Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1910 ATGGCTTCCTGTGACGACGAGTTCTCTCTCCTCAGCGACGATCACCACCACCACCAACACCACCAATCCACCACCAACCACCATCATGTACCAACGCCTCACCACATCCATCAATCCTACGCTTCTCACCGCTTCACGCCTCGAGCGTCTTCTGTTCACGCGCCGCCGCAGCCGCCTCCTAATCAACCGGCTCAACCGATTCTCGCGCCGTCCGGAAGTCCGAAGAAAATTGGCGGCCCGATAGATGAGGAAGAGGAGGAAGAGGATGCGGAGGATTATGGTGATGCTGCTTTCTGCTCCAGTTCGTTTGATAATGGAGATCCGAATCGGCTTGGTGTTGGTGTTGATGTGCGGGTTGAAAAGAGGAAGGATCAGTCGGATGAGCTTGGGGAGGAAGGAGGTTCTTATAGTAGTTATAAAAGAGCGAAACCTTCCTCCAGTGGCGGAGAATACAGGAAGGATCGAGAGGAGTGGAGCGATGCGGCTATCTCCTGCCTCCTGGATGCATATACCGAGAAATTTACGCAGCTGAATAGGGGGAATTTGAGGGGTAGGGATTGGGAGGAAGTGGCTGCAACTGTCAGTGAACGGTGCGAGAAGCAAAGCAAGAGCGTAGAGCAGTGTAAGAATAAGGTGGATAACTTAAAAAAGAGGTATAAGTTGGAGAGGCATAGGATGAGTAACGGTGGCGTTTCGATCAGTCACTGGCCTTGGTTTAAGCAGATGGAGCAAATTGTTGGAAATTCTTTGACAATGAAGGTTGTGTCTGATGAGGATCGGAGTGTTGCCTCCTCAGGGAATACTCCGAGGATATCAAAAAGGTACGTTCTTCCCACACCCAATACTGCTGGTCACATGAATAATGTAAAACCCAAAGCAGTTACCAGTCCAAGGTGGCGAAGAGTCGTCTTTAAAATCAGTGGCACGGCTCTTGCAGGGACTGGTCCTAACAACATCGACTCAAAGGTTGCAATGGCAATCGCCAGGGAAGTTGTAATGGCTTGTCGCCTGGGTGTGGAGGTGGCAATTGTTGTTGGAGGTCGTAACTTCTTCTGTGGAGACTCTTGGGTGACTACAACAGGTTTAGATAGATGTACAGCATACCAAATTGGTATGATGGCTACTGTGATGAACTCAATACTTCTTCAGTCAGCAATAGAGAAGATGGGAGTTCAGACTCGTGTACAATCTGCATTTATGCTTCAGGAGGTTGCTGAACCATACAGCAGGCAACGTGCTATAAGGCATCTTGAGAAAGGCAGAGTAGTTATATTTGGTGGCATTGGTGCTGGCACTGGAAATCCCCTATTTTCCACTGATACGGCTGCGGCTCTTCGAGCATCTGAGATTCATGCTGAGGCAGTTCTTAAGGGTACAAATGTCGATGGGGTGTATGACTGCAATTCGCAAGACAACAATTTTACGTTCAAGCACATATCTTTTAGGGAGTTGGTATCAAGAGGTGCCACTAGCATGGACATGACCGCATTAACTTTCTGTGAAGAGAACAACATTCCTGTTGTCGTCTTTAATCTTCTTGAGCCTGGAAATATCTCAAAAGCATTATGCGGAGAGCAAAATGTTTGGTGGGCTCTTTTAAGAAACTATAGCTACCTCCTTTCAGCTTCTGGCTTCTTTCCTGGCCAGGATTGGGAGTGTTTGCTATGTTACTTGCTAAGTAACCACAGTGTGAAAGTAGAGTAG 1704 47.89 MASCDDEFSLLSDDHHHHQHHQSTTNHHHVPTPHHIHQSYASHRFTPRASSVHAPPQPPPNQPAQPILAPSGSPKKIGGPIDEEEEEEDAEDYGDAAFCSSSFDNGDPNRLGVGVDVRVEKRKDQSDELGEEGGSYSSYKRAKPSSSGGEYRKDREEWSDAAISCLLDAYTEKFTQLNRGNLRGRDWEEVAATVSERCEKQSKSVEQCKNKVDNLKKRYKLERHRMSNGGVSISHWPWFKQMEQIVGNSLTMKVVSDEDRSVASSGNTPRISKRYVLPTPNTAGHMNNVKPKAVTSPRWRRVVFKISGTALAGTGPNNIDSKVAMAIAREVVMACRLGVEVAIVVGGRNFFCGDSWVTTTGLDRCTAYQIGMMATVMNSILLQSAIEKMGVQTRVQSAFMLQEVAEPYSRQRAIRHLEKGRVVIFGGIGAGTGNPLFSTDTAAALRASEIHAEAVLKGTNVDGVYDCNSQDNNFTFKHISFRELVSRGATSMDMTALTFCEENNIPVVVFNLLEPGNISKALCGEQNVWWALLRNYSYLLSASGFFPGQDWECLLCYLLSNHSVKVE 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33164849 33169280 - CaPI482276_10g019100.1 Cam10g1910 138573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1910 567 Coils Coil 198 225 - -
Cam10g1910 567 MobiDBLite consensus disorder prediction 261 290 - -
Cam10g1910 567 FunFam Aspartate/glutamate/uridylate kinase family protein 158 221 - -
Cam10g1910 567 Pfam Amino acid kinase family 301 511 IPR001048 -
Cam10g1910 567 CDD AAK_UMPK-PyrH-Ec 300 526 IPR015963 GO:0005737(InterPro)|GO:0006221(InterPro)|GO:0033862(InterPro)
Cam10g1910 567 MobiDBLite consensus disorder prediction 52 67 - -
Cam10g1910 567 SUPERFAMILY Carbamate kinase-like 297 526 IPR036393 -
Cam10g1910 567 Gene3D - 290 532 IPR036393 -
Cam10g1910 567 Pfam Myb/SANT-like DNA-binding domain 155 245 IPR044822 -
Cam10g1910 567 MobiDBLite consensus disorder prediction 261 289 - -
Cam10g1910 567 FunFam Uridylate kinase isoform A 291 530 - -
Cam10g1910 567 MobiDBLite consensus disorder prediction 14 154 - -
Cam10g1910 567 MobiDBLite consensus disorder prediction 114 130 - -
Cam10g1910 567 PANTHER URIDYLATE KINASE 155 526 - GO:0006225(PANTHER)|GO:0033862(PANTHER)
Cam10g1910 567 Hamap Uridylate kinase [pyrH]. 297 541 IPR015963 GO:0005737(InterPro)|GO:0006221(InterPro)|GO:0033862(InterPro)
Cam10g1910 567 Gene3D - 158 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1595 Cam-Chr1:29436880 Cam10g1910 Cam-Chr10:33164849 2.60E-73 dispersed
Cam05g2883 Cam-Chr5:35862908 Cam10g1910 Cam-Chr10:33164849 5.20E-16 dispersed
Cam10g1910 Cam-Chr10:33164849 Cam03g0666 Cam-Chr3:7584890 1.50E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52809 PF00696 AA_kinase 2.10E-25 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1910 - - - 0.0