Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam10g2197 ATGACTATGGCAGCTCCTCTGGCTCTTCTTTCTGTGTTCCTCCTTTTGGCTGCCCATTCAGTGCAGTCTTCATTTCCCTACCATGGATTCAACGATACAGGACTTGATCTTGAGGGAGCTTTTGTTTTGAAGCCATCTGGTGCATTGAGGCTCACCAATAGATCGCATAATGTTATCGGCCACGCGTTCTATCCATCTTCATTCCAGATGTTTGATCAAAGTTCTGACTCATTTCCGAATGTTTCATCATTCAGCACAACTTTTGTTTTTGCAATTGATCCTTCGAGCCCCGGCCAAGGCGGGTACGGCTTGGCCTTTGCCATAGCTGCATCAACCCAATTTGCAGGTGCAGACAGTGGACACTTTCTTGGATTGTTCAACTCTTCCAACAATGGTGACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGATGAAGAAAGGAACACCAAAGGAAACCATATTGGAATCAACATCAATGGCATTTCATCAGTTGCATCCAAACCTGCTTCTTATTCCGACTATGGCGAAGCTCATGAACACGACTTGCAAATGGATTCTGGTGATCCTATCATCGTTTGGATTGAATATGATGGCCCCAACAGAATGGTGAACGTTACAATAGCTCCGTGGAAGCTTAAAAGAAAACCAACAAAGTCACTCCTTTCCCGTCGGATTGAACTGAAACCTGTTCTAAAGGAAAAAATGTTCGTCGGCTTCTCGGCTTCAACCGGAGATAAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAATGAATGGACCAGCGCCTCCCCTGAATTACTCTCTTCTTCCCAACCCACCAAAAGAGCAAGATTCTCTTTCTTCACCACCCAACTCCCACTTCAAGGTTTTTATAGCAGTTATATCTGTTGTAGCCATTCTAGGAATTCTTTTCTTAGCTTTCTGGTACAGAAAAACGTGGCAAACTGAGAGGCTTGAAGATTGGGAAAGAGACTGTCCTCACAGATTCCACTACAGAGACCTTTACACAGCAACAAAAGGATTTAAAAGTAGCGAGCTAATTGGAACTGGGGGATTTGGCTCAGTGTATAAAGGTCAGATACATTCAACTGGAATTGAAATTGCAGTGAAGAGGGTAAGAAGAAACTCAGGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGTCGATTAAGACACAAGAACTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAACGATCTACTCATAGTTTACGATTATATTCCAAATGGAAGCCTCTACTCTCTTCTATATCATCCAAAAAACAACTATATATTGAATTGGAAACAAAGATTCAACATCCTCAAAGGAATTGCAGCAGGACTATTATACCTTCACGAAGAGTGGGAGCAAGTAGTGATCCATCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATCCCCGATTGAGCGATTTCGGTCTAGCCAGGCAATACGACCACGACGAAGCATCACACACGACCGGCGTCGTCGGCACGATCGGCTACATAGCGCCGGAGTTGGTTCGTACAGGGAAGGCTTCGAAAAACACGGATGTGTTTGGATATGGAGTTCTGCTTCTGGAAGTGGCGTGTGGAAGAAAACCTCTGGAATCGGAACAGTTCATATTGGTGGATTGGGTGATGGAGCAGTATGAAAGCGGAAAAATTCTGAATGCGGCTGATCCGAAGTTGAATTCAGTTTATGAGGATGAGGAGATGGAGATGGTTCTGCAATTGGGGCTTCTTTGTACTCACCAGATAGCCGAAGCTCGGCCGACGATGAGACAGGTGACGAGAATCCTTCACGGCGACGATCAAATTCCGGCGGTGGACGGCTGGGCTTGTTCTAAAAGCTACTCAAAATTTAACTCGAGAATGACTGAAGTGATTTCAGCAACTTCTTACCGTTCGTCGTCCATTGGCGATATTTCTTCAAGTTCCATAGATGCAGGCCGATAA 2004 44.21 MTMAAPLALLSVFLLLAAHSVQSSFPYHGFNDTGLDLEGAFVLKPSGALRLTNRSHNVIGHAFYPSSFQMFDQSSDSFPNVSSFSTTFVFAIDPSSPGQGGYGLAFAIAASTQFAGADSGHFLGLFNSSNNGDTSNHIFAVEFDTVNGHDEERNTKGNHIGININGISSVASKPASYSDYGEAHEHDLQMDSGDPIIVWIEYDGPNRMVNVTIAPWKLKRKPTKSLLSRRIELKPVLKEKMFVGFSASTGDKTSSHYILGWSFAMNGPAPPLNYSLLPNPPKEQDSLSSPPNSHFKVFIAVISVVAILGILFLAFWYRKTWQTERLEDWERDCPHRFHYRDLYTATKGFKSSELIGTGGFGSVYKGQIHSTGIEIAVKRVRRNSGQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLYSLLYHPKNNYILNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNPRLSDFGLARQYDHDEASHTTGVVGTIGYIAPELVRTGKASKNTDVFGYGVLLLEVACGRKPLESEQFILVDWVMEQYESGKILNAADPKLNSVYEDEEMEMVLQLGLLCTHQIAEARPTMRQVTRILHGDDQIPAVDGWACSKSYSKFNSRMTEVISATSYRSSSIGDISSSSIDAGR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35392340 35394343 - CaPI482276_10g021970.1 Cam10g2197 138860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam10g2197 667 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2197 667 PANTHER - 35 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cam10g2197 667 FunFam L-type lectin-domain containing receptor kinase V.9 21 271 - -
Cam10g2197 667 FunFam L-type lectin-domain containing receptor kinase S.4 426 628 - -
Cam10g2197 667 CDD STKc_IRAK 355 616 - -
Cam10g2197 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam10g2197 667 CDD lectin_legume_LecRK_Arcelin_ConA 24 267 IPR001220 GO:0030246(InterPro)
Cam10g2197 667 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2197 667 FunFam serine/threonine-protein kinase PBS1-like 316 425 - -
Cam10g2197 667 Gene3D - 21 269 - -
Cam10g2197 667 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246(InterPro)
Cam10g2197 667 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Cam10g2197 667 SMART serkin_6 349 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam10g2197 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 282 IPR013320 -
Cam10g2197 667 SUPERFAMILY Protein kinase-like (PK-like) 333 621 IPR011009 -
Cam10g2197 667 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Cam10g2197 667 Gene3D Transferase(Phosphotransferase) domain 1 426 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g0122 Cam-Chr8:2144819 Cam10g2197 Cam-Chr10:35392340 2.90E-254 dispersed
Cam10g2096 Cam-Chr10:34632247 Cam10g2197 Cam-Chr10:35392340 2.50E-152 dispersed
Cam10g2197 Cam-Chr10:35392340 Cam07g1316 Cam-Chr7:27531992 3.30E-64 dispersed
Cam10g2197 Cam-Chr10:35392340 Cam10g2198 Cam-Chr10:35397210 7.70E-239 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85532 PF00069 Pkinase 2.00E-51 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam10g2197 - - - 0.0