Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0036 ATGGAAGATCAGAATAGTTTGAAATCACGGTGGCGTTTACGTTACTGTTATGCACATGGAGGAATAGCTGCCGGGGAAAGTCGTGGTTATCCAAGAATCGGTGAACATATGGAGCATGGAGATCGAATTGAAGAAGGTAGCTCCAGATTGCTGCGGGGCAATAGCGTTGCTGGGAGTAGTAATGATTACAGGTGGGTTGACGGTAGTGAAGTCGACTCCGAATCGCCTCCATGGTCGCTGTTTGAAGAAAGAGAGGGCGGGGAAGGATATGGATCTATCAGAAGGAGGTTAATTAAGAAGCCCAAGAGAGTTGATTCTTTTGATGTTGAAGCAATGGAGATTGCCGGTGCCAACTATCACCATTTAAAGGATGTTTCCCTTTGGCAAACTATTGCTATAGCATTTCAAACACTTGGTGTTGTGTACGGTGACATGGGTACAAGTCCATTATACGTCTTTGCTGATGTATTTAGCAAGGTGCATATTGAGGCAGATGTTGATGTCTTGGGGGCTCTTTCCTTAGTGATTTATACAATTGCTCTTATTCCTTTGGCAAAATATGTTTTCGTAGTGCTCAGAGCCAACGACAATGGGGAAGGAGGAACATTTGCATTGTATTCGCTTATCTGTAGGTATGCCAAAGTTAACATGCTGCCAAACCGTCAGCCAGCTGACGAACATATCTCAAGTTTTAAGCTTAAACTTCCCACTCCAGAGTTGGAAAGGGCCTTACATATCAAAGAGACTCTGGAGAAGAGATCATCCTTGAAAACTCTTATATTGCTGTTGGTTCTCATGGGCACTTCAATGATTATTGGGGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCTGTGAGTGGTCTGCAGGGACAAATAAAGTCATTTGATACAAATGCTGTGGTTATTGTTTCAATTATAATCCTTGTGGCCTTGTTCAGCATACAGAAATTTGGAACTGGGAAAGTAGGATTTATGTTTGCTCCTGTCCTTGCTTTGTGGTTTTTTAGTTTGGGATCTATTGGAATTTACAATGTAGTGAAGTATGATCCCACCGTTGTAAGAGCTCTCAATCCCACTTACATCTATTTATTCTTCAAGAAAAATTCAAAAAATGCATGGTCAGCTCTCGGTGGTTGTGTTTTGTGCGTAACAGGAGCTGAAGCCATGTTCGCCGATCTAGGCCATTTCACTGTGCCAGCCATACAGATTGCCTTCACATGTGTTGTTTTCCCCTGCCTTCTCTTGGCATATATGGGCCAGGCTGCGTACCTTTTGAAACATCCAGATTCTGCAGCAAGAATATTTTATGATTCTGTGCCAGCAAGTCTTTTTTGGCCGGTCTTTGTGACAGCAACACTTGCTGCTATGATTGCGAGCCAAGCAATGATTTCTGCAACCTTTTCTTGTGTCAAGCAATCTATGGCTCTTGGATGTTTTCCAAGAATGAAGATAGTTCACACCTCTAAGAGACGAATGGGTCAAATTTACATCCCTGTGATCAATTGGTTTTTGATGATAATGTGCATATTTGTCGTTGCAATATTTCGAAGGACTACAGACATCGCCAATGCTTATGGTATTGCTGAAGTTGGTGTGATGTTGGTGAGCACTGTCCTGGTGACTCTAGTAATGCTCCTAATCTGGCAGACAAATTTGTTTCTTGCGTTTTGTTTCCCACTTGTATTTGGGTCAGTGGAAGTTATCTACTTATCTGCAGTTCTATCAAAAATCAGAGAGGGTGGATGGTTGCCACTTGCTTTTGCTTCCGTCTTCCTCTCTGTGATGTACACATGGAACTATGGGAGTGTGTTGAAGTACCAAAGTGAGGTGAGAGACAAAATATCAACGGATTTCTTGCTTGAACTGGGTTCTACACTTGGAACTGTAAGAGTTCCAGGAATTGGTCTCCTGTACAATGAGCTTGTCCAAGGCATTCCTGCAATTTTTGGGCAATTTCTTCTTAGCCTTCCAGCCATCCACTCCACAATTGTGTTTGTGTGCATTAAATATGTTCCAATCCCCGTGGTTCCACAAGAGGAAAGGTTTTTGTTTAGGAGGGTTGGCCCAAAAGATTACCATATGTTCCGTTGCATAGCAAGATATGGTTACAAGGATGTGCGGAAGGAAGATCACCATGCGTTTGAGCAACTTTTGATGGAAAGCCTCGAGAAGTTCTTAAGAAAGGAGTCTCAAGATCTTGCCCTGGAGAGCAATCTGAATGAGTTGCAATTCGACAATATTTCAGAGAGGTCGCGGGATTCTCCATCTCGAGGTGCTACTGATGTGAATGAGGAGCTGAGAATTCCATTGATGGAACAGGAAAGAACTGTGGATTCGGAAGAAGGTTATGGGGTGCGGTTGCCATCCAGCATTATGGCATCAGATGACGACCCTAGTTTGGAGTATGAGCTATCAGCCCTTCGGGAAGCAATGGATTCAGGATTTACGTATCTATTGGCCCAAGGGGACGTTCGAGCAAAGAAAAACTCATTTTTTGTTAAGAAGCTTGTTATAAACTATTTCTATGCATTCCTAAGGAGGAACTGTAGGGGTGGTGCAGCAACAATGCGAGTTCCCCACATGAACATTATGCAAGTTGGGATGACTTACATGGTTTGA 2625 43.01 MEDQNSLKSRWRLRYCYAHGGIAAGESRGYPRIGEHMEHGDRIEEGSSRLLRGNSVAGSSNDYRWVDGSEVDSESPPWSLFEEREGGEGYGSIRRRLIKKPKRVDSFDVEAMEIAGANYHHLKDVSLWQTIAIAFQTLGVVYGDMGTSPLYVFADVFSKVHIEADVDVLGALSLVIYTIALIPLAKYVFVVLRANDNGEGGTFALYSLICRYAKVNMLPNRQPADEHISSFKLKLPTPELERALHIKETLEKRSSLKTLILLLVLMGTSMIIGDGILTPAISVMSAVSGLQGQIKSFDTNAVVIVSIIILVALFSIQKFGTGKVGFMFAPVLALWFFSLGSIGIYNVVKYDPTVVRALNPTYIYLFFKKNSKNAWSALGGCVLCVTGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAYLLKHPDSAARIFYDSVPASLFWPVFVTATLAAMIASQAMISATFSCVKQSMALGCFPRMKIVHTSKRRMGQIYIPVINWFLMIMCIFVVAIFRRTTDIANAYGIAEVGVMLVSTVLVTLVMLLIWQTNLFLAFCFPLVFGSVEVIYLSAVLSKIREGGWLPLAFASVFLSVMYTWNYGSVLKYQSEVRDKISTDFLLELGSTLGTVRVPGIGLLYNELVQGIPAIFGQFLLSLPAIHSTIVFVCIKYVPIPVVPQEERFLFRRVGPKDYHMFRCIARYGYKDVRKEDHHAFEQLLMESLEKFLRKESQDLALESNLNELQFDNISERSRDSPSRGATDVNEELRIPLMEQERTVDSEEGYGVRLPSSIMASDDDPSLEYELSALREAMDSGFTYLLAQGDVRAKKNSFFVKKLVINYFYAFLRRNCRGGAATMRVPHMNIMQVGMTYMV 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1954642 1960428 + CaPI482276_11g000360.1 Cam11g0036 138958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0036 874 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 115 874 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam11g0036 874 Pfam K+ potassium transporter integral membrane domain 134 621 IPR053951 -
Cam11g0036 874 NCBIfam potassium uptake protein 133 873 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam11g0036 874 Pfam K+ potassium transporter C-terminal domain 634 872 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0606 Cam-Chr9:5960230 Cam11g0036 Cam-Chr11:1954642 1.20E-184 dispersed
Cam09g1936 Cam-Chr9:34047979 Cam11g0036 Cam-Chr11:1954642 1.00E-189 dispersed
Cam10g0901 Cam-Chr10:20110996 Cam11g0036 Cam-Chr11:1954642 2.80E-143 dispersed
Cam10g0902 Cam-Chr10:20118633 Cam11g0036 Cam-Chr11:1954642 3.60E-93 dispersed
Cam10g1237 Cam-Chr10:25788990 Cam11g0036 Cam-Chr11:1954642 5.00E-189 dispersed
Cam11g0036 Cam-Chr11:1954642 Cam10g1043 Cam-Chr10:22892577 7.90E-191 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0036 K03549 - csv:101202804 1514.59