Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g1964 ATGGCCGCCTCAAATTCCACCTCCCCCAACCCCTTCTGGTACCAGTTGTTCTTTGGCCGGTGGTTCTCTGTTTTTGCTTCCATTCTCATCATGTCCGTCTCCGGCGCCACCTATATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTAGGCTACGACCAAACCACCGTCAATTTGCTCAGCTTCTTCAAGGACTTAGGCGGCAATGTCGGCGTCATCAGCGGCCTCATCAACGAGGTCGCTCCGGCCTGGATCGTTCTTCTCATCGGCGCCATCATGAACCTTTTCGGCTACACCATGATTTGGCTGGCTGTAACCAATCGGATCCCCAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGTATAGGAGCTAATTCTCAGACCTTTGCTAATACAGGGGCTCTGGTAACCTCCGTCAAAAACTTCCCGGAAAGTCGTGGTAGCGTTTTGGGACTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCTATTTTGTCCCAGCTTTTCCATGCCTTTTACGGCAACAACTCCAAGTCTCTTATCCTCTTAATCGCTTGGCTTCCTGCAGCCGTCTCTGTTACTTTCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTTAGCCTTGCTGGCATCGATATGATAATTATTTTTATCGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCAATCGACAATTTGGGCCAAATCGGAGAGTCTTTAGGATACCCATCTCACAGTACCACCACATTCATCTCTCTTGTCAGCATATGGAATTACCTCGGCCGTGTAGTCTCCGGATTCGTATCAGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTATTTCTCTTCGCGACACTTATTTTATCCTGCGTCGGCCATCTTCTAATCGCATTCGGAGTTCCAAATTCGCTGTATTTTTCTTCAATCATAATTGGGTTCTGCTTTGGTGCACAATGGCCGTTGATCTTCGCAATCATATCGGAAATTTTCGGGCTGAAGTACTACGCAACTCTATACAATTTGGGAGGAACGGCGAGCCCGATTGGGGCGAAGTTCAGGGAGGAGGAAGGTGAAGACGTAGACATGAAAATTGCCGCTCCAACAAATAGTGTGTTGACGGCCACAAAATCTGAATCTGTTTAG 1203 47.8 MAASNSTSPNPFWYQLFFGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTVNLLSFFKDLGGNVGVISGLINEVAPAWIVLLIGAIMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFANTGALVTSVKNFPESRGSVLGLLKGFVGLSGAILSQLFHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRIIKDLRQPNELKVFYHILYISLSLAGIDMIIIFIATICGVGGTLTAIDNLGQIGESLGYPSHSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGTASPIGAKFREEEGEDVDMKIAAPTNSVLTATKSESV 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33579453 33581198 - CaPI482276_10g019640.1 Cam10g1964 138627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g1964 400 CDD MFS_Mch1p_like 19 370 - -
Cam10g1964 400 Pfam Nodulin-like 20 237 IPR010658 -
Cam10g1964 400 Gene3D MFS general substrate transporter like domains 221 372 IPR036259 -
Cam10g1964 400 SUPERFAMILY MFS general substrate transporter 24 369 IPR036259 -
Cam10g1964 400 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 226 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g1964 Cam-Chr10:33579453 Cam11g0738 Cam-Chr11:9204577 2.00E-56 dispersed
Cam10g1964 Cam-Chr10:33579453 Cam10g1967 Cam-Chr10:33606239 3.10E-118 proximal
Cam10g1964 Cam-Chr10:33579453 Cam04g0964 Cam-Chr4:23683751 2.10E-135 wgd
Cam10g1964 Cam-Chr10:33579453 Cam05g2329 Cam-Chr5:31342122 5.60E-144 wgd
Cam10g1964 Cam-Chr10:33579453 Cam08g1228 Cam-Chr8:18654438 3.60E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g1964 - - - 0.0