Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0045 ATGGAGGGAGGACAAGACGATGCCGGAAATGGGTTCACGGCGGCCACTGGATCAAATCATCCGAGACCCGAGGCGGCAGCTCCACCACCGGAAGGTGGTGGTCCGGTGGGTTCTTCAGCGGCGGCAGGAAAGAAGAAGAGGGGGAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGCGGCACTGTCGCCGAAGCCGATATCGGCGTCGGCACCGGCACCGGCGGCAGTTATTGATTTCTCGGCGGAGAAACGTGGAAAAGTGCGGCCGGCGACTTCCTTGACCAAAACCAAATATGAAGTGGAGAATTTAGGTGAATGGGTACCTTGTTCTGTTGGTGCTAATTTCACACCCCATATCATCACAGTAAGCACTGGCGAGGATGTTACGATGAAGGTTCTCTCATTTTCTCAACAAGGGCCTCGAGCAATCTGCATTCTCTCTGCTAACGGTGTGATTTCGAGCGTCACGCTCCGTCAACCCGACTCCTCTGGAGGAACATTAACATATGAGGGTCGTTTTGAGATATTGTCATTGTCGGGATCGTTCATGCCGAGCGACAACGCAGGAACAAAGAGCAGAATTGGTGGAATGAGTGTCTCCTTAGCAAGTCCAGATGGACGAGTTGTTGGTGGTGGAGTTGCCGGTTTGTTAGTAGCTGCAAGTCCAGTTCAAGTGGTTGTAGGAAGCTTTTTATCTGGAAACCAACATGAGCAAAAGTCGAAAAAATCAAAACCCGACGTTGTATTACCGGTTTCTGCTTTTCCAATCTCTAGTGTGGAACCAAAATCATACAAGACGACGACGACGACGACGACATCTTCGTTTCGTGCTGAAACATGGTCACCTTTAGTTCCAGATTTAAGAAGCCAGCCAACTGATATCAATGTATCATTAACAAGTGGCTAA 915 50.27 MEGGQDDAGNGFTAATGSNHPRPEAAAPPPEGGGPVGSSAAAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPATSLTKTKYEVENLGEWVPCSVGANFTPHIITVSTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNAGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKSKKSKPDVVLPVSAFPISSVEPKSYKTTTTTTTSSFRAETWSPLVPDLRSQPTDINVSLTSG 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2032285 2034941 - CaPI482276_11g000450.1 Cam11g0045 138967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0045 304 CDD DUF296 119 210 IPR005175 -
Cam11g0045 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 233 IPR005175 -
Cam11g0045 304 FunFam AT-hook motif nuclear-localized protein 1-like 120 250 - -
Cam11g0045 304 ProSiteProfiles PPC domain profile profile. 115 260 IPR005175 -
Cam11g0045 304 Gene3D - 120 251 - -
Cam11g0045 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 117 240 - -
Cam11g0045 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 16 267 IPR039605 GO:0003680(InterPro)
Cam11g0045 304 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0256 Cam-Chr5:2510548 Cam11g0045 Cam-Chr11:2032285 1.90E-76 dispersed
Cam05g0890 Cam-Chr5:8028536 Cam11g0045 Cam-Chr11:2032285 6.30E-65 dispersed
Cam09g1194 Cam-Chr9:13049685 Cam11g0045 Cam-Chr11:2032285 2.40E-32 dispersed
Cam11g0045 Cam-Chr11:2032285 Cam11g1917 Cam-Chr11:31605971 3.40E-48 dispersed
Cam11g0045 Cam-Chr11:2032285 Cam01g0355 Cam-Chr1:3974678 9.70E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0045 - - - 0.0