Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g2033 ATGGCTGCTCTCGTGGAAGAGGTTCTACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCTCTGTTCGACGGAACTACTAGGTTATATACTGCTTACATATGCCCCTATGCTCAACGTGTGTGGATCACCCGAAATTACAAGGGACTACAAGATAAAATTAAGCTAGTTCCTCTCAACCTTTATAACAGGCCTGACTGGTATAAGGAGAAAGTATACCCTATAAACAAGGTGCCATCTCTAGAACATAATGGGAAAGTTATTGGAGAAAGTCTTGATCTGATCAAATATGTTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACGTTTAACATCGCAGTAGCTTCTTCATTTAAAGGCGACACCGCAAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGCAAAAATTTGATGGCCCCTTCTTCCTTGGAGAGATCAGTCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCAGGTTTTCTTATTAGAGGCTCTCAAGATTGACATCACAGAAGGAAGGCCGAAGCTAGCTGCATGGATTGAGGAGCTCAATAAGATTGATGCGTACAAGCAAACAAAAGCTGATCCCAAGCTAATTGTTGAAGCTTATACAAAGCGATTTTTGGTTGAAGAGATGACACGAATAAATTACCCAACACATCGACGGGAATTTTTCGGTGTTTGTTCTATACTTTCTATGTATTTTGGTGTGTTTGAAGCAATTAGTCTGTATGTCGCTGCTCGCGTTCGCTTCCTCCGATTCCCTATATATACATCTCTCAATGAAGCGGCCATATATCTCATTCGAAGAACATCCATGGCGTCCCCCTACGTGGAAGAAATTCCACCTCCGTCGTTGGATGCCACCGCCGAACAACCTCCCCTGTTTGATGGAACTACCAGGTTGTATACTGCTTACATTTGCCCTTATGCACACCGTGTTTGGATCATCCGGAATTACAAGGGACTACAACATAAAATAAAGCTTGTTCCTCTCAATCTTATTAATAGGCCTGACTGGTATAAGGAGAAAGTGTACCCTATGAACAAGGTGCCATCTCTGGAACATAATGGAAAAGTTATCGGAGAAAGCCTTGATCTGCTCAAATATATTGATAGCAACTTTGAAGGACCTTCTCTTCTCCCAGATCCTGCTAAAAGAGAGTATGCCGAAGAGTTGCTATCCTACGGCGAAACGTTTAACGGCGCAATAATCGATTCGTTTAAAGGTGACACCGCTAAGGAAGCAGGTGCTCAATTTGATTACTTGGAAAATGCTTTGGGAAAATTTGATGGCCCGTTCCTCCTTGGAGAAATCAGCCAGGTGGATATAGCATACATTCCATTTGTTGAAAGGTTCCACATTTTCTTATTAGAGGCTCTCAAAATTGACATCACAGAAGGAAGGCCTAAATTACTTGCCTGGATTGAGGAGTTCAATAAGATTGGTGCGTACAAGCAAACAAAAGTCGATCCCAAAGTTAAAGAACGAGTGCTGGAGAGGCCGTATATTGCCTTAACGAATAAGCAGTACATCATGTTGATGAGCAATTTTGATGTTTGTACTTCTTATCTCCTTTCTATACCTTCTCCACCCGCTAATGGCGGAGAGGAGCATTCACATGCTCCACATTCTCGAGCCGAGAAGTATGTTGTTGTCCTTGTTGAGCAAGCGCTTATTGGAGGTAGATTCCAGGTGGGTCGGTATATTGGGGATGCCTATGGATTTGCTCTGAGACCTCAACACACGCATAGATATAGAGAGCATGCTAACATTTACAAGGAGGAGGAAGAGGAAAGGTGTGATAAGTGGAAGAACTTTCTTGATCAAGTAGCTACATCAGTTCAAGTGTGTCCTCTTGAGGAGGCAAATACAAATACACTGCAGGCTGAAACTAGCGAGCACCAAGAAGAGACCGTATCGGGGAGGAGTAGCACAGGGGATGACTCAACTGGCTCAAAATCTGATTCTGTTGACACCACAGATAGTGTTCCTACAAAACTCTTAGAGCCTCCAGTAGAAACACAAAAACGTGTTGTTCAGACTTGGTGTCAAACTAGGCCGTCTCTAAATGCCATTGAGATTATGATGAGCTCTCGTGTTAAAAAGAAGATTATGAAAGATGAAAAGACAAGTAATGGTGGAGATCATCTTCCACTGCTAGAGGAGGCAGAATCTTTAGAAGGAACATCTGTGGCAAACTCTGAAGAGGAAGAAGCTTGCTTCAGTGGAGCACTAAATCGTAGTACATCTGCTACTGGGGCAGAAAGTAGGATGGACGAATCCATTTCTAACAGTGTGAATCCCTCCGAGAGAGATGGTGTTGTGGGGGATGGAGTTTCTCAAGATCAATTGTTTACATGGAAAGAAGAATTAGAATGCCTTGTTCGTGGGGGGTTGCCAAAAGATCTGAGGGGAGAGGTGTGGCAAGCCTTTGTAGGTGTAAAGACCCGTCGAATTGAGAAATATTACCAGGATTTGTTGGACCAAGAAACTAATTGTAGTGCAGATAACGAGAACAATATCCCATCTGGTGTACCGATAAAATTGAAAAAACAGATTGAGAAGGATATACCACGGACATTTCCTGGTCATCCTGCCCTGGATGAGAATGGTAGAGACTCCTTAAGGCGTTTACTTTTAGCATATGCTCTTCACAATCCCTCTGTTGGTTACTGTCAGGCAATGAATTTCTTTGCGGGCTTGTTGCTACTCCTGATGCCCGAGGAGAATGCCTTTTGGACTTTGGTTGGAATAATAGATGACTATTTTGATGGATATTACACTGAGGAAATGATAGAATCGCAGGTGGACCAGCTTGTTTTTGAGGAATTGATGCGTGAAAGATTTCCTAAATTGGTTAAACATTTGGATTACTTGGGAGTGCAAGTGGCATGGATCACAGGACCTTGGTTCCTTTCCATTTTTGTAAATATGCTTCCGTGGGAGAGTGTACTCCGAGTTTGGGATGTGCTTCTGTTTGAAGGCAACAGAGTCATGCTGTTCCGGACAGCACTTGCATTGATGGAACTATATGGTCCTGCATTAGTGACTACAAAAGATGCGGGGGACGCCATAACTCTGTTACAATCCCTTGCTGGTTCCACATTTGATAGTAGCCAGCTTGTGTTGACTGCTTGCATGGGTTTTCTGACTGTAACTGAAGTAAGACTAGTAGAGTTGAGAGAAAAGCTCCGACCATCTGTGCTAGCTGTAATTGAAGAAAGAACAAAGAAGGGTCGGGTTTGGAAGGATTCCAAAGGGCTAGCTTCCAAGCTTTATAGTTTCAAGCATGATCCCGGATCACCTATGGAGAGGAAAAAGACAGCTGCAGGAGCCGATGTAGGATCCTGTACCCCTAATCTGGATGACTTCCTTAGTGGATTAGCCGGTGATTCAGAAACAGAATCACTCCCAGACCTTCAAGAACAAGTAGTATGGTTGAAGGTTGAGTTGTGCAGGTTGCTGGAGGAAAAAAGATCTGCGGTTCTAAGAGCCGAGGAGCTAGAAACAGCACTTATGGAAATGGTCACCCAAGATAATCGACGACTATTAAGTGCCAGGGTTGAACAACTGGAGATAGAGGTAGCCGAGCTAAAGAAAACTCTAGCAGAGAAGAAAGAACAAGAAGTTGCAATGCTTCAGTTGTTGATGCGTGTTGAGCAAGAGCAAAGAGTAACCGAGGAAGCTAGAATAAACGCCGAGCAAGACGTAGCAGCTCAAAAATATGCTGTTCATATGCTTCAGGATAAATATGAGAAAGCTATGGCTTCACTTGCCGAGATGGAGAAAAGGGTGGTGATGGCCGAATCCATGTTGGAGGCTACATTACAATATGAATCTGGCCAAGTTAAAGCAATGTCATCTCCTGGGTCGCGTAATCAAGGATCTGCACAGGAAAATCAAAGAAAGGTTGGTTTGCTGCCATTTGCACTAGGCTGGCGAGATCGAAACAAGCTTGAATTTCTATTCTCAAATTGGGTCGACTGGCGTAGCTTAGAGGATCTTTCTTTTAGTTTTCTTCACATTAGCAGAATGGAAAGGCTTTTTCTTTGGGTGAAGAACCTTAATTTCAGAGTGAAGTTCCAACAGCTAAGTGACCCGTTCAGGAGACCACTAAAAGATACTGGATTCAACCTTAAAAATCTCATTAACCTGCATCAGTCCAAGAACAAGCACCGTCCAGTGCATTCAATCAAGCTTTTGAATCACCTATGGTACTCCTCCTCGTAG 4305 43.34 MAALVEEVLPPSLDATAEQPPLFDGTTRLYTAYICPYAQRVWITRNYKGLQDKIKLVPLNLYNRPDWYKEKVYPINKVPSLEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTFNIAVASSFKGDTAKEAGAQFDYLENALQKFDGPFFLGEISQVDIAYIPFVERFQVFLLEALKIDITEGRPKLAAWIEELNKIDAYKQTKADPKLIVEAYTKRFLVEEMTRINYPTHRREFFGVCSILSMYFGVFEAISLYVAARVRFLRFPIYTSLNEAAIYLIRRTSMASPYVEEIPPPSLDATAEQPPLFDGTTRLYTAYICPYAHRVWIIRNYKGLQHKIKLVPLNLINRPDWYKEKVYPMNKVPSLEHNGKVIGESLDLLKYIDSNFEGPSLLPDPAKREYAEELLSYGETFNGAIIDSFKGDTAKEAGAQFDYLENALGKFDGPFLLGEISQVDIAYIPFVERFHIFLLEALKIDITEGRPKLLAWIEEFNKIGAYKQTKVDPKVKERVLERPYIALTNKQYIMLMSNFDVCTSYLLSIPSPPANGGEEHSHAPHSRAEKYVVVLVEQALIGGRFQVGRYIGDAYGFALRPQHTHRYREHANIYKEEEEERCDKWKNFLDQVATSVQVCPLEEANTNTLQAETSEHQEETVSGRSSTGDDSTGSKSDSVDTTDSVPTKLLEPPVETQKRVVQTWCQTRPSLNAIEIMMSSRVKKKIMKDEKTSNGGDHLPLLEEAESLEGTSVANSEEEEACFSGALNRSTSATGAESRMDESISNSVNPSERDGVVGDGVSQDQLFTWKEELECLVRGGLPKDLRGEVWQAFVGVKTRRIEKYYQDLLDQETNCSADNENNIPSGVPIKLKKQIEKDIPRTFPGHPALDENGRDSLRRLLLAYALHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDDYFDGYYTEEMIESQVDQLVFEELMRERFPKLVKHLDYLGVQVAWITGPWFLSIFVNMLPWESVLRVWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAITLLQSLAGSTFDSSQLVLTACMGFLTVTEVRLVELREKLRPSVLAVIEERTKKGRVWKDSKGLASKLYSFKHDPGSPMERKKTAAGADVGSCTPNLDDFLSGLAGDSETESLPDLQEQVVWLKVELCRLLEEKRSAVLRAEELETALMEMVTQDNRRLLSARVEQLEIEVAELKKTLAEKKEQEVAMLQLLMRVEQEQRVTEEARINAEQDVAAQKYAVHMLQDKYEKAMASLAEMEKRVVMAESMLEATLQYESGQVKAMSSPGSRNQGSAQENQRKVGLLPFALGWRDRNKLEFLFSNWVDWRSLEDLSFSFLHISRMERLFLWVKNLNFRVKFQQLSDPFRRPLKDTGFNLKNLINLHQSKNKHRPVHSIKLLNHLWYSSS 1434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34166678 34187801 - CaPI482276_10g020330.1 Cam10g2033 138696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g2033 1434 Gene3D Glutaredoxin 297 400 - -
Cam10g2033 1434 Gene3D Glutaredoxin 1 103 - -
Cam10g2033 1434 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Cam10g2033 1434 SUPERFAMILY GST C-terminal domain-like 102 231 IPR036282 -
Cam10g2033 1434 MobiDBLite consensus disorder prediction 768 795 - -
Cam10g2033 1434 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 840 950 - -
Cam10g2033 1434 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Cam10g2033 1434 MobiDBLite consensus disorder prediction 667 688 - -
Cam10g2033 1434 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 808 980 IPR035969 -
Cam10g2033 1434 CDD GST_C_Lambda 111 227 - -
Cam10g2033 1434 Pfam Glutathione S-transferase, N-terminal domain 326 402 IPR004045 -
Cam10g2033 1434 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Cam10g2033 1434 SFLD Glutathione Transferase (cytosolic) 28 208 IPR040079 -
Cam10g2033 1434 SFLD Glutathione Transferase (cytosolic) 325 503 IPR040079 -
Cam10g2033 1434 FunFam Lambda class glutathione S-transferase 104 234 - -
Cam10g2033 1434 ProSiteProfiles TBC/rab GAP domain profile. 823 1020 IPR000195 -
Cam10g2033 1434 SMART tbc_4 820 1044 IPR000195 -
Cam10g2033 1434 Pfam Glutathione S-transferase, C-terminal domain 442 501 - -
Cam10g2033 1434 Pfam Glutathione S-transferase, C-terminal domain 146 205 - -
Cam10g2033 1434 SFLD Main (cytGST) 28 208 - -
Cam10g2033 1434 Coils Coil 1269 1296 - -
Cam10g2033 1434 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 852 950 - -
Cam10g2033 1434 FunFam Glutathione S-transferase L2, chloroplastic 297 400 - -
Cam10g2033 1434 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 957 1072 IPR035969 -
Cam10g2033 1434 Pfam Rab-GTPase-TBC domain 827 1038 IPR000195 -
Cam10g2033 1434 Coils Coil 1206 1261 - -
Cam10g2033 1434 MobiDBLite consensus disorder prediction 651 699 - -
Cam10g2033 1434 Gene3D - 104 235 - -
Cam10g2033 1434 Gene3D - 401 526 - -
Cam10g2033 1434 SUPERFAMILY GST C-terminal domain-like 400 517 IPR036282 -
Cam10g2033 1434 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Cam10g2033 1434 SUPERFAMILY Thioredoxin-like 317 404 IPR036249 -
Cam10g2033 1434 Gene3D - 951 1090 - -
Cam10g2033 1434 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 242 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cam10g2033 1434 FunFam TBC1 domain family member 8B 951 1091 - -
Cam10g2033 1434 MobiDBLite consensus disorder prediction 759 802 - -
Cam10g2033 1434 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 322 403 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g2033 Cam-Chr10:34166678 Cam10g2034 Cam-Chr10:34191771 4.90E-97 tandem
Cam02g0870 Cam-Chr2:11771464 Cam10g2033 Cam-Chr10:34166678 1.20E-42 transposed
Cam02g1430 Cam-Chr2:27060686 Cam10g2033 Cam-Chr10:34166678 3.40E-223 transposed
Cam04g0827 Cam-Chr4:22533052 Cam10g2033 Cam-Chr10:34166678 2.00E-26 transposed
Cam10g2033 Cam-Chr10:34166678 Cam02g1428 Cam-Chr2:27045186 1.20E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g2033 - - - 0.0