Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g2007 ATGTTGAATTTCTCTCCAATTTCCTCATCCATTACCTTCACATTACTTCTTTTTTCCTTTTCCAATACTGGCATTTTAGATTTCACCGCCACCGTTGCCGCCGTTGAATTTGACTTCGGCACTGTCGCCCTCAGTAGTTTAAAGCTACTCGGCGATGCCCACTTGAACAACGGGAGCGTGAGGCTCACTCGAGACCTTGCCGTCCCAAATTCCGGCTCCGGCAGAGTCCTCTACGCCAAACCCATCAGATTCCGGCAGCCAGGGATTAATTACCTCGCCAGTTTCTCCACATTTTTCTCCTTCTCCGTCACTAATCTCAACCCGTCGTCGATCGGTGGTGGTTTGGCGTTTGTGATATCTCCAGACGCCGAAACGCTCGGCGGAGCTGGTGGGTTGTTGGGGCTGGCCGATGAGAGGGGATTGGGGTTCGTGGCGGTGGAATTCGACACGTTAATGGATGTGGAATTTAAAGACATTAATGGAAACCATGTGGGATTGGATCTGAACGAAATGGTTTCGTTAGAGGTTAAAGATCTTGACGGAATTGGAATGGATCTCAAAAGCGGCGATACCGTTAATTCGTGGATTGAATACGACGGCTTGGCTCGGATCTTCAAAATCTTCGTTTCTTATTCGAATTTGAAACCGACAGAACCTCTAATGTCGTTCAATCTCGATCTTGATCCGTATTTGAACGATTTTATGTACGTTGGATTTTCCGGTTCAACACAGGGGAGTACGGAAGTTCACAGTGTGGACTGGTGGAGCTTTACGTCGTCGTTTGACTCAAATTCACCACCTGGGTCGGTTCCGCCGCCGCCAACGACGACGCTGATGAACCCAACGGCGAATGTCGTTCGTTCACCGCCGCCGTCGCAACCGCCATCGGATTCAGATTCCGTCACGCAAAAGAACTCCAAGTCGACGTCCTGCCACAATGGGCTCTGTAAGCAAGGCGCTGGTGCAGTGGTCGGAGTTGTGACCGCGGGGGCTTTTGTTCTAGCATTATTTGCCGGCGGGTTAATTTGGGTATATTCCAAAAAGATCAAGCGGGTTAAAAAATCGGATTCCCTCGCTTCAGAAATCATCAAAATGCCTAAGGAATTCACATACAAGGAGCTCAAAATCGCTACCAAATGCTTCAATTCGAACAGAATCATCGGCCATGGCGCTTTTGGGACTGTTTATAAAGGGATTCTGCCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGCAGCCATAGTACACAAGGGAAAAATGAATTCCTCTCTGAACTTTCAATCATCGGAACTCTCCGCCACCGGAATTTAGTGCGTCTTCAAGGATGGTGTCACGAGAAAGGCGAAATTTTACTCGTTTACGATTTAATGCCAAATGGAAGTTTAGATAAAGCACTATTCGAAGCTAGAACGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTTCTAGGCGTCGCCTCTGCTTTGGCTTATTTGCATCAAGAATGTGAAAATCAAGTCATTCATAGAGACGTTAAAACCAGCAATATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGATTGGCCCGACAAGTGGAGCACGATAAATCGCCGGACGCTACCGTCGCCGCCGGTACAATGGGATACTTAGCGCCGGAATATCTCCTCACAGGACGAGCCACGGAAAAAACCGACGTGTTTAGCTTCGGCGCCGTCGTTCTCGAAGTCGCTAGCGGCAGACGGCCGATCGAAAAAGAGACTGCCGCCGTTGGCGGCGGCGGAAAATTCGGTGTCAACAGTAATTTGGTGGACTGGGTTTGGAGTTTACACCGGGAAGGCCGGTTGTTAACGGCGGCAGATGGGAGACTCGGCGGCGAGTTTGAGGAATCCGAGATGAGGAAAGTTTTGTTAGTTGGGTTAGCTTGTTCTCACCCGGATCCGATGACCCGACCCACGATGAGAGGCGTAGTGCAAATGTTAATCGGCGATGCGGAGATTCCGATCGTCCCTCGGTCTAAGCCGTCAACGAGCTTCAGTACTGCTCATTTGCTTCTCACTTTACAAGACAGCGTGTCCGATCTCAACGGCATGATCGCCATTTCCACTTCCTCGTCCGAGCACAGCTTCAAGGGCGAGGATTTAATCTCACTGGATGATCGGACGGCGGGAAATCCATCAATTGTTTGA 2178 49.91 MLNFSPISSSITFTLLLFSFSNTGILDFTATVAAVEFDFGTVALSSLKLLGDAHLNNGSVRLTRDLAVPNSGSGRVLYAKPIRFRQPGINYLASFSTFFSFSVTNLNPSSIGGGLAFVISPDAETLGGAGGLLGLADERGLGFVAVEFDTLMDVEFKDINGNHVGLDLNEMVSLEVKDLDGIGMDLKSGDTVNSWIEYDGLARIFKIFVSYSNLKPTEPLMSFNLDLDPYLNDFMYVGFSGSTQGSTEVHSVDWWSFTSSFDSNSPPGSVPPPPTTTLMNPTANVVRSPPPSQPPSDSDSVTQKNSKSTSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLASEIIKMPKEFTYKELKIATKCFNSNRIIGHGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSFGAVVLEVASGRRPIEKETAAVGGGGKFGVNSNLVDWVWSLHREGRLLTAADGRLGGEFEESEMRKVLLVGLACSHPDPMTRPTMRGVVQMLIGDAEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNGMIAISTSSSEHSFKGEDLISLDDRTAGNPSIV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33952059 33954236 + CaPI482276_10g020070.1 Cam10g2007 138670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g2007 725 Gene3D - 32 268 - -
Cam10g2007 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g2007 725 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246(InterPro)
Cam10g2007 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 457 675 - -
Cam10g2007 725 Pfam Legume lectin domain 36 264 IPR001220 GO:0030246(InterPro)
Cam10g2007 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 345 456 - -
Cam10g2007 725 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 270 - -
Cam10g2007 725 ProSiteProfiles Protein kinase domain profile. 381 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2007 725 Gene3D Phosphorylase Kinase; domain 1 343 456 - -
Cam10g2007 725 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Cam10g2007 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524(InterPro)
Cam10g2007 725 PANTHER - 39 673 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Cam10g2007 725 MobiDBLite consensus disorder prediction 261 308 - -
Cam10g2007 725 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 270 IPR013320 -
Cam10g2007 725 Gene3D Transferase(Phosphotransferase) domain 1 457 663 - -
Cam10g2007 725 CDD STKc_IRAK 387 657 - -
Cam10g2007 725 SMART serkin_6 381 657 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2007 725 Pfam Protein kinase domain 382 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2007 725 SUPERFAMILY Protein kinase-like (PK-like) 363 687 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0803 Cam-Chr10:15921734 Cam10g2007 Cam-Chr10:33952059 1.40E-110 dispersed
Cam10g1727 Cam-Chr10:31320963 Cam10g2007 Cam-Chr10:33952059 2.30E-97 dispersed
Cam10g2007 Cam-Chr10:33952059 Cam10g2096 Cam-Chr10:34632247 5.10E-111 dispersed
Cam02g0329 Cam-Chr2:4033471 Cam10g2007 Cam-Chr10:33952059 9.90E-104 transposed
Cam03g0405 Cam-Chr3:5156276 Cam10g2007 Cam-Chr10:33952059 3.90E-10 transposed
Cam03g0416 Cam-Chr3:5204448 Cam10g2007 Cam-Chr10:33952059 3.90E-10 transposed
Cam03g0725 Cam-Chr3:8140849 Cam10g2007 Cam-Chr10:33952059 3.50E-17 transposed
Cam08g1105 Cam-Chr8:17425639 Cam10g2007 Cam-Chr10:33952059 4.50E-118 transposed
Cam10g0417 Cam-Chr10:6522283 Cam10g2007 Cam-Chr10:33952059 3.30E-173 transposed
Cam10g2007 Cam-Chr10:33952059 Cam04g0924 Cam-Chr4:23350593 2.10E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85521 PF00069 Pkinase 5.60E-50 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g2007 - - - 0.0