Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1891 ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATCACTACTGCCCCATCTCGCTCTCATTTCCCTTCTTCTTCCTCAATTCCCCACCATGATCTCTCCTCCTCCACGGCCGCCGCCGCCGCCTTCCGCCACCACCATAATCCCTACGACCTCATCATGATGATGCCACGTGACACTCCGCTACCCGACTTTCGCTCCGATTCCGCCACCACACCACCCGCCATCGTCTCCGCTCAGCCAGGTCCCTCCGCTTTCGAGCTCGAAACCGCCTCCATCGCCGCCGACTGCGCCACCGCTCGATGGCCTCGCCAAGAAACTCTTACTCTCTTGGATATCAGATCCCGACTTGATTCTAAGTTCAAGGAAGCCAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGAAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAACTACAGATTCTTTAGGCAGTTGGAAGCTCTCTATGGTGAAACAAGCAATTCCCCTTCACTTCCAGATTCCCATTTTGTTGGAGACACCAACCTTAGATTCCAACAGAACGGGACCAACAACCCGACTGCGGCACCTCCGATGAGCCACGAAGCTCACCAGAAGCATTACTGCGATAGCCTCAGCCTCTCGAACACGTCAGAGTTCGAAACCTCGGCCTCGTCAGATGGCAACGACGACCCCAGCTCGGTTGGCATTATGGACAACGATTCAATGGAGAAGAGGAGGAAGAAGCGAGGCGGGAAATGCTGGAAGGCGAAAATCAAACAGTTCATCGACTCGCAAATGAGGAAGCTAATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGAGAGAATGATTCGCGAGGAGGAATGGAGGAGACAAGAAGTGTCAAGAATGGATAGGGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAATCTAGAGATGCTGCATTAATGGATGCATTACAAAGGCTAACAGGACGAGAATTGAGAGATAATCAATACAACTCCTCACCCGACCTCGGATTAATCGTAGCCGAGCGTCATAGAAATAATAACGAGAACCAAAACGAGGACGGGAGCGAAATACTAAACAACAACACAGCTAGAGAATTACCAGACAACAATAATTACCAAAGGAAAATAATAGACAATCAAGGCAACAAGAAACGCAAGGAGAATTCAACATCAACAGCCACCACCTACAATCTTTACTTCCAACAAACAGATTCCACCCTTTACAGTCGTGGCAGTGGCGGTGGCGGTGGCGGACCGTACGGCGGTGCCACCGACATCAAAGAACAAAGTCCAAACAGTTCAAACGTGGGCGGTGGTGGCGGCAGCGGCGGCGTGCAAGATAATTGCTTTCGCTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTATGGGAAAATTTTGGTCTTAAACTCAACAATGGAAGTGACCAAACTTGA 1572 48.22 MEMDDQYALSDLRHLITTAPSRSHFPSSSSIPHHDLSSSTAAAAAFRHHHNPYDLIMMMPRDTPLPDFRSDSATTPPAIVSAQPGPSAFELETASIAADCATARWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNSPSLPDSHFVGDTNLRFQQNGTNNPTAAPPMSHEAHQKHYCDSLSLSNTSEFETSASSDGNDDPSSVGIMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIREEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELRDNQYNSSPDLGLIVAERHRNNNENQNEDGSEILNNNTARELPDNNNYQRKIIDNQGNKKRKENSTSTATTYNLYFQQTDSTLYSRGSGGGGGGPYGGATDIKEQSPNSSNVGGGGGSGGVQDNCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 33006809 33009604 + CaPI482276_10g018910.1 Cam10g1891 138554
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1891 523 Gene3D - 105 167 - -
Cam10g1891 523 Coils Coil 299 326 - -
Cam10g1891 523 CDD GT1 104 169 - -
Cam10g1891 523 Pfam Myb/SANT-like DNA-binding domain 104 190 IPR044822 -
Cam10g1891 523 MobiDBLite consensus disorder prediction 247 280 - -
Cam10g1891 523 PANTHER FI21293P1 92 391 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 451 491 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 211 226 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 391 434 - -
Cam10g1891 523 FunFam trihelix transcription factor PTL-like 105 167 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 504 523 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 395 421 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 247 264 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 470 485 - -
Cam10g1891 523 MobiDBLite consensus disorder prediction 211 232 - -
Cam10g1891 523 ProSiteProfiles Myb-like domain profile. 104 162 IPR001005 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2360 Cam-Chr5:31712503 Cam10g1891 Cam-Chr10:33006809 1.10E-54 dispersed
Cam08g0789 Cam-Chr8:9368873 Cam10g1891 Cam-Chr10:33006809 1.20E-34 dispersed
Cam08g0790 Cam-Chr8:9512631 Cam10g1891 Cam-Chr10:33006809 3.70E-21 dispersed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52806 PF13837 Myb_DNA-bind_4 2.40E-19 CL0123 Cam TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1891 - - - 0.0