Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g1878 | ATGGAAGAGCTTCAACCTCAACTTCAACCACTACCACAACCATCCATTGGAACTACCTGCAAGAAAGGGAAGAAGAAACCACCGGCTCGGGAGAAGAAGGACCCGGAGAAAAGAGCTAAGAAGAAGAAACCAGGGGCTACTCCTTCAGTCCACGAACATCAACCTACTGGTCGTTTAGATAATGGCCCCAAGGTTAAGGTTTCAGAGTTTGATCGTTGTGTTGAAAACCATTTTAGAGCCATGGATACAATTGTCGAGCTCTGTTGTGAGGCAGAGGATGGCGATGGCGGCATTGACGAATCTGACATTCAGCGCTTTTCATCATCCACAATTTTCTTGAGGGAATGGAGGTTCTACAATTATGAACCGAAAACTATCAAGTTTGCTGGCGATTTAAGAGGCCTCGAGGTTAAGGATGCTGAGATCACGATAAACTTACCACAGTTCTCTTCTGCAGCTGTTCTAAAGAATGGAGCACCGCCTGGAGCCACTACATCTCTGGACTTCCGAAACTTTGCTATGCATGTTGGTGGGCCTGTTTGGGCCTTAGATTGGTGTCCTCAAGTTCATGAAAGGACCGACTCCCTTATCAAATGTGAGTTTATTGCTGTTTCTGCTCATCCCCCTGGTTCTTCTTATCACAAGATGGGTATCCCGCTCACTGGAAGAGGTATGGTGCAAATATGGTGTTTAGTGCATGGCACTGAAAGCTATGAACCGACCAATGTAGGAGAGCCACCTTCAGACTTATCATCTCAACCAAAAAGGCCTAGAGGAAGACCACCTGGGCGCAAGAAAAATGGGGTGTCGGCTTTGCCATCTCAACCAAAGAGGCCTAGAGGAAGACCTAAACAGAAACAAGAAGAATCCAGTGATAAGAAGGGTGACAGTTACCAACTTGTTCAGGCCTTGTCTATTGAAAACCCAGTTGGTTCATCCAACTTGCTTGAGATTGATGGTGCCCCCAAAAATTCTGAAAATTTTGCATTACTGGAAAACAGTGTTGAAAGAGAGAGGAGTACCTTACAAGAAGTTTCTACATGCAATTCTGAAGATGAAGTTCCTGCTCAGAAGAGAAGAGTGAGAAGAAAAGTTGAGCCTAGGAATCAAGTTGATGACGTGGGAGTGTTATCACTTACAGAGAATCGAGAAGATGGATCCAATGCTATCAATCTTGAGGCAAATGAGAATGTTATTAGTGAAAATTCTGGGGAAGAAAATCTAATATGTAAGAACATTTCAGAGAATGCTGTCTTAGACACTAGTTCAATTGAATTTTCTATTCCCGAGAGCATTGCTTTGCCAAGAGTCGTACTGTGTTTAGCTCACAATGGAAAGGTAGCATGGGATTTGAAATGGAAACCAACTAATGCGTGTACTGACAATTGCAAGCACCGAATGGGCTACCTTGCTGTCTTGCTGGGCAATGGATCTCTAGAAGTCTGGGAGGTTCCTTTTCCTCATGCAGTGAAGGCCATCTATTCTAAATTCAATGGGGAGGGTACAGACCCTCGCTTTGTGAAGTTGAAGCCTGTTTTCAGATGCTCGATGTTGAGAACTGCGAATACACAGAGCATCCCTCTGACAGTGGAATGGTCGCTAACACCTCCTTATGATTATCTGCTCGTTGGATGTCATGATGGAACGGTCGCATTGTGGAAGTTTTCTGCAAATAGTACCTGTGAAGATACGAGGCCTTTACTTCGTTTTAGTGCAGATACAGTTCCAATAAGAGCGGTTGCATGGGCACCAAGTGAAAGCGGTCCTGAAAGTGCAAATGTGATACTTACTGCTGGCCATGGAGGTTTAAAATTTTGGGACCTAAGAGATCCTTTCCGTCCCTTGTGGGACCTTCATCCAGCACCGAGGATCATATATAGTCTGGATTGGCTTCCTAATCCTAGATGCGTTTTTTTATCCTTTGATGATGGAACATTGAGACTTCTCAGTTTGTTAAAGGCTGCATATGATGTTCCAGTAACTGGTCAACCCTTTACAGCGATAAAACAAAAAGGGCTACACACTTACTTTTGTTCATCATATGCCATTTGGAGTATTCAAGTGTCAAGGCAGACAGGCATGGTTGCGTACTGCGGTGCTGATGGAGCTGTTGTCCGTTTCCAGCTTACTACAAAAGCAGCAGACAAAGAGAATTCACGCCATCGCACCCCACATTATGTATGCGAATACTTAACCGAGGAGGGATCAATTATTACACTCCACTCTCCAGCATCAAATATTCCATTCTCTTTGAAGAAGCTGCCCAACAAATCTGAACACCCATTGTCCATGCGAGCTATTTTATCTGATTCAATGCAGTCAAATGATGGAAATCATAAAACTGCCGCAGCTCCAGCATTGGAAACTGTATCAGCCCTTTGCTCGGATGTTGATGTCGGTGTTGAATCTGGATGCGAGGAAACACTGATGTCCATCAAGAAGAAAAACCAAACTCAATCAAAGTGCAAGAAGGGAGTTGAGAACGAAGAATTGGAATGTAGCGATGAGCCTAATGATGATGCACAGATGGATGCTAATGTAGTGCCTGGTTCTGGGGATGTCTTTGAAAGTCTCCCTCCCAAATCAGTTGCAATGCATAGAGTGAGATGGAACATGAACATAGGGAGTGAAAGATGGTTGTGCTACGGTGGAGCAGCTGGAATTCTACGTTGTCAGGAGATTGTGCTGTCTGCTCTTGATATGAATTATGAGACCAGAGAAGCCATTTCAAATTGCAATAATTGTTATCACCATCGAGCCATGGTGCCTTCATTCTTGTGGGCTAAGGCGTATGTCGTGTACATGGGAGCATTACCAAAATTGGAGAGCCATGAAGTTCTAGCAGATCATCATCATAACCTCCTTGCTAATGCTGTTGGAGATGAGGAATTGGCAAGAAAAGCCAAGATTTATAGCTATGGAAGAAGCTTCAATGGATTTGCTGCAAGGCTCTTGCCCCATGAAGCCAACAAACTAGCAAAGGAAAACAGTGTGGTGTCGGTATTTCGGAGCAAGACGAGGAAACTGCATACAACAAGATCATGGGACTTTTTGGGGCTGTCGGAGGCGGCGAGCCGGCAGAACGCCGCCGCAGAATCCGACATAATAGTGGGATTGTTGGATTCGGGGATATGGATGGAGGGTCCAAGTTTTAAAGATGATGGCTATGGCGAAATTCCGTCTAAGTGGAAAGGCAAGTGTGTCACTGGCCATAACTTCACTGCCTGTAACAGGAAAGTGATCGGCGCGAGGTTCTTCAACCTTGAAAAAATAGACGACACCATCAACCAAAGCCCCGCCGACGAGATCGGTCACGGCTCCCACACCGCCTCCACAGTCGCCGGATCCGCCGTGTACGGCGCCAGTCTCTACGGCATCGCCGGAGGCACAGCGCGCGGCGGCGTCCCGGCGGCGAGAATCGCGATGTACAAAGTGTGCTGGATCTTAGGGTGCAGCGACATGGACCTGCTGGCCGGATTCGACGACGCGATCGCGGACGGAGTTGACATCATATCGGTGTCGATCGGCGGCGACTCGACGGAATTCTTCGAGGATCCGATCGCGATCGGGTCGTTTCACGCAATGGAGAAAGGGATATTGACGAGTTGCTCGGCCGGAAATAGCGGGCCGGATTTAAAGACGGTGGAGAACACGGCGCCGTGGATAATGACGGTGGCGGCTTCTACGATTGATAGGGATTTCAGTACCATCGTCAAGTTGGGTAACGATAAGAAGTTATCTGGAGTATCAGTGAACACATTTTCTCCAAAGAAGCAAATGTACCCTTTAATCTCCGGATCAAATGCAGCATTACCTAATCATACCTCTGTTGATCCAAGGTGGTGTGATTATGGGAGTCTTGATGAGAAAAAAGTGAAAGGAAAAATAGTGTATTGTTTGGGATCAGTATACCAAGAATACACCATTTCTGAGCTTGGGGGCACAGGTGTAATTTCAAATCTTATGGGCACTACTGAAATTGCTATTACCACTCCTATTCCTTCCACTCATCTTTCCTCTCTCAACTCTGACTATGTTATTGCCTACATTAACTCCACCAAAAACCCTCAAGCTGTCATTTACAAAACTACCGCAAGGAAGGTTGATGCTCCCTTTTTGGCTTACTTTTCTTCTAGAGGTCCTCAAACAATAGCTCCCCCTATTCTTAAGCCGGACATTGCAGCACCTGGGATGAACATTTTAGCAGCGTTCTCAAAATTGGCTTCAATTCCGAGCGGCAGACATTCCCTTTTCAACCTTCTTTCTGGCACTTCTATGGCTTGTCCCCACGCCGCCGCCGCCGCCGCCTATCTCAAAACCTTCCACCCCACTTGGTCCCCCGCCGCCATCAAGTCCGCCCTTATCACCACCGCAACGCCATTAAAGATCGGAGATAATTTGGACGCGATCGGCGGCGGCGCCGGCCAAATTAATCCGACCAAAGCGGTGCATCCAGGCCTCATTTACGACCTCTCTCGCACCTCTTACCTCTCTTTTCTTTGCTCCAACAAACGCTACTCCGGCACCGCCCTTGCCATCCTCACCGGAAACACCTCTTTTAACTGCTCTGCCGTCCCGCTAGCCACCGGCTACGACGCCCTCAACTACCCTTCCATGTACGTGCCCCTCGACTACGACTCCACCTCTGTTTCCGCCGTCTTCCACCGAACAGTCACCCACGTCGGATTCGGCCCATCAACGTACAAGGCAAAGGTCAAATCGCCGGCGGGTTTGTCGGTGAGAGTGTTGCCGGAGACTCTGAAATTCGATCGGGCGTACGAAAAACAATCGTTTAAGGTGGTGGTGGAAGGGGCAGCGCCCGCTGTGGGGGAGGCTCCGTTGACAGCTTCACTTGAATGGGATGATTCTAAGCATAACGTTAGGAGCCCAATTTTGGTGTTTAAGGTTTAA | 4911 | 47.26 | MEELQPQLQPLPQPSIGTTCKKGKKKPPAREKKDPEKRAKKKKPGATPSVHEHQPTGRLDNGPKVKVSEFDRCVENHFRAMDTIVELCCEAEDGDGGIDESDIQRFSSSTIFLREWRFYNYEPKTIKFAGDLRGLEVKDAEITINLPQFSSAAVLKNGAPPGATTSLDFRNFAMHVGGPVWALDWCPQVHERTDSLIKCEFIAVSAHPPGSSYHKMGIPLTGRGMVQIWCLVHGTESYEPTNVGEPPSDLSSQPKRPRGRPPGRKKNGVSALPSQPKRPRGRPKQKQEESSDKKGDSYQLVQALSIENPVGSSNLLEIDGAPKNSENFALLENSVERERSTLQEVSTCNSEDEVPAQKRRVRRKVEPRNQVDDVGVLSLTENREDGSNAINLEANENVISENSGEENLICKNISENAVLDTSSIEFSIPESIALPRVVLCLAHNGKVAWDLKWKPTNACTDNCKHRMGYLAVLLGNGSLEVWEVPFPHAVKAIYSKFNGEGTDPRFVKLKPVFRCSMLRTANTQSIPLTVEWSLTPPYDYLLVGCHDGTVALWKFSANSTCEDTRPLLRFSADTVPIRAVAWAPSESGPESANVILTAGHGGLKFWDLRDPFRPLWDLHPAPRIIYSLDWLPNPRCVFLSFDDGTLRLLSLLKAAYDVPVTGQPFTAIKQKGLHTYFCSSYAIWSIQVSRQTGMVAYCGADGAVVRFQLTTKAADKENSRHRTPHYVCEYLTEEGSIITLHSPASNIPFSLKKLPNKSEHPLSMRAILSDSMQSNDGNHKTAAAPALETVSALCSDVDVGVESGCEETLMSIKKKNQTQSKCKKGVENEELECSDEPNDDAQMDANVVPGSGDVFESLPPKSVAMHRVRWNMNIGSERWLCYGGAAGILRCQEIVLSALDMNYETREAISNCNNCYHHRAMVPSFLWAKAYVVYMGALPKLESHEVLADHHHNLLANAVGDEELARKAKIYSYGRSFNGFAARLLPHEANKLAKENSVVSVFRSKTRKLHTTRSWDFLGLSEAASRQNAAAESDIIVGLLDSGIWMEGPSFKDDGYGEIPSKWKGKCVTGHNFTACNRKVIGARFFNLEKIDDTINQSPADEIGHGSHTASTVAGSAVYGASLYGIAGGTARGGVPAARIAMYKVCWILGCSDMDLLAGFDDAIADGVDIISVSIGGDSTEFFEDPIAIGSFHAMEKGILTSCSAGNSGPDLKTVENTAPWIMTVAASTIDRDFSTIVKLGNDKKLSGVSVNTFSPKKQMYPLISGSNAALPNHTSVDPRWCDYGSLDEKKVKGKIVYCLGSVYQEYTISELGGTGVISNLMGTTEIAITTPIPSTHLSSLNSDYVIAYINSTKNPQAVIYKTTARKVDAPFLAYFSSRGPQTIAPPILKPDIAAPGMNILAAFSKLASIPSGRHSLFNLLSGTSMACPHAAAAAAYLKTFHPTWSPAAIKSALITTATPLKIGDNLDAIGGGAGQINPTKAVHPGLIYDLSRTSYLSFLCSNKRYSGTALAILTGNTSFNCSAVPLATGYDALNYPSMYVPLDYDSTSVSAVFHRTVTHVGFGPSTYKAKVKSPAGLSVRVLPETLKFDRAYEKQSFKVVVEGAAPAVGEAPLTASLEWDDSKHNVRSPILVFKV | 1636 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32797300 | 32811003 | + | CaPI482276_10g018780.1 | Cam10g1878 | 138541 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g1878 | 1636 | Pfam | Fibronectin type-III domain | 1534 | 1633 | IPR041469 | - | |
Cam10g1878 | 1636 | CDD | Peptidases_S8_3 | 1008 | 1459 | IPR034197 | - | |
Cam10g1878 | 1636 | Pfam | Subtilase family | 1033 | 1465 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Cam10g1878 | 1636 | Gene3D | Peptidase S8/S53 domain | 1034 | 1496 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cam10g1878 | 1636 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cam10g1878 | 1636 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 1423 | 1433 | IPR023828 | - | |
Cam10g1878 | 1636 | Pfam | Peptidase inhibitor I9 | 931 | 1010 | IPR010259 | - | |
Cam10g1878 | 1636 | PRINTS | Subtilisin serine protease family (S8) signature | 1101 | 1114 | IPR015500 | - | |
Cam10g1878 | 1636 | PRINTS | Subtilisin serine protease family (S8) signature | 1032 | 1051 | IPR015500 | - | |
Cam10g1878 | 1636 | PRINTS | Subtilisin serine protease family (S8) signature | 1422 | 1438 | IPR015500 | - | |
Cam10g1878 | 1636 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 931 | 1631 | IPR045051 | - | |
Cam10g1878 | 1636 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Cam10g1878 | 1636 | SMART | WD40_4 | 669 | 708 | IPR001680 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | SMART | WD40_4 | 514 | 554 | IPR001680 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | SMART | WD40_4 | 563 | 607 | IPR001680 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | SMART | WD40_4 | 434 | 483 | IPR001680 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | SMART | WD40_4 | 611 | 650 | IPR001680 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 1014 | 1483 | - | - | |
Cam10g1878 | 1636 | Gene3D | - | 1231 | 1366 | - | - | |
Cam10g1878 | 1636 | CDD | PA_subtilisin_like | 1238 | 1360 | - | - | |
Cam10g1878 | 1636 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 926 | 1010 | IPR037045 | - | |
Cam10g1878 | 1636 | MobiDBLite | consensus disorder prediction | 240 | 297 | - | - | |
Cam10g1878 | 1636 | MobiDBLite | consensus disorder prediction | 29 | 48 | - | - | |
Cam10g1878 | 1636 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Cam10g1878 | 1636 | SUPERFAMILY | WD40 repeat-like | 468 | 726 | IPR036322 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | SUPERFAMILY | Subtilisin-like | 1009 | 1487 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Cam10g1878 | 1636 | Gene3D | - | 361 | 745 | IPR015943 | GO:0005515(InterPro) | |
Cam10g1878 | 1636 | Gene3D | - | 1500 | 1635 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0649 | Cam-Chr7:12449397 | Cam10g1878 | Cam-Chr10:32797300 | 5.30E-172 | dispersed | |
Cam07g0652 | Cam-Chr7:12592077 | Cam10g1878 | Cam-Chr10:32797300 | 3.60E-168 | dispersed | |
Cam10g0387 | Cam-Chr10:6187817 | Cam10g1878 | Cam-Chr10:32797300 | 1.60E-30 | dispersed | |
Cam10g0388 | Cam-Chr10:6196927 | Cam10g1878 | Cam-Chr10:32797300 | 2.20E-141 | dispersed | |
Cam10g1878 | Cam-Chr10:32797300 | Cam11g1205 | Cam-Chr11:24014317 | 3.20E-60 | dispersed | |
Cam10g1878 | Cam-Chr10:32797300 | Cam04g1016 | Cam-Chr4:24328320 | 6.10E-229 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g1878 | - | - | - | 0.0 |