Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g2036 | ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCCAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAGCTGGGGAAGAAGCTAA | 1194 | 44.89 | MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGPPLVPYQSKEEKVSPHRQTPSWGRS | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 34200090 | 34202882 | - | CaPI482276_10g020360.1 | Cam10g2036 | 138699 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g2036 | 397 | PANTHER | PROTEIN PHOSPHATASE | 73 | 355 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cam10g2036 | 397 | Pfam | Protein phosphatase 2C | 110 | 357 | IPR001932 | - | |
Cam10g2036 | 397 | ProSiteProfiles | PPM-type phosphatase domain profile. | 80 | 397 | IPR001932 | - | |
Cam10g2036 | 397 | SUPERFAMILY | PP2C-like | 79 | 353 | IPR036457 | - | |
Cam10g2036 | 397 | CDD | PP2Cc | 78 | 353 | IPR001932 | - | |
Cam10g2036 | 397 | FunFam | Phosphatase 2C family protein | 69 | 374 | - | - | |
Cam10g2036 | 397 | SMART | PP2C_4 | 58 | 352 | IPR001932 | - | |
Cam10g2036 | 397 | MobiDBLite | consensus disorder prediction | 362 | 397 | - | - | |
Cam10g2036 | 397 | ProSitePatterns | PPM-type phosphatase domain signature. | 114 | 122 | IPR000222 | GO:0043169(InterPro) | |
Cam10g2036 | 397 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cam10g2036 | 397 | Gene3D | - | 69 | 374 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam10g0048 | Cam-Chr10:2101953 | Cam10g2036 | Cam-Chr10:34200090 | 2.80E-127 | dispersed | |
Cam10g0180 | Cam-Chr10:3391304 | Cam10g2036 | Cam-Chr10:34200090 | 2.90E-22 | dispersed | |
Cam10g1717 | Cam-Chr10:31207299 | Cam10g2036 | Cam-Chr10:34200090 | 2.80E-106 | dispersed | |
Cam10g2036 | Cam-Chr10:34200090 | Cam11g0846 | Cam-Chr11:11170124 | 6.00E-21 | dispersed | |
Cam10g2036 | Cam-Chr10:34200090 | Cam02g1427 | Cam-Chr2:27038249 | 5.40E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g2036 | K01102 | - | csv:101210750 | 649.047 |