Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1614 ATGGATATCTCTGTTCTATCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTCTATCTCTTTCCCTTTACCTTCTCTTCTTCACTTCACCAAACACCAAATCCAAACCCCACCAAGGTTTCAAACACTTCCCCCTCGTCGGAACCTTGCCGCTCTTCTTATTAAACCGCCACCGTTTTCTTGACTGGTCTACTGAGGTTCTCAAAAGCTGCCGGACGAACACGGCGGTGTTCAAGCGGCCAGGGAAAGTCCACGGCGTAATCACCGCGAACCCACTTGTGGTTGAGCATATACTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGGCGAGGAATTTTCAATTCCGACGGCGAAATTTGGAAAGTGCAGAGGAAAACGGCGAGTTATGAATTCAATACGAAATCGTTAAGGAATTTTGTTATGGAGAATGTTAGAGTTGAGGTTCAGAGTAGGCTGTTGCCTATTTTTGGAAAAGCTTGTGAAACGGAGCGGATTTTGGATCTACAGGACGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGATCCTGCTTGTCTCGGCGGCGATGGCACCGCCGCCGCCGAGTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTAAACATAGGATCAGAAAGAACCCTGAAGGAAGCAATAGCCATAGTTCACAAATTTGCAGATGACATCATTTCCTCAAGAATGGAAGAGAAGAAGAGAACCCAAATAGAAAAAGATCAAGATTTATTATCTCGATTCATGGGAGACGAAAACAATTCTCCAGAATTCCTTCGAGACATAATCATAAGTTTCATCCTTGCGGGGCGAGACACCACTTCTTCAGCTCTAACATGGTTTTTCTGGATTTTATCGTCACGACCCGATGTTGAACAAAAAATCCTAACAGAGCTCCAAACAATCCGATCAAGAACACATAAGGAAATCGGAGAAATGTATAGCTTCGACCAACTTCGAGATATGCACTATCTACAAGCAGCATTATCCGAGACACTCCGCCTATATCCACCGGTGCCAGTGGATACAAAAGCTTGTCGAAACGATGACGTATTACCCGATGGGACGTTTATCGGGAAGAGTTGGTTCGTTACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGAGAATTTTCACCGGAAAGGTGGCTACAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGTTTCCCTATATTTCACGCGGGACCGAGGATGTGTTTAGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCAGCTGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAAACTCCAAAGCATTTGTTGTCTTTAACATTGAGGATGGAGAATGGGTTACAAGTGATGGTCAAAAAGAGAGATAGGAGTATGCCCATTTGA 1545 43.75 MDISVLSVLTLTPFIFLTFLSLSLYLLFFTSPNTKSKPHQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLKSCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEVQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAAAEFMRAFEDAATLSSGRFMYAFPGLYKVKKFLNIGSERTLKEAIAIVHKFADDIISSRMEEKKRTQIEKDQDLLSRFMGDENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILTELQTIRSRTHKEIGEMYSFDQLRDMHYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKNYGEFSPERWLQNGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKTPKHLLSLTLRMENGLQVMVKKRDRSMPI 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 29937769 29939706 + CaPI482276_10g016140.1 Cam10g1614 138277
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1614 514 FunFam Cytochrome P450 33 511 - -
Cam10g1614 514 PANTHER CYTOCHROME P450 24 501 - -
Cam10g1614 514 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 Pfam Cytochrome P450 81 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 CDD CYP86A 76 501 - -
Cam10g1614 514 SUPERFAMILY Cytochrome P450 38 508 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam10g1614 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1926 Cam-Chr6:30215043 Cam10g1614 Cam-Chr10:29937769 1.60E-111 dispersed
Cam07g0071 Cam-Chr7:1885723 Cam10g1614 Cam-Chr10:29937769 1.90E-120 dispersed
Cam09g0446 Cam-Chr9:4714560 Cam10g1614 Cam-Chr10:29937769 2.30E-103 dispersed
Cam10g1476 Cam-Chr10:28467277 Cam10g1614 Cam-Chr10:29937769 1.70E-103 dispersed
Cam10g1614 Cam-Chr10:29937769 Cam10g1877 Cam-Chr10:32790805 8.90E-110 dispersed
Cam10g1613 Cam-Chr10:29930185 Cam10g1614 Cam-Chr10:29937769 1.90E-221 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1614 - - - 0.0