Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g2036 ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCCAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAGCTGGGGAAGAAGCTAA 1194 44.89 MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGPPLVPYQSKEEKVSPHRQTPSWGRS 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34200090 34202882 - CaPI482276_10g020360.1 Cam10g2036 138699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g2036 397 PANTHER PROTEIN PHOSPHATASE 73 355 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam10g2036 397 Pfam Protein phosphatase 2C 110 357 IPR001932 -
Cam10g2036 397 ProSiteProfiles PPM-type phosphatase domain profile. 80 397 IPR001932 -
Cam10g2036 397 SUPERFAMILY PP2C-like 79 353 IPR036457 -
Cam10g2036 397 CDD PP2Cc 78 353 IPR001932 -
Cam10g2036 397 FunFam Phosphatase 2C family protein 69 374 - -
Cam10g2036 397 SMART PP2C_4 58 352 IPR001932 -
Cam10g2036 397 MobiDBLite consensus disorder prediction 362 397 - -
Cam10g2036 397 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169(InterPro)
Cam10g2036 397 MobiDBLite consensus disorder prediction 1 30 - -
Cam10g2036 397 Gene3D - 69 374 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0048 Cam-Chr10:2101953 Cam10g2036 Cam-Chr10:34200090 2.80E-127 dispersed
Cam10g0180 Cam-Chr10:3391304 Cam10g2036 Cam-Chr10:34200090 2.90E-22 dispersed
Cam10g1717 Cam-Chr10:31207299 Cam10g2036 Cam-Chr10:34200090 2.80E-106 dispersed
Cam10g2036 Cam-Chr10:34200090 Cam11g0846 Cam-Chr11:11170124 6.00E-21 dispersed
Cam10g2036 Cam-Chr10:34200090 Cam02g1427 Cam-Chr2:27038249 5.40E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g2036 K01102 - csv:101210750 649.047