Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1702 TTCTTGCAGAATAACAAATTCACTGGATCAGTTGCCTACTTGTCTCGCCTTCCATTAATTGACTTAAACATCCAAGACAATTATTTTAGTGGCATTATTCCAAAAAATTTTAGAAATATTCCAAATTTGTGGATTGGGGGCAATAGGTTTCGCCCAGAAGTCAATTCTCCACCCTGGGACTTTCCCCTGGAAAAAGCACCTATCGTGCAGAACATCAGTGGCCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGGGGTGTAGTCAGGCACGAGAAGAAAAGGCTTGGTCCGGGTGGAATTGTTCTCCTGGTTGGAGGGTTAACACTAGTAGTTAGCTTTGCAGCTATCTTTTTCGTATTTTCCATGAAGAAAGTGCATGACAAGAAAATAAATTTGAAGATTGGCAATATGTTACCTCGTTCTCTTCCTCTGAGCAAAGCTGAAGATGGTTCGTCTACTGCAACAGAGGAGAGCTCACAAAGCTTTCCCCTGAGTTCACTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACTGAGAAAGTTTCTGGAAGAAAAGGTTTTTCGAAGAGATGCAGGCTCCCAGTGAGAACAAAAATTTACACTCTGACAGAGCTTCAATCCACTACAAACAAGTTTAGTCAAGAGAATCTTTTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCGGTGAAAAATATCAACATGGGAGAGCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCAAACATTGTTACACTGCTTGGATATTGTGTAGAGCATGGACAACATATACTCGGATATGAATTTGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCCAGGGCTTTAGATTATCTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTGGATGAAGAACTGACGCCTCGTATTTGTGATTGTGGGCTGTCGGTTTTGAGGCCACTTGTGACCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGTGATAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGGAGAAAACCATTTGACAATTCGAAACCGAGGAAGGAGCAATTGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATCAAAGGAACATTTTCCTCCAAGGCTCTCTCACGCTTTGTCGATATTATCTCCCTTTGTATACAGTCTGTGAAAGAATTTCGACCGCCAATGTCTGAAATAGTGGAACATCTAACAAATCTTCAAAGAAAGATGGAAATGGTGAAACGTGCTACAGCGGATGGAACTGAAGTGGATCCTTTTGAGAAATCCTTTCGTTCTACCAATACTGGCTTCCTCCGTGCGTTACTGTATTCCAGTGTCCTTGTCTTCTTGGTAATTCTGACTTCAGTCGTTCAGTGCTTTACTGACCCGTTCGATGTTATAGCTCTTCTCAATCTGTATAGTACCCTAAATTACCCACCTGAGCTTAAAGGATGGAGAACAGATGGTGGGGATCCTTGCGATGGAACGTGGACTGGGGTATTTTGTGTTGGTTCTTCTGTAATAAACCTTAAACTTAATAGACTAAACCTTTCTGGGAATCTTGGAGACCAGCTTTATCTTCTCCATAATTTGAAGCAACTGGATGCTAGTTCCAATTCAATTCTGGGTGAATTTCCTTCTGGCTTACCCCCAAATGTCACTTCTGTGAATCTAAGCCATAATGTCCTATCTGGCCCCATCGGGAATGCTTTTTCTGGCTTACAAAATCTTATGGAGATGGATCTGTCATATAACGATTTCACTGGAGATTTACCAAGTTCATTTGCTTCCTTGACTAATATCAATAGACTGTTCTTGCAGAAAAACAAATTCACAGGATCGGTTTCCTACTTATCTGACCTTCCATTGACTGATTTGAACATCCAAGACAATTACTTTAGTGGCACTATTCCAGAGCATTTCAAGACAATTCCAAATTTATGGATTGGGGGAAATAGGTTCGATGTAAGTAATTCTCCACCCTGGGATTTTTCTGTGGAAACAACACCTTTGACGCGAAACAATAGTAGCTTTCCATTAACAGAACCGATTATCATTGAGAAATGTCCCTACAAGAAAAAGGGGGGGAAAGGAGGGGAAAGATTGGGCCCTGCTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTAATAATCTTTGCAGCTCTCTTTATTGCAATCTGCAACACACAAATATGTGCAAAGCAAAGGAGCATGAAGCACGTCAACGTGTCTCTTCCAGTCAGCAAAGCTGAAGACGGTTATTCCACCGCACCAGTTGGCAGCCCCCAGATCTTGCCTCTCAGTTCTCCAGACATAGGTGGCGGTCTGAATCATGCATGTCCTACTCGTCATGCTAGAACTGAGAGGGGATGTAGCAGAAGTTTCTCTAAGAGATCCTGGTTCCCAGAAAAAACAAAAACTTACACTGTCACAGAGCTCGAATCCGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCTGATGGCCAAATTTTGGCTGTGAAGAGGGTTGATATGGCGGCACTCTCTTTCACACAAGAACAACAGTTTCTGGATGTGGTCTGCACTGTTTCCCGTTTGAGGCACCCTAACATTGTTAGCCTTCTTGGATACAGTGTAGAGAATGGACAACATTTACTAGCCTATGAGTACGTCAGGAATCTGTCTCTTGACGATGCTCTACACAGTGTAGCACACAACCCTCTATCGTCGAGTGTTCGAATCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCCTTTTTCCCCCCATTTGCTCACTGCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTCATGCCAAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGTTAGCAATAGAGTTAAAATCAAGGCTGCTCAAATTGCTTTTGCTGACACTGGCTACTTTGCACCTGAATATGGCCAATCTGGGATTGATCATACCAAAAGTGATGTGTATGCATTCGGAGTGTTGTTTCTGGAGCTTATTACCGCAAAGAAACCAAACGATTTGAGACCAGGGATCGAGCAATCTCTGTCAAGATGGGCATCATTTCAGCTTCTCGACTGTGGGAGTCTAGATGAGATTATTGATCCTGAGATTAAAGGAACATTATCCTCCAAGGTTCTCTCTCGCTGTGCTGATATTATCACCCTTTGCATACAGCCTGTAATGGAACGTCGGCCACCCATGTTTGCCATTGTTGGATACCTGGCAAGTATTCAAAGAAGGTTCGAGATGGAAAAACGTGCTGCAGCGGAAGGTAAAGTAGTTGACACTTTCGAGAAATCCTTCCACACAACTAACACAGGGATTGTAAGACATCCTAACAAGACTGTCATTGGCATCAATGCTATCAATCGTCGCTTCTGGGTTCGTGCTATGATGGAGGACGCATCAAAGAACGGCGTCCTGGCCGTCCAAACGCTAAGGAACAACATAATGGCGTCTACTCTTCTGGCATCGACGGCGATAATGCTCTGTTCTCTAATCGCCGTCTTAATGACAAGCGGCGGCCACAGCGAATCTCCATTAGTCGTACTCGGCGACAGAAGCCAGTTCAGTTTCTCCATCAAATTTTTCGCCATTTTGCTTTGCTTTCTCGTAGCATTTTTGTTCAATGTTCAATCCATTAGGTATTATAGCCATGCCAGCATTCTGATCAACACGCCTTTCAAGAAAATTGCAATCGACGATCATAACCAACGGCTCACGGCGGAATACGTGGCGGCGACGGTGAACAGAGGCAGCTATTTCTGGTCGTTGGGATTGCGAGCTTTCTACTTCTCGTTTCCTCTGTTTTTGTGGATTTTCGGACCTATTCCTATGTTTTCTTCTTCATTTCTGCTTGTTTTTATGCTTTATTTCCTTGATGCTACTTTTGAATTCTGCTGGACGGATGGGAATTTGGATTACCTTCCTCAAAGAGACGAAGAAGAGGAAATTGGGAAATAG 4311 43.49 FLQNNKFTGSVAYLSRLPLIDLNIQDNYFSGIIPKNFRNIPNLWIGGNRFRPEVNSPPWDFPLEKAPIVQNISGPPTTKSNAIQNYPSRGVVRHEKKRLGPGGIVLLVGGLTLVVSFAAIFFVFSMKKVHDKKINLKIGNMLPRSLPLSKAEDGSSTATEESSQSFPLSSLLMGGPRPIPLLNHTRTEKVSGRKGFSKRCRLPVRTKIYTLTELQSTTNKFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGELSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHILGYEFVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANILLDEELTPRICDCGLSVLRPLVTNRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQLLVKWASSRLHDNESLEQMVDPGIKGTFSSKALSRFVDIISLCIQSVKEFRPPMSEIVEHLTNLQRKMEMVKRATADGTEVDPFEKSFRSTNTGFLRALLYSSVLVFLVILTSVVQCFTDPFDVIALLNLYSTLNYPPELKGWRTDGGDPCDGTWTGVFCVGSSVINLKLNRLNLSGNLGDQLYLLHNLKQLDASSNSILGEFPSGLPPNVTSVNLSHNVLSGPIGNAFSGLQNLMEMDLSYNDFTGDLPSSFASLTNINRLFLQKNKFTGSVSYLSDLPLTDLNIQDNYFSGTIPEHFKTIPNLWIGGNRFDVSNSPPWDFSVETTPLTRNNSSFPLTEPIIIEKCPYKKKGGKGGERLGPAGIAIVAGGGGFVIIFAALFIAICNTQICAKQRSMKHVNVSLPVSKAEDGYSTAPVGSPQILPLSSPDIGGGLNHACPTRHARTERGCSRSFSKRSWFPEKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKRVDMAALSFTQEQQFLDVVCTVSRLRHPNIVSLLGYSVENGQHLLAYEYVRNLSLDDALHSVAHNPLSSSVRIQIAHGVAKALDYLHNAFFPPFAHCNLKAANIMLDEEFMPKICDCGLSVLKPLVSNRVKIKAAQIAFADTGYFAPEYGQSGIDHTKSDVYAFGVLFLELITAKKPNDLRPGIEQSLSRWASFQLLDCGSLDEIIDPEIKGTLSSKVLSRCADIITLCIQPVMERRPPMFAIVGYLASIQRRFEMEKRAAAEGKVVDTFEKSFHTTNTGIVRHPNKTVIGINAINRRFWVRAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGHSESPLVVLGDRSQFSFSIKFFAILLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDDHNQRLTAEYVAATVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFEFCWTDGNLDYLPQRDEEEEIGK 1436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31046819 31059895 - CaPI482276_10g017020.1 Cam10g1702 138365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1702 1436 MobiDBLite consensus disorder prediction 147 169 - -
Cam10g1702 1436 SUPERFAMILY L domain-like 553 742 - -
Cam10g1702 1436 ProSiteProfiles Protein kinase domain profile. 915 1197 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1702 1436 ProSiteProfiles Protein kinase domain profile. 221 499 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1702 1436 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 552 1194 IPR046959 -
Cam10g1702 1436 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 880 992 - -
Cam10g1702 1436 Gene3D Transferase(Phosphotransferase) domain 1 993 1216 - -
Cam10g1702 1436 Gene3D Transferase(Phosphotransferase) domain 1 299 521 - -
Cam10g1702 1436 SUPERFAMILY Protein kinase-like (PK-like) 198 498 IPR011009 -
Cam10g1702 1436 Gene3D Ribonuclease Inhibitor 556 780 IPR032675 -
Cam10g1702 1436 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 993 1204 - -
Cam10g1702 1436 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 647 758 - -
Cam10g1702 1436 FunFam Leucine-rich repeat receptor-like protein kinase 299 508 - -
Cam10g1702 1436 Pfam Leucine rich repeat 645 705 IPR001611 GO:0005515(InterPro)
Cam10g1702 1436 Pfam Leucine rich repeat N-terminal domain 559 596 IPR013210 -
Cam10g1702 1436 Pfam Protein of unknown function, DUF599 1223 1413 IPR006747 -
Cam10g1702 1436 Gene3D Phosphorylase Kinase; domain 1 184 298 - -
Cam10g1702 1436 Gene3D Phosphorylase Kinase; domain 1 877 992 - -
Cam10g1702 1436 MobiDBLite consensus disorder prediction 150 169 - -
Cam10g1702 1436 Pfam Protein kinase domain 222 496 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1702 1436 Pfam Protein kinase domain 915 1184 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g1702 1436 SUPERFAMILY Protein kinase-like (PK-like) 892 1190 IPR011009 -
Cam10g1702 1436 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 186 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1111 Cam-Chr4:25243213 Cam10g1702 Cam-Chr10:31046819 5.80E-45 dispersed
Cam06g1594 Cam-Chr6:27414466 Cam10g1702 Cam-Chr10:31046819 5.20E-35 dispersed
Cam07g1140 Cam-Chr7:25833262 Cam10g1702 Cam-Chr10:31046819 3.20E-84 dispersed
Cam10g1702 Cam-Chr10:31046819 Cam08g0876 Cam-Chr8:12847818 8.40E-57 dispersed
Cam10g1702 Cam-Chr10:31046819 Cam09g0143 Cam-Chr9:2246534 9.90E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85510 PF00069 Pkinase 4.90E-34 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1702 - - - 0.0