Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam10g2153 | ATGGAGGTCGAGAGAGAAGAAGAAGATGTGAGAGTGGGAGTGAATAGGTTCGAAGAAAGGCAGGCGATCGGGACGGCAGCTCGAAAGGACTACCGAGAGCCGCCCCCGGCGCCGCTGTTCGAGGGCGGAGAGTTAGGTTCATGGTCATTCTACAGGGCTGGGATTGCAGAGTTTGTAGGGAGTTTGTTGTTCCTTTATGTGAGTGTAATGACTGTAATGGGCGTGGCCAAAGCTCCAAATAAGTGTTCCACCGTTGGAGTCCAAGGCATTGCTTGGGCTTTTGGTGGAATCATCTTTGTTCTTGTCTATTGCACGGCTGGTATTTCAGGTGGCCACATAAACCCAGCAGTCACATTGGGGCTATTACTAGCAAGGAAGTTGTCGCTCACAAGGGCAGTTTATTACATTATAATGCAGTGCCTTGGCGCCATCTGCGGCGCCGCCGTTGTCAAAGCCTTCGAAAAAGGACCTTTCGAGCTGCTCGGCGGCGGCGCCAACACCGTTAATGAAGGCTACTCTAACACAGCTGCCCTCGGAGCTGAAATCGTCGGCACATTTCTGCTTGTTTACACCGTCTTTTCAGCCACCGATGCAAAGCGAAATGCTCGAGATTCCCACGTTCCCATGTTGGCTCCTCTGCCGATTGGGTTTGCGGTGTTTTTGGTGCATTTAGCCACCATTCCGATCACTGGAACCGGCATTAATCCGGCGAGAAGCCTCGGCGCCGCCATTATTTACAACCGTCACCAAGGCTGGCATGACCATTGGGTGTTTTGGGCAGGGCCGTTCATCGGGGCAGCACTTGCAGCTTTGTACCATCAGACGGTGATCAGGGCCATCCCATTTAAGTCCAAATGA | 858 | 52.68 | MEVEREEEDVRVGVNRFEERQAIGTAARKDYREPPPAPLFEGGELGSWSFYRAGIAEFVGSLLFLYVSVMTVMGVAKAPNKCSTVGVQGIAWAFGGIIFVLVYCTAGISGGHINPAVTLGLLLARKLSLTRAVYYIIMQCLGAICGAAVVKAFEKGPFELLGGGANTVNEGYSNTAALGAEIVGTFLLVYTVFSATDAKRNARDSHVPMLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRHQGWHDHWVFWAGPFIGAALAALYHQTVIRAIPFKSK | 285 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35051659 | 35054180 | - | CaPI482276_10g021530.1 | Cam10g2153 | 138816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam10g2153 | 285 | FunFam | Probable aquaporin PIP1-2 | 37 | 285 | - | - | |
Cam10g2153 | 285 | ProSitePatterns | MIP family signature. | 112 | 120 | IPR022357 | - | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 131 | 150 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 256 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 52 | 71 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 216 | 238 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 180 | 198 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PRINTS | Major intrinsic protein family signature | 94 | 118 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | Gene3D | Glycerol uptake facilitator protein. | 37 | 284 | IPR023271 | - | |
Cam10g2153 | 285 | NCBIfam | MIP family channel protein | 56 | 273 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | Pfam | Major intrinsic protein | 45 | 273 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam10g2153 | 285 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 284 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Cam10g2153 | 285 | SUPERFAMILY | Aquaporin-like | 47 | 278 | IPR023271 | - | |
Cam10g2153 | 285 | CDD | MIP | 52 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0406 | Cam-Chr7:5402798 | Cam10g2153 | Cam-Chr10:35051659 | 7.10E-128 | dispersed | |
Cam07g0407 | Cam-Chr7:5409974 | Cam10g2153 | Cam-Chr10:35051659 | 7.10E-128 | dispersed | |
Cam08g1194 | Cam-Chr8:18281454 | Cam10g2153 | Cam-Chr10:35051659 | 1.20E-100 | dispersed | |
Cam10g1998 | Cam-Chr10:33871730 | Cam10g2153 | Cam-Chr10:35051659 | 1.00E-94 | dispersed | |
Cam01g2459 | Cam-Chr1:36377652 | Cam10g2153 | Cam-Chr10:35051659 | 4.30E-18 | transposed | |
Cam05g0630 | Cam-Chr5:5475215 | Cam10g2153 | Cam-Chr10:35051659 | 1.40E-15 | transposed | |
Cam05g1262 | Cam-Chr5:12476705 | Cam10g2153 | Cam-Chr10:35051659 | 5.40E-18 | transposed | |
Cam10g2153 | Cam-Chr10:35051659 | Cam07g0405 | Cam-Chr7:5396100 | 2.90E-126 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam10g2153 | K09872 | - | vvi:100233000 | 476.092 |