Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1929 ATGTTCAGGTTGCACAGGAACCGGCAAGCGAAATCAGGGGAGAAATTTGATTTCAAGTTCTCCAACTTCAAGGCAACCCAGGTACCTAAAGGTTGGGACAGGCTTTTTGTATCTGTCATTTCAGAGCAAACTGGGAAGACAATTGTCAGGTCAAGCAAAGCATCAGTTCGTAATGGAAGTTGCCAGTGGACTGAGTCTTTATCAGAATCCATTTGGGTTTCACAAGATGAAGTTTCGAAGGAGTTTGAAGATTGTAATTTCAAGCTTGTTGTGGCCATGGGGTCAGCAAGATCTAATATTCTTGGAGAGGCTATGGTCAACGTGACAAATTACACAGATTCTAAATCTTCTTCTGCAGTTTCACTTCCACTGAGAAAGTGCAACCATGGGACTATTTTACAAGTGAAAATCCAGTGCTTAACTCCTATTTCAAAAGTAAGGAGTGGAGAATTTAAACAGACAAATTCCCCAAAAGAAGACTTGAAGAAAGGTCATGACTCAGATAGCTGCTCGGATATTACAGATAGCCAATTGTCGAGAAGTATTGGATCTTCCTCTGGTGCAGATTTATACTCTAGCTTACACTCAGGAGAATCTAGCAGCCAGGAAGCAAGTTTCTCTGCTTCCTATTCACAGCTCAGCAATGATTCATCTGGGGTTTATGAATCCGTAGAGACTGACGCTGCAAAAAACAATTATAGTGATATTCAAAGACAAGACTCGGTGAGCTCACAGAATAGTGCTCCTTGTTTATCACCGAATTCTGTAATTACTGGTTCAGCAGAAACAACGACTATTGAGGAACTTCGTGCTGAAGCTAGGATGTGGGAGAGAAATTCCCACAAACTGATGGCTGATCTTGATCAGTTGAAGAAAGAGTTCTCAGATCAATCTAAAAACCAGGAAAGTTTGCATACTGCACTTTCAGCAGCAACTGCAGAATGTGATGGTTTGAGAAAAGAACTTGAGCAACTGAAGCTGATGACTGAGAAGTCAACACAGAGACAGACAACCATTGAGGATTTATCATATCAAGATGGTGAACCACACATCCTGAATGAATTGAAAGATGAACTGAAGTTCCAAAAAGAAACCAATGCTGATTTAGCTCTTCAGCTAAAGAGAAGTCAAGAATCAAATATTGAACTTGTGTCCGTTCTTCAGGAGCTAGAAGCAACTACCGAAAAGCAGAAACTTGAGATAGAGGAACTTTTGGCACGACACCAAAAAGATGATGATATCAAAAATATTAATGAAGAAAACAAGAAACTGATGCTTCAATTGGAGCATGTGAAGGAATCAGAGAAAAATCTTCAATTGAAGGTTGAGGTTCTGGAGAGAAACTTGGAGGAAGCAAAACTTGATTTACAAAAATGCAAGGTCTCAAACCAAAGATTCCCTCGGGATACTGAAAAGGAATACGATAGTCGGCTACACGCTGAGGAAAATGTGGGGTCCTTACACATACATCTAGTGAAAGAAATTGAAATGTTGAAAGAAAAAGTGCAGGAGTTAGAAAAGGATTGTACTGAGTTGACAGATGAAAACATGGATCTCTTGTACAAGCTTAAGCAAGCAAATAACGACTCTAAGGGAGGAAGCTTGGGTTTTAGTGCCACGGGTGGTGAGCTTTTATCTAAATCTTTTGTTAATTTTGGATTTGATTCTATGAAACACAGACATTCTACACAAATTCTAGAAGAAAAAATGGAGGAAAATTCTAATGTGATTGAGAATAACGATGGTTCTTTCAATAAAAAACTAGAGAGTATGAAATTTGAGCTGGAAGTCCAAGTTGAAGAGCTCGGTAGGGAATTGACTGGGAAAAAGCTGGAGATTGAAAAACTTGAGTCCTGCATTTTGTCCAAAGAAGACGAGATTAAGATCCTCGGAGGTTTGCATAACAAATTGCAAGCTAAGTATTCTGATCTTCAGAAAGAAAAAAATCAAATCGAGGAAAAGATGGAAGTCATACTTGGAGAAAGTGATAGCGGTTCTAAATGTTTAAATGATTTGCGAAATGAAGTAAAGGTGCTTAGTAACGGTGTGGATTTGCATATTTCTGCAAACAAGATTCTTGAAAGTAAATATTCGGAGCTTCAATGTGAAAAACAAGAGCTTGAACTCCATGTATCTCAGATTGAACAGGAACGCATACAATTGTCAGAAAGTTTATCTGTTTTGGAATCTCAACTAAACTATATGACGGACGAGAAGGAGTCAATTCTCCTTGAGTTAGAAAACTCTAAGTCTCATGCTGAGGGTCTCCAAGATGAGGTTGATAGACTGAGACTCGAGATAGAGACAGAAAATGTTGATTTGAAACAAATGTTGAATGACTTGCAAAACCAGTGTGCAAAGGCTCAAGATCAATGTGAGTACCTGCAAAGAGAAAACACGAAGTTGGAGGCTGCAGCTGAGCATCTCGTTGAAGAACGAAATTTGCTTCGAAAATCAAATGGAGAGCTGAAGAAGAAGAATTTCGAGTTGCACGAGGGTTATTTTCGCTTGGAATTGAAAGTGAAGGAATCGCTTGAAAGGTCTGCCCATTATTTCAGAAGAGTTGATGATTTCGAGGGTCATCTCTCTCTTGGGTTGGAGGATTTCGCCTCAAAAGAAAGATTCCTATCTTTGGAATTAGATTCAATTGTTGAAGAGAACATAAAATACAAAGAGAAATTTGCCATGTTTGAAAGCTTGTATAATGAAACATATTTGGAGAAGGCAACTGAGGCTAAAGAACTCCAAGGAGCAGTTGTGCACCTGACCAAACAACTTTCAGCAGCAAAGAAGGATCTCAACATCATGCGAATGGAATCTGATGAAAACTTAACGGCTCTGATTAGTGAGCTTTCCGTGTCAAAACAAAACCAAGAGACACTGGTAGCTGACAATGAAAAGTTACTGAAGCAGTTGGAAAATTACAATTCACTTGAAGTCGAACTTAAGAACTCTGTCAATGATCTTGAATTAAAGCTTTCTGTTTCTGAAAAAGAACGAAGGCAGCATGAGGAAGAATTAACTAACTTAAAGGTTCAGTTGCAGAAAACAGCCCATTTTCAGGATGAGTTTTTTGCATCGAGCAACAAGCTTGAACAGAAGACTGTTGATGAACTAGAGGACAGCAAACAGAGCGGAGTTGCCTTGAAGGAAAAGTTTCTTAGAATAGGGAGTGGGTCAGTAGTGGAAAAGTACCAACAGAAACTTAAAATACTGGAGGAGGAGAAAGATGAGTACCTAAAAAGATCTCAATCCCTTGAAGCAGAACTGAAACATTTAAAGGAGGAAAAACAGTTCCAGCGGGAGTCTAGCAATGTAAGGGTTCATGGGTTTTCCAAAACCAACGGCAAAAACATGCCCAGTAAAGACACGAAGCTTCTAAAAAATGATGTGGTGAAGACAGTTGGTCAAAATCACAGTGGCAAGAAGAAGCCTAAGGACCCGAACAACAGTCAATCTCAATCTCAAATTAAGTCTGGACAGGATGATAGTGGATGTGATATTGATGATGAAGGGCCTCATGTTCCTGAAGCTAGATCAGTTTCAAGAATTCAGTTGCTCGAAAAAGAACTTGCTGAGGCTTTGGAAGCGAACAAGAAATATGAAGATCAGCTGAGCAGGCTTGTTTCAGACAGTCAAAACAACAAAGAAAATTCTCCCATATCAACTGGTGAAGGTGGTCCAGTGACGAAGGAAGGATATGAAAGCATTAACTCGGCTTTAGAGGCGGAGTTAAAAGACATTCGTGAGCGGTACTTCCACATCAGCCTCAAGTATGCTGAAGTTGAACATCAGCGAGAGGAACTTGTTATGAAGCTGAAAGCAGCTAAGAACAGTGGAAGGAGTGCCAAACATTACGCCATAGAAATTGAAACTGAACTTTCAAGACAAGCTGATTATGATACAATTATGGGAGTGGCAGCTCTCATAAAACCATGGAAGGTTCTAGGGATACCTTCGGAGCAAAAGCCTAAGGGTAGGTTGTTGAGATTTGAGAGGCAAATGCAATATACAGGAAAGGAACAAAAGAAGGAGATAGTGTTGTCACACTTGGAACAGAATAAGAAGGTGAAAAGTGGTCGCACACCAATCTTGGGGTCACGTCAGTCTCTTGATTTGCCTTCCTTCTCTGCCTGCCGATCTCCTATAACAACTAATGCCAGCTTCTTTATCAAACCCTCTAAACAACAGCACCCAACCCCACCACCACTTTCTTCCATGCCCCTCTCACCCGCCACCCCAGCGGTGGCCGGCGGTGATGGAGATTCCACTTTTGGTGGAGATGTGGGGGCAGAGGAGATCTTCCTCACTTCCTCTGTTAAGGGCAACTCCCATCCTTTGGCATTTCTCCAAAATTCCCAGAAAAAATCTCACTGTTCTGATGTGGGCATCGAGAAAGTTCAGTACTCTTGGATTCAGTAG 4422 40.5 MFRLHRNRQAKSGEKFDFKFSNFKATQVPKGWDRLFVSVISEQTGKTIVRSSKASVRNGSCQWTESLSESIWVSQDEVSKEFEDCNFKLVVAMGSARSNILGEAMVNVTNYTDSKSSSAVSLPLRKCNHGTILQVKIQCLTPISKVRSGEFKQTNSPKEDLKKGHDSDSCSDITDSQLSRSIGSSSGADLYSSLHSGESSSQEASFSASYSQLSNDSSGVYESVETDAAKNNYSDIQRQDSVSSQNSAPCLSPNSVITGSAETTTIEELRAEARMWERNSHKLMADLDQLKKEFSDQSKNQESLHTALSAATAECDGLRKELEQLKLMTEKSTQRQTTIEDLSYQDGEPHILNELKDELKFQKETNADLALQLKRSQESNIELVSVLQELEATTEKQKLEIEELLARHQKDDDIKNINEENKKLMLQLEHVKESEKNLQLKVEVLERNLEEAKLDLQKCKVSNQRFPRDTEKEYDSRLHAEENVGSLHIHLVKEIEMLKEKVQELEKDCTELTDENMDLLYKLKQANNDSKGGSLGFSATGGELLSKSFVNFGFDSMKHRHSTQILEEKMEENSNVIENNDGSFNKKLESMKFELEVQVEELGRELTGKKLEIEKLESCILSKEDEIKILGGLHNKLQAKYSDLQKEKNQIEEKMEVILGESDSGSKCLNDLRNEVKVLSNGVDLHISANKILESKYSELQCEKQELELHVSQIEQERIQLSESLSVLESQLNYMTDEKESILLELENSKSHAEGLQDEVDRLRLEIETENVDLKQMLNDLQNQCAKAQDQCEYLQRENTKLEAAAEHLVEERNLLRKSNGELKKKNFELHEGYFRLELKVKESLERSAHYFRRVDDFEGHLSLGLEDFASKERFLSLELDSIVEENIKYKEKFAMFESLYNETYLEKATEAKELQGAVVHLTKQLSAAKKDLNIMRMESDENLTALISELSVSKQNQETLVADNEKLLKQLENYNSLEVELKNSVNDLELKLSVSEKERRQHEEELTNLKVQLQKTAHFQDEFFASSNKLEQKTVDELEDSKQSGVALKEKFLRIGSGSVVEKYQQKLKILEEEKDEYLKRSQSLEAELKHLKEEKQFQRESSNVRVHGFSKTNGKNMPSKDTKLLKNDVVKTVGQNHSGKKKPKDPNNSQSQSQIKSGQDDSGCDIDDEGPHVPEARSVSRIQLLEKELAEALEANKKYEDQLSRLVSDSQNNKENSPISTGEGGPVTKEGYESINSALEAELKDIRERYFHISLKYAEVEHQREELVMKLKAAKNSGRSAKHYAIEIETELSRQADYDTIMGVAALIKPWKVLGIPSEQKPKGRLLRFERQMQYTGKEQKKEIVLSHLEQNKKVKSGRTPILGSRQSLDLPSFSACRSPITTNASFFIKPSKQQHPTPPPLSSMPLSPATPAVAGGDGDSTFGGDVGAEEIFLTSSVKGNSHPLAFLQNSQKKSHCSDVGIEKVQYSWIQ 1473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33341257 33348925 + CaPI482276_10g019290.1 Cam10g1929 138592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1147 1162 - -
Cam10g1929 1473 Coils Coil 585 605 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1209 1232 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 152 170 - -
Cam10g1929 1473 Coils Coil 746 812 - -
Cam10g1929 1473 Coils Coil 690 731 - -
Cam10g1929 1473 Coils Coil 1259 1279 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1096 1180 - -
Cam10g1929 1473 Coils Coil 912 932 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 149 181 - -
Cam10g1929 1473 PANTHER PROTEIN MLP1-LIKE 1 555 - -
Cam10g1929 1473 Coils Coil 1062 1103 - -
Cam10g1929 1473 Coils Coil 352 372 - -
Cam10g1929 1473 Coils Coil 266 293 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1104 1122 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 237 263 - -
Cam10g1929 1473 Coils Coil 308 335 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1392 1424 - -
Cam10g1929 1473 Coils Coil 634 661 - -
Cam10g1929 1473 Coils Coil 1184 1218 - -
Cam10g1929 1473 Coils Coil 1231 1251 - -
Cam10g1929 1473 Coils Coil 387 462 - -
Cam10g1929 1473 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1163 1180 - -
Cam10g1929 1473 Coils Coil 488 529 - -
Cam10g1929 1473 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 140 IPR019448 -
Cam10g1929 1473 Coils Coil 965 1013 - -
Cam10g1929 1473 MobiDBLite consensus disorder prediction 1209 1225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0901 Cam-Chr3:11649677 Cam10g1929 Cam-Chr10:33341257 1.80E-27 transposed
Cam07g0819 Cam-Chr7:20559376 Cam10g1929 Cam-Chr10:33341257 1.70E-21 transposed
Cam10g1929 Cam-Chr10:33341257 Cam08g1239 Cam-Chr8:18740045 1.80E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1929 - - - 0.0