTACCCGATGGGACGTTTATCGGGAAGAGTTGGTTCGTTACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGAGAATTTTCACCGGAAAGGTGGCTACAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGTTTCCCTATATTTCACGCGGGACCGAGGATGTGTTTAGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCAGCTGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAAACTCCAAAGCATTTGTTGTCTTTAACATTGAGGATGGAGAATGGGTTACAAGTGATGGTCAAAAAGAGAGATAGGAGTATGCCCATTTGA | 1545 | 43.75 | MDISVLSVLTLTPFIFLTFLSLSLYLLFFTSPNTKSKPHQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLKSCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEVQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAAAEFMRAFEDAATLSSGRFMYAFPGLYKVKKFLNIGSERTLKEAIAIVHKFADDIISSRMEEKKRTQIEKDQDLLSRFMGDENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILTELQTIRSRTHKEIGEMYSFDQLRDMHYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKNYGEFSPERWLQNGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKTPKHLLSLTLRMENGLQVMVKKRDRSMPI | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 29937769 | 29939706 | + | CaPI482276_10g016140.1 | Cam10g1614 | 138277 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam10g1614 | 514 | FunFam | Cytochrome P450 | 33 | 511 | - | - | |
| Cam10g1614 | 514 | PANTHER | CYTOCHROME P450 | 24 | 501 | - | - | |
| Cam10g1614 | 514 | Gene3D | Cytochrome P450 | 29 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | Pfam | Cytochrome P450 | 81 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | CDD | CYP86A | 76 | 501 | - | - | |
| Cam10g1614 | 514 | SUPERFAMILY | Cytochrome P450 | 38 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1614 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g1926 | Cam-Chr6:30215043 | Cam10g1614 | Cam-Chr10:29937769 | 1.60E-111 | dispersed | |
| Cam07g0071 | Cam-Chr7:1885723 | Cam10g1614 | Cam-Chr10:29937769 | 1.90E-120 | dispersed | |
| Cam09g0446 | Cam-Chr9:4714560 | Cam10g1614 | Cam-Chr10:29937769 | 2.30E-103 | dispersed | |
| Cam10g1476 | Cam-Chr10:28467277 | Cam10g1614 | Cam-Chr10:29937769 | 1.70E-103 | dispersed | |
| Cam10g1614 | Cam-Chr10:29937769 | Cam10g1877 | Cam-Chr10:32790805 | 8.90E-110 | dispersed | |
| Cam10g1613 | Cam-Chr10:29930185 | Cam10g1614 | Cam-Chr10:29937769 | 1.90E-221 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam10g1614 | - | - | - | 0.0 |