Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1878 ATGGAAGAGCTTCAACCTCAACTTCAACCACTACCACAACCATCCATTGGAACTACCTGCAAGAAAGGGAAGAAGAAACCACCGGCTCGGGAGAAGAAGGACCCGGAGAAAAGAGCTAAGAAGAAGAAACCAGGGGCTACTCCTTCAGTCCACGAACATCAACCTACTGGTCGTTTAGATAATGGCCCCAAGGTTAAGGTTTCAGAGTTTGATCGTTGTGTTGAAAACCATTTTAGAGCCATGGATACAATTGTCGAGCTCTGTTGTGAGGCAGAGGATGGCGATGGCGGCATTGACGAATCTGACATTCAGCGCTTTTCATCATCCACAATTTTCTTGAGGGAATGGAGGTTCTACAATTATGAACCGAAAACTATCAAGTTTGCTGGCGATTTAAGAGGCCTCGAGGTTAAGGATGCTGAGATCACGATAAACTTACCACAGTTCTCTTCTGCAGCTGTTCTAAAGAATGGAGCACCGCCTGGAGCCACTACATCTCTGGACTTCCGAAACTTTGCTATGCATGTTGGTGGGCCTGTTTGGGCCTTAGATTGGTGTCCTCAAGTTCATGAAAGGACCGACTCCCTTATCAAATGTGAGTTTATTGCTGTTTCTGCTCATCCCCCTGGTTCTTCTTATCACAAGATGGGTATCCCGCTCACTGGAAGAGGTATGGTGCAAATATGGTGTTTAGTGCATGGCACTGAAAGCTATGAACCGACCAATGTAGGAGAGCCACCTTCAGACTTATCATCTCAACCAAAAAGGCCTAGAGGAAGACCACCTGGGCGCAAGAAAAATGGGGTGTCGGCTTTGCCATCTCAACCAAAGAGGCCTAGAGGAAGACCTAAACAGAAACAAGAAGAATCCAGTGATAAGAAGGGTGACAGTTACCAACTTGTTCAGGCCTTGTCTATTGAAAACCCAGTTGGTTCATCCAACTTGCTTGAGATTGATGGTGCCCCCAAAAATTCTGAAAATTTTGCATTACTGGAAAACAGTGTTGAAAGAGAGAGGAGTACCTTACAAGAAGTTTCTACATGCAATTCTGAAGATGAAGTTCCTGCTCAGAAGAGAAGAGTGAGAAGAAAAGTTGAGCCTAGGAATCAAGTTGATGACGTGGGAGTGTTATCACTTACAGAGAATCGAGAAGATGGATCCAATGCTATCAATCTTGAGGCAAATGAGAATGTTATTAGTGAAAATTCTGGGGAAGAAAATCTAATATGTAAGAACATTTCAGAGAATGCTGTCTTAGACACTAGTTCAATTGAATTTTCTATTCCCGAGAGCATTGCTTTGCCAAGAGTCGTACTGTGTTTAGCTCACAATGGAAAGGTAGCATGGGATTTGAAATGGAAACCAACTAATGCGTGTACTGACAATTGCAAGCACCGAATGGGCTACCTTGCTGTCTTGCTGGGCAATGGATCTCTAGAAGTCTGGGAGGTTCCTTTTCCTCATGCAGTGAAGGCCATCTATTCTAAATTCAATGGGGAGGGTACAGACCCTCGCTTTGTGAAGTTGAAGCCTGTTTTCAGATGCTCGATGTTGAGAACTGCGAATACACAGAGCATCCCTCTGACAGTGGAATGGTCGCTAACACCTCCTTATGATTATCTGCTCGTTGGATGTCATGATGGAACGGTCGCATTGTGGAAGTTTTCTGCAAATAGTACCTGTGAAGATACGAGGCCTTTACTTCGTTTTAGTGCAGATACAGTTCCAATAAGAGCGGTTGCATGGGCACCAAGTGAAAGCGGTCCTGAAAGTGCAAATGTGATACTTACTGCTGGCCATGGAGGTTTAAAATTTTGGGACCTAAGAGATCCTTTCCGTCCCTTGTGGGACCTTCATCCAGCACCGAGGATCATATATAGTCTGGATTGGCTTCCTAATCCTAGATGCGTTTTTTTATCCTTTGATGATGGAACATTGAGACTTCTCAGTTTGTTAAAGGCTGCATATGATGTTCCAGTAACTGGTCAACCCTTTACAGCGATAAAACAAAAAGGGCTACACACTTACTTTTGTTCATCATATGCCATTTGGAGTATTCAAGTGTCAAGGCAGACAGGCATGGTTGCGTACTGCGGTGCTGATGGAGCTGTTGTCCGTTTCCAGCTTACTACAAAAGCAGCAGACAAAGAGAATTCACGCCATCGCACCCCACATTATGTATGCGAATACTTAACCGAGGAGGGATCAATTATTACACTCCACTCTCCAGCATCAAATATTCCATTCTCTTTGAAGAAGCTGCCCAACAAATCTGAACACCCATTGTCCATGCGAGCTATTTTATCTGATTCAATGCAGTCAAATGATGGAAATCATAAAACTGCCGCAGCTCCAGCATTGGAAACTGTATCAGCCCTTTGCTCGGATGTTGATGTCGGTGTTGAATCTGGATGCGAGGAAACACTGATGTCCATCAAGAAGAAAAACCAAACTCAATCAAAGTGCAAGAAGGGAGTTGAGAACGAAGAATTGGAATGTAGCGATGAGCCTAATGATGATGCACAGATGGATGCTAATGTAGTGCCTGGTTCTGGGGATGTCTTTGAAAGTCTCCCTCCCAAATCAGTTGCAATGCATAGAGTGAGATGGAACATGAACATAGGGAGTGAAAGATGGTTGTGCTACGGTGGAGCAGCTGGAATTCTACGTTGTCAGGAGATTGTGCTGTCTGCTCTTGATATGAATTATGAGACCAGAGAAGCCATTTCAAATTGCAATAATTGTTATCACCATCGAGCCATGGTGCCTTCATTCTTGTGGGCTAAGGCGTATGTCGTGTACATGGGAGCATTACCAAAATTGGAGAGCCATGAAGTTCTAGCAGATCATCATCATAACCTCCTTGCTAATGCTGTTGGAGATGAGGAATTGGCAAGAAAAGCCAAGATTTATAGCTATGGAAGAAGCTTCAATGGATTTGCTGCAAGGCTCTTGCCCCATGAAGCCAACAAACTAGCAAAGGAAAACAGTGTGGTGTCGGTATTTCGGAGCAAGACGAGGAAACTGCATACAACAAGATCATGGGACTTTTTGGGGCTGTCGGAGGCGGCGAGCCGGCAGAACGCCGCCGCAGAATCCGACATAATAGTGGGATTGTTGGATTCGGGGATATGGATGGAGGGTCCAAGTTTTAAAGATGATGGCTATGGCGAAATTCCGTCTAAGTGGAAAGGCAAGTGTGTCACTGGCCATAACTTCACTGCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCAACCTTGAAAAAATAGACGACACCATCAACCAAAGCCCCGCCGACGAGATCGGTCACGGCTCCCACACCGCCTCCACAGTCGCCGGATCCGCCGTGTACGGCGCCAGTCTCTACGGCATCGCCGGAGGCACAGCGCGCGGCGGCGTCCCGGCGGCGAGAATCGCGATGTACAAAGTGTGCTGGATCTTAGGGTGCAGCGACATGGACCTGCTGGCCGGATTCGACGACGCGATCGCGGACGGAGTTGACATCATATCGGTGTCGATCGGCGGCGACTCGACGGAATTCTTCGAGGATCCGATCGCGATCGGGTCGTTTCACGCAATGGAGAAAGGGATATTGACGAGTTGCTCGGCCGGAAATAGCGGGCCGGATTTAAAGACGGTGGAGAACACGGCGCCGTGGATAATGACGGTGGCGGCTTCTACGATTGATAGGGATTTCAGTACCATCGTCAAGTTGGGTAACGATAAGAAGTTATCTGGAGTATCAGTGAACACATTTTCTCCAAAGAAGCAAATGTACCCTTTAATCTCCGGATCAAATGCAGCATTACCTAATCATACCTCTGTTGATCCAAGGTGGTGTGATTATGGGAGTCTTGATGAGAAAAAAGTGAAAGGAAAAATAGTGTATTGTTTGGGATCAGTATACCAAGAATACACCATTTCTGAGCTTGGGGGCACAGGTGTAATTTCAAATCTTATGGGCACTACTGAAATTGCTATTACCACTCCTATTCCTTCCACTCATCTTTCCTCTCTCAACTCTGACTATGTTATTGCCTACATTAACTCCACCAAAAACCCTCAAGCTGTCATTTACAAAACTACCGCAAGGAAGGTTGATGCTCCCTTTTTGGCTTACTTTTCTTCTAGAGGTCCTCAAACAATAGCTCCCCCTATTCTTAAGCCGGACATTGCAGCACCTGGGATGAACATTTTAGCAGCGTTCTCAAAATTGGCTTCAATTCCGAGCGGCAGACATTCCCTTTTCAACCTTCTTTCTGGCACTTCTATGGCTTGTCCCCACGCCGCCGCCGCCGCCGCCTATCTCAAAACCTTCCACCCCACTTGGTCCCCCGCCGCCATCAAGTCCGCCCTTATCACCACCGCAACGCCATTAAAGATCGGAGATAATTTGGACGCGATCGGCGGCGGCGCCGGCCAAATTAATCCGACCAAAGCGGTGCATCCAGGCCTCATTTACGACCTCTCTCGCACCTCTTACCTCTCTTTTCTTTGCTCCAACAAACGCTACTCCGGCACCGCCCTTGCCATCCTCACCGGAAACACCTCTTTTAACTGCTCTGCCGTCCCGCTAGCCACCGGCTACGACGCCCTCAACTACCCTTCCATGTACGTGCCCCTCGACTACGACTCCACCTCTGTTTCCGCCGTCTTCCACCGAACAGTCACCCACGTCGGATTCGGCCCATCAACGTACAAGGCAAAGGTCAAATCGCCGGCGGGTTTGTCGGTGAGAGTGTTGCCGGAGACTCTGAAATTCGATCGGGCGTACGAAAAACAATCGTTTAAGGTGGTGGTGGAAGGGGCAGCGCCCGCTGTGGGGGAGGCTCCGTTGACAGCTTCACTTGAATGGGATGATTCTAAGCATAACGTTAGGAGCCCAATTTTGGTGTTTAAGGTTTAA 4911 47.26 MEELQPQLQPLPQPSIGTTCKKGKKKPPAREKKDPEKRAKKKKPGATPSVHEHQPTGRLDNGPKVKVSEFDRCVENHFRAMDTIVELCCEAEDGDGGIDESDIQRFSSSTIFLREWRFYNYEPKTIKFAGDLRGLEVKDAEITINLPQFSSAAVLKNGAPPGATTSLDFRNFAMHVGGPVWALDWCPQVHERTDSLIKCEFIAVSAHPPGSSYHKMGIPLTGRGMVQIWCLVHGTESYEPTNVGEPPSDLSSQPKRPRGRPPGRKKNGVSALPSQPKRPRGRPKQKQEESSDKKGDSYQLVQALSIENPVGSSNLLEIDGAPKNSENFALLENSVERERSTLQEVSTCNSEDEVPAQKRRVRRKVEPRNQVDDVGVLSLTENREDGSNAINLEANENVISENSGEENLICKNISENAVLDTSSIEFSIPESIALPRVVLCLAHNGKVAWDLKWKPTNACTDNCKHRMGYLAVLLGNGSLEVWEVPFPHAVKAIYSKFNGEGTDPRFVKLKPVFRCSMLRTANTQSIPLTVEWSLTPPYDYLLVGCHDGTVALWKFSANSTCEDTRPLLRFSADTVPIRAVAWAPSESGPESANVILTAGHGGLKFWDLRDPFRPLWDLHPAPRIIYSLDWLPNPRCVFLSFDDGTLRLLSLLKAAYDVPVTGQPFTAIKQKGLHTYFCSSYAIWSIQVSRQTGMVAYCGADGAVVRFQLTTKAADKENSRHRTPHYVCEYLTEEGSIITLHSPASNIPFSLKKLPNKSEHPLSMRAILSDSMQSNDGNHKTAAAPALETVSALCSDVDVGVESGCEETLMSIKKKNQTQSKCKKGVENEELECSDEPNDDAQMDANVVPGSGDVFESLPPKSVAMHRVRWNMNIGSERWLCYGGAAGILRCQEIVLSALDMNYETREAISNCNNCYHHRAMVPSFLWAKAYVVYMGALPKLESHEVLADHHHNLLANAVGDEELARKAKIYSYGRSFNGFAARLLPHEANKLAKENSVVSVFRSKTRKLHTTRSWDFLGLSEAASRQNAAAESDIIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGHNFTACNRKVIGARFFNLEKIDDTINQSPADEIGHGSHTASTVAGSAVYGASLYGIAGGTARGGVPAARIAMYKVCWILGCSDMDLLAGFDDAIADGVDIISVSIGGDSTEFFEDPIAIGSFHAMEKGILTSCSAGNSGPDLKTVENTAPWIMTVAASTIDRDFSTIVKLGNDKKLSGVSVNTFSPKKQMYPLISGSNAALPNHTSVDPRWCDYGSLDEKKVKGKIVYCLGSVYQEYTISELGGTGVISNLMGTTEIAITTPIPSTHLSSLNSDYVIAYINSTKNPQAVIYKTTARKVDAPFLAYFSSRGPQTIAPPILKPDIAAPGMNILAAFSKLASIPSGRHSLFNLLSGTSMACPHAAAAAAYLKTFHPTWSPAAIKSALITTATPLKIGDNLDAIGGGAGQINPTKAVHPGLIYDLSRTSYLSFLCSNKRYSGTALAILTGNTSFNCSAVPLATGYDALNYPSMYVPLDYDSTSVSAVFHRTVTHVGFGPSTYKAKVKSPAGLSVRVLPETLKFDRAYEKQSFKVVVEGAAPAVGEAPLTASLEWDDSKHNVRSPILVFKV 1636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32797300 32811003 + CaPI482276_10g018780.1 Cam10g1878 138541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1878 1636 Pfam Fibronectin type-III domain 1534 1633 IPR041469 -
Cam10g1878 1636 CDD Peptidases_S8_3 1008 1459 IPR034197 -
Cam10g1878 1636 Pfam Subtilase family 1033 1465 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam10g1878 1636 Gene3D Peptidase S8/S53 domain 1034 1496 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g1878 1636 MobiDBLite consensus disorder prediction 1 16 - -
Cam10g1878 1636 ProSitePatterns Serine proteases, subtilase family, serine active site. 1423 1433 IPR023828 -
Cam10g1878 1636 Pfam Peptidase inhibitor I9 931 1010 IPR010259 -
Cam10g1878 1636 PRINTS Subtilisin serine protease family (S8) signature 1101 1114 IPR015500 -
Cam10g1878 1636 PRINTS Subtilisin serine protease family (S8) signature 1032 1051 IPR015500 -
Cam10g1878 1636 PRINTS Subtilisin serine protease family (S8) signature 1422 1438 IPR015500 -
Cam10g1878 1636 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 931 1631 IPR045051 -
Cam10g1878 1636 MobiDBLite consensus disorder prediction 281 295 - -
Cam10g1878 1636 SMART WD40_4 669 708 IPR001680 GO:0005515(InterPro)
Cam10g1878 1636 SMART WD40_4 514 554 IPR001680 GO:0005515(InterPro)
Cam10g1878 1636 SMART WD40_4 563 607 IPR001680 GO:0005515(InterPro)
Cam10g1878 1636 SMART WD40_4 434 483 IPR001680 GO:0005515(InterPro)
Cam10g1878 1636 SMART WD40_4 611 650 IPR001680 GO:0005515(InterPro)
Cam10g1878 1636 ProSiteProfiles Serine proteases, subtilase domain profile. 1014 1483 - -
Cam10g1878 1636 Gene3D - 1231 1366 - -
Cam10g1878 1636 CDD PA_subtilisin_like 1238 1360 - -
Cam10g1878 1636 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 926 1010 IPR037045 -
Cam10g1878 1636 MobiDBLite consensus disorder prediction 240 297 - -
Cam10g1878 1636 MobiDBLite consensus disorder prediction 29 48 - -
Cam10g1878 1636 MobiDBLite consensus disorder prediction 1 64 - -
Cam10g1878 1636 SUPERFAMILY WD40 repeat-like 468 726 IPR036322 GO:0005515(InterPro)
Cam10g1878 1636 SUPERFAMILY Subtilisin-like 1009 1487 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam10g1878 1636 Gene3D - 361 745 IPR015943 GO:0005515(InterPro)
Cam10g1878 1636 Gene3D - 1500 1635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0649 Cam-Chr7:12449397 Cam10g1878 Cam-Chr10:32797300 5.30E-172 dispersed
Cam07g0652 Cam-Chr7:12592077 Cam10g1878 Cam-Chr10:32797300 3.60E-168 dispersed
Cam10g0387 Cam-Chr10:6187817 Cam10g1878 Cam-Chr10:32797300 1.60E-30 dispersed
Cam10g0388 Cam-Chr10:6196927 Cam10g1878 Cam-Chr10:32797300 2.20E-141 dispersed
Cam10g1878 Cam-Chr10:32797300 Cam11g1205 Cam-Chr11:24014317 3.20E-60 dispersed
Cam10g1878 Cam-Chr10:32797300 Cam04g1016 Cam-Chr4:24328320 6.10E-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1878 - - - 0.0