Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam10g1877 | ATGGAAATTTTCTTTCTTCTTCACCCAATTGTTTTCCTTTTATTTTTCCTTCTATTTCTCTCTATAATCATCTTCCTACTGAAGCCTAAATTTCTGTGCCACTGTGAAATTTGCCAAGCTTATTTGTCCTCATCTTGGTCCAAAGATTTCTTTAACCTCTGTGATTGGTATTCCCATCTTCTCCGGCAGTCTCCGACGAAGACCATTCACATCCACGTTCTGAAGAACACGATTACGGCGAATCCCGACAACGTGGAATACATTCTCAAGACGAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGGGATTTGTGGAGGTTTCAGAAGAAAATGGCGATCCTCGAACTTGGTCAACAGTCGATTAGATCTTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGGCTTTTGCCGCTTCTTTCGTCGGTTGCCGACGGCGGAGTTTTGGATTTGCAGGATGTGTTTAGGAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCTCTTCCGATGTCCGAATTTGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAGTGAGAGAGAATTGAAAAAAGCAATAAAACTAATAAACATGTTGGCTCATGAAGTAATTCGACAGAGAAGAAAAATGGGATTGTCAACCCATAGGGACCTCCTTTCTCAATTCATGCGAACCGTGTCTGACGAAACTTTCTTACGAGACATTGTTGTGAGCTTTCTTTTAGCCGGTCGCGATACTATTGCCTCAGCCCTTACTAGCTTCTTCTGGGTTCTTTCCAATCATCCTACCGTAGAGTCTGCTATCCAACTTGAGGCAGACCGAATCATGGGTCCCAACTCAAACCCTACATCCTTCGACCAAATACGAAACCTCCACTACTTACAAGCCGCTATTTTTGAGTCCATGAGGCTGTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAGAATGACGATGTTTTACCCGATGGAACTTTTGTTGGACGTGGTACTCGAGTTACTTACCATCCCTATGCTATGGGTCGAGTTGAGCAAAATTGGGGTCCAAATTGCCTCGATTTCAAACCCGAACGGTGGCTGAAAAACGACATATTCTGCCCCGAGAACCCTTTCAAGTACCCAATTTTTCAAGGTGGTTTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTTGCTGAATTGAAAATTGTAGCACTTTCCCTTATTCGTCATTTTCAAATCCAGTCCACGACACCAGGTGTCACACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGCGGTGGATTCCAAGTTTCCATTAGTAAGAAGAAGAAGAAATGGAATTGA | 1476 | 43.36 | MEIFFLLHPIVFLLFFLLFLSIIIFLLKPKFLCHCEICQAYLSSSWSKDFFNLCDWYSHLLRQSPTKTIHIHVLKNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKKMAILELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSEFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGSERELKKAIKLINMLAHEVIRQRRKMGLSTHRDLLSQFMRTVSDETFLRDIVVSFLLAGRDTIASALTSFFWVLSNHPTVESAIQLEADRIMGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVGRGTRVTYHPYAMGRVEQNWGPNCLDFKPERWLKNDIFCPENPFKYPIFQGGFRFCLGKEMALAELKIVALSLIRHFQIQSTTPGVTPRFSPGLTATFCGGFQVSISKKKKKWN | 491 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 32790805 | 32793337 | + | CaPI482276_10g018770.1 | Cam10g1877 | 138540 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam10g1877 | 491 | Gene3D | Cytochrome P450 | 46 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PANTHER | CYTOCHROME P450 | 32 | 467 | - | - | |
| Cam10g1877 | 491 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PRINTS | P450 superfamily signature | 433 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | CDD | CYP86A | 65 | 468 | - | - | |
| Cam10g1877 | 491 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | Pfam | Cytochrome P450 | 75 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam10g1877 | 491 | SUPERFAMILY | Cytochrome P450 | 52 | 485 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g1291 | Cam-Chr1:23968927 | Cam10g1877 | Cam-Chr10:32790805 | 1.60E-177 | dispersed | |
| Cam10g1613 | Cam-Chr10:29930185 | Cam10g1877 | Cam-Chr10:32790805 | 8.00E-103 | dispersed | |
| Cam10g1614 | Cam-Chr10:29937769 | Cam10g1877 | Cam-Chr10:32790805 | 8.90E-110 | dispersed | |
| Cam10g1877 | Cam-Chr10:32790805 | Cam11g0930 | Cam-Chr11:14600981 | 5.20E-75 | dispersed | |
| Cam10g1877 | Cam-Chr10:32790805 | Cam06g1926 | Cam-Chr6:30215043 | 1.10E-112 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam10g1877 | K20624 | - | csv:101207686 | 875.544 |