Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0058 ATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACACCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGTGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCGCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCAGTGGAACCTGATGGCCGTGGAACAGCGTCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGTAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGAAGAAGAAGAGCTCCTATCTGCGTTGCACATGAACATGAAGCAGGTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGATACATGAACGGGAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAGTTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAGAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATGATCAATCAGCTGGAAAAGAGTCTACTACGAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCCGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCATTGCTTCACCATGCGAGAAATGGCAATTGA 2208 45.06 MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAASAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICVAHEHEAGRKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRYMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDDQSAGKESTTSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2172420 2183851 + CaPI482276_11g000580.1 Cam11g0058 138980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0058 735 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Cam11g0058 735 PANTHER CELL DIVISION PROTEIN KINASE 157 442 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cam11g0058 735 MobiDBLite consensus disorder prediction 510 524 - -
Cam11g0058 735 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0058 735 MobiDBLite consensus disorder prediction 18 112 - -
Cam11g0058 735 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0058 735 MobiDBLite consensus disorder prediction 705 735 - -
Cam11g0058 735 FunFam probable serine/threonine-protein kinase At1g54610 145 240 - -
Cam11g0058 735 Coils Coil 686 706 - -
Cam11g0058 735 SMART serkin_6 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0058 735 MobiDBLite consensus disorder prediction 510 542 - -
Cam11g0058 735 MobiDBLite consensus disorder prediction 705 727 - -
Cam11g0058 735 Gene3D Transferase(Phosphotransferase) domain 1 241 481 - -
Cam11g0058 735 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524(InterPro)
Cam11g0058 735 SUPERFAMILY Protein kinase-like (PK-like) 152 449 IPR011009 -
Cam11g0058 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0058 735 FunFam probable serine/threonine-protein kinase At1g54610 241 481 - -
Cam11g0058 735 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0290 Cam-Chr4:10188569 Cam11g0058 Cam-Chr11:2172420 1.90E-47 dispersed
Cam05g1097 Cam-Chr5:10044173 Cam11g0058 Cam-Chr11:2172420 1.60E-194 dispersed
Cam08g0065 Cam-Chr8:1256711 Cam11g0058 Cam-Chr11:2172420 8.30E-193 dispersed
Cam08g0756 Cam-Chr8:7643073 Cam11g0058 Cam-Chr11:2172420 3.60E-118 dispersed
Cam10g1268 Cam-Chr10:26129379 Cam11g0058 Cam-Chr11:2172420 7.70E-96 dispersed
Cam11g0058 Cam-Chr11:2172420 Cam11g0480 Cam-Chr11:6326329 1.00E-146 dispersed
Cam11g0058 Cam-Chr11:2172420 Cam02g1691 Cam-Chr2:29917626 7.60E-163 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85541 PF00069 Pkinase 3.30E-68 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0058 - - - 0.0