Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam10g2191 | ATGGACATGGATACCGACGAAAATTCAAATGCCAAAGGAAAGGAAGGGCAAGGGAAGCTCATAATGGTAATATTAGTGGGCGCACCTGGAAGCGGCAAATCCACCTTCTGCGAGCTTGTAATGGGTTCCTCTTCTCGCCCTTGGGTTCGAATCTGTCAGGATACCATTGGAAATGGAAAGTCTGGAACCAAAGCCCAGTGCTTAAAGAGTGCAGCCAGTGCACTGAATAATGGAAAGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGCGCTGATTTTGTGAAGCTCGGTGGCCCTCAAGTAGATGTACATGCCGTTGTATTAGATCTTCCTGCACAGCTCTGTATCTCTCGTTCTGTGAAGCGGACTGGTCATGAAGGGAACTTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCCAAACTAAATGAAGGGTTCACTCGCATAACCTTTTGCCACAATGAGACCGATGTTCAATCCGCTATAGATATGTACAAATCGCTTGATTTACATAATTTGCTTCCACATGGATGTTTTGGACAGAAGAATCCAAACAAGAAAGTACAACTTGGCATAATGAAGTTCTTGAAGAAAGCAGAAAAACCTTCTGAGACGCGTTCTAGTGCCAATACTGTTAAGGATTCTCCAACTCCACAAACTACCCAGGAAAATAGCGACTCTTGTGATAAAAAGGAAGAGTCTGCCTGCACAATGTCGAAAAATGTAGATATAGAGGCAGAGAAAGGTGAATGTCCAGGCATTAGATCCTTAGAAGACAATATTTCTCAAAGCAATTCTCCAACTCTTGCATTTCCATCTATTTCAACTTCAGATTTCAAGTTTAGCCATGAAAAAGCTGCTGAAATTATTGTTGAGAAGGTTGAGGAATTCATGGATAAGCTTGGAAATGCCAAACTTGTACTGGTAGACTTGAGTCGTGGATCAAAGATCTTGTCTTTGGTTAAAGCTAAAGCAGCTAAGAAAAATATTAGTTCCACCAAGTTTCTTACATTTGTAGGTGATATAACTAAACTCAATTCAGAAGGTGGATTGCGCTGCAATGTGATAGCCAATGCTGCAAACTGGCGACTGAAACCAGGAGGGGGTGGTGTCAATGCTGCAATTTTTAGTGCTGCAGGGCCTGGTCTGGAAGTGGCAACTAAACAACAAGCAAACTCCCTTCAACCTGGCAATGCCGTGGCCGTTCCGTTGCCTTCAACTTCTCCTTTGTTCAATAGGGAAGGAGTAACCCATGTTATACATGTTCTTGGACCCAACATGAATCCACAGAGGCCAAATTATCTCAGCAATGACTATGATGAAGGCTGCAAACTTCTTCGCAATGCTTACTCTTCCTTATTTCAAGCCTTTATTTCAATTGTAGAAGACAAATTTAAGTCGGTTAAGGAAATTCACGAACACCTCGGCTCAGTACCTTCAGAACCACAAAAGCACTCTGAGGACAGCCATCACAAGTTTAAGAGAGAGAATTTGCAAAATCCTGAAAGAAGCAAAAAATGGAAAGGATCTCAAGACCCAACTGAAGCATTAAACCAAAACAACAATAAGACTGTCCCCAAAATGAGTAAGCACTGGGGTTCATGGGCACAAGCACTTTACAACACTGCAATGCATCCCGAGCAACATAGCGATACTGTACTGGAGACATCAGATGATGTTGTAATACTGAATGATATTTATCCAAAGGCACGCAAGCATCTTCTAGTAGTGGCTCGCCATGAAGGCCTCGATCAACTAACTGATGTATGTAGAGAACACCTTCCATTGTTGAGGACAATGCACGCTGTGGGTTTGAAGTGGATCGATAAGTTCTTTCATGAAGATGCATCATTAGTTTTTCGCCTTGGATACCACTCGGCTCCATCAATGAGGCAACTGCACCTACATGTTATAAGCCAGGATTTCGACTCCAGTCATCTGAAAAACAAGAAGCATTGGAATTCTTTCAACACCGATTTCTTCAGAGACTCGGTTGCCGTTATGGACGAAGTCAGTAGCCATGGAAAGGCGAGCATCATGGACGATGAGAGCTTGATGTCTATGGAGTTGCGTTGCAACAGATGCAGAAGTGCTCATCCCAACTTGCCCAAATTGAAAGCGCATAGTTTCAAATGCCAAGCGCCTTTCCCTTCCACACTACTTGAGGGCGGTCGTTTAGTGATTGCGCCAAGTAATGCTCCTCTTTCTTAG | 2244 | 43.09 | MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNNGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNETDVQSAIDMYKSLDLHNLLPHGCFGQKNPNKKVQLGIMKFLKKAEKPSETRSSANTVKDSPTPQTTQENSDSCDKKEESACTMSKNVDIEAEKGECPGIRSLEDNISQSNSPTLAFPSISTSDFKFSHEKAAEIIVEKVEEFMDKLGNAKLVLVDLSRGSKILSLVKAKAAKKNISSTKFLTFVGDITKLNSEGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPGLEVATKQQANSLQPGNAVAVPLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLSNDYDEGCKLLRNAYSSLFQAFISIVEDKFKSVKEIHEHLGSVPSEPQKHSEDSHHKFKRENLQNPERSKKWKGSQDPTEALNQNNNKTVPKMSKHWGSWAQALYNTAMHPEQHSDTVLETSDDVVILNDIYPKARKHLLVVARHEGLDQLTDVCREHLPLLRTMHAVGLKWIDKFFHEDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVAVMDEVSSHGKASIMDDESLMSMELRCNRCRSAHPNLPKLKAHSFKCQAPFPSTLLEGGRLVIAPSNAPLS | 747 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 35362756 | 35366161 | - | CaPI482276_10g021910.1 | Cam10g2191 | 138854 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam10g2191 | 747 | SMART | YBR022w_8 | 345 | 476 | IPR002589 | - | |
| Cam10g2191 | 747 | MobiDBLite | consensus disorder prediction | 522 | 536 | - | - | |
| Cam10g2191 | 747 | MobiDBLite | consensus disorder prediction | 216 | 235 | - | - | |
| Cam10g2191 | 747 | Gene3D | - | 3 | 179 | IPR027417 | - | |
| Cam10g2191 | 747 | FunFam | Transcription factor bHLH140 | 326 | 473 | - | - | |
| Cam10g2191 | 747 | SUPERFAMILY | Macro domain-like | 327 | 478 | IPR043472 | - | |
| Cam10g2191 | 747 | MobiDBLite | consensus disorder prediction | 486 | 536 | - | - | |
| Cam10g2191 | 747 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 551 | 663 | - | - | |
| Cam10g2191 | 747 | FunFam | aprataxin isoform X2 | 544 | 724 | - | - | |
| Cam10g2191 | 747 | ProSitePatterns | HIT domain signature. | 632 | 650 | IPR019808 | - | |
| Cam10g2191 | 747 | Gene3D | - | 545 | 725 | IPR036265 | - | |
| Cam10g2191 | 747 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 225 | 324 | IPR043472 | - | |
| Cam10g2191 | 747 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 668 | 719 | IPR032566 | - | |
| Cam10g2191 | 747 | PANTHER | APRATAXIN-RELATED | 84 | 743 | - | GO:0000012(PANTHER)|GO:0003697(PANTHER)|GO:0003725(PANTHER)|GO:0005634(PANTHER)|GO:0030983(PANTHER)|GO:0033699(PANTHER)|GO:1990165(PANTHER) | |
| Cam10g2191 | 747 | MobiDBLite | consensus disorder prediction | 210 | 243 | - | - | |
| Cam10g2191 | 747 | SUPERFAMILY | Macro domain-like | 274 | 315 | IPR043472 | - | |
| Cam10g2191 | 747 | Pfam | AAA domain | 22 | 149 | - | - | |
| Cam10g2191 | 747 | MobiDBLite | consensus disorder prediction | 486 | 521 | - | - | |
| Cam10g2191 | 747 | Pfam | Macro domain | 369 | 466 | IPR002589 | - | |
| Cam10g2191 | 747 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 325 | 480 | IPR043472 | - | |
| Cam10g2191 | 747 | ProSiteProfiles | HIT domain profile. | 550 | 658 | IPR011146 | GO:0003824(InterPro) | |
| Cam10g2191 | 747 | FunFam | Transcription factor bHLH140 | 8 | 178 | - | - | |
| Cam10g2191 | 747 | SUPERFAMILY | HIT-like | 533 | 707 | IPR036265 | - | |
| Cam10g2191 | 747 | ProSiteProfiles | Macro domain profile. | 333 | 586 | IPR002589 | - | |
| Cam10g2191 | 747 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 22 | 166 | IPR027417 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam10g2191 | K10863 | - | csv:101216867 | 1353.96 |