Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g1891 | ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATCACTACTGCCCCATCTCGCTCTCATTTCCCTTCTTCTTCCTCAATTCCCCACCATGATCTCTCCTCCTCCACGGCCGCCGCCGCCGCCTTCCGCCACCACCATAATCCCTACGACCTCATCATGATGATGCCACGTGACACTCCGCTACCCGACTTTCGCTCCGATTCCGCCACCACACCACCCGCCATCGTCTCCGCTCAGCCAGGTCCCTCCGCTTTCGAGCTCGAAACCGCCTCCATCGCCGCCGACTGCGCCACCGCTCGATGGCCTCGCCAAGAAACTCTTACTCTCTTGGATATCAGATCCCGACTTGATTCTAAGTTCAAGGAAGCCAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGAAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAACTACAGATTCTTTAGGCAGTTGGAAGCTCTCTATGGTGAAACAAGCAATTCCCCTTCACTTCCAGATTCCCATTTTGTTGGAGACACCAACCTTAGATTCCAACAGAACGGGACCAACAACCCGACTGCGGCACCTCCGATGAGCCACGAAGCTCACCAGAAGCATTACTGCGATAGCCTCAGCCTCTCGAACACGTCAGAGTTCGAAACCTCGGCCTCGTCAGATGGCAACGACGACCCCAGCTCGGTTGGCATTATGGACAACGATTCAATGGAGAAGAGGAGGAAGAAGCGAGGCGGGAAATGCTGGAAGGCGAAAATCAAACAGTTCATCGACTCGCAAATGAGGAAGCTAATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGAGAGAATGATTCGCGAGGAGGAATGGAGGAGACAAGAAGTGTCAAGAATGGATAGGGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAATCTAGAGATGCTGCATTAATGGATGCATTACAAAGGCTAACAGGACGAGAATTGAGAGATAATCAATACAACTCCTCACCCGACCTCGGATTAATCGTAGCCGAGCGTCATAGAAATAATAACGAGAACCAAAACGAGGACGGGAGCGAAATACTAAACAACAACACAGCTAGAGAATTACCAGACAACAATAATTACCAAAGGAAAATAATAGACAATCAAGGCAACAAGAAACGCAAGGAGAATTCAACATCAACAGCCACCACCTACAATCTTTACTTCCAACAAACAGATTCCACCCTTTACAGTCGTGGCAGTGGCGGTGGCGGTGGCGGACCGTACGGCGGTGCCACCGACATCAAAGAACAAAGTCCAAACAGTTCAAACGTGGGCGGTGGTGGCGGCAGCGGCGGCGTGCAAGATAATTGCTTTCGCTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTATGGGAAAATTTTGGTCTTAAACTCAACAATGGAAGTGACCAAACTTGA | 1572 | 48.22 | MEMDDQYALSDLRHLITTAPSRSHFPSSSSIPHHDLSSSTAAAAAFRHHHNPYDLIMMMPRDTPLPDFRSDSATTPPAIVSAQPGPSAFELETASIAADCATARWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNSPSLPDSHFVGDTNLRFQQNGTNNPTAAPPMSHEAHQKHYCDSLSLSNTSEFETSASSDGNDDPSSVGIMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIREEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELRDNQYNSSPDLGLIVAERHRNNNENQNEDGSEILNNNTARELPDNNNYQRKIIDNQGNKKRKENSTSTATTYNLYFQQTDSTLYSRGSGGGGGGPYGGATDIKEQSPNSSNVGGGGGSGGVQDNCFRFLMGEGDQSQSGLWENFGLKLNNGSDQT | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 33006809 | 33009604 | + | CaPI482276_10g018910.1 | Cam10g1891 | 138554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g1891 | 523 | Gene3D | - | 105 | 167 | - | - | |
Cam10g1891 | 523 | Coils | Coil | 299 | 326 | - | - | |
Cam10g1891 | 523 | CDD | GT1 | 104 | 169 | - | - | |
Cam10g1891 | 523 | Pfam | Myb/SANT-like DNA-binding domain | 104 | 190 | IPR044822 | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 247 | 280 | - | - | |
Cam10g1891 | 523 | PANTHER | FI21293P1 | 92 | 391 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 451 | 491 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 211 | 226 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 391 | 434 | - | - | |
Cam10g1891 | 523 | FunFam | trihelix transcription factor PTL-like | 105 | 167 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 504 | 523 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 395 | 421 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 247 | 264 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 470 | 485 | - | - | |
Cam10g1891 | 523 | MobiDBLite | consensus disorder prediction | 211 | 232 | - | - | |
Cam10g1891 | 523 | ProSiteProfiles | Myb-like domain profile. | 104 | 162 | IPR001005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g2360 | Cam-Chr5:31712503 | Cam10g1891 | Cam-Chr10:33006809 | 1.10E-54 | dispersed | |
Cam08g0789 | Cam-Chr8:9368873 | Cam10g1891 | Cam-Chr10:33006809 | 1.20E-34 | dispersed | |
Cam08g0790 | Cam-Chr8:9512631 | Cam10g1891 | Cam-Chr10:33006809 | 3.70E-21 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52806 | PF13837 | Myb_DNA-bind_4 | 2.40E-19 | CL0123 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g1891 | - | - | - | 0.0 |