Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1715 ATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCACATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTAATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCGAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGGGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTACACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTGATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA 1317 43.36 MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVNVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSRDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDNFDTRLIKGAEGQMVRLIAIPRFCEKGVAVVETDYLKLPASKKVKQCGL 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31191383 31197496 + CaPI482276_10g017150.1 Cam10g1715 138378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1715 438 Pfam DNA polymerase alpha/epsilon subunit B 182 392 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Cam10g1715 438 FunFam DNA polymerase delta small subunit 169 430 - -
Cam10g1715 438 CDD MPP_PolD2_C 181 420 IPR041863 -
Cam10g1715 438 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Cam10g1715 438 Gene3D - 40 164 - -
Cam10g1715 438 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 7 420 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Cam10g1715 438 Gene3D - 169 428 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1715 K02328 - csv:101221438 816.609