Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0097 ATGTCTCGACTAGTTGTTGTTGCATTCACGTTGTTGCTTTTGGGTTTAGCATGCAATGCCCAACTTTCTTCTTCGTTTTACGACCAAACTTGTCCCTCTGCACTCACCACTATTAGAACAGTTATTAGGCAAGCGATCTCTCAAGAACGTCGTATGGCTGCGTCTATCATTCGTCTCCATTTCCATGATTGTTTTGTTCAGGGATGCGATGCATCGATATTGCTTGATGATACTCCCTCGATGATTGGCGAACAAAATGCAGCACCCAACATAAATTCTGCTAGGGGTTACGGAGTGATACACAAGGCCAAGACTGAAGTTGAGAAGATATGTCCTGGTGTGGTATCTTGTGCAGATATTCTTGCTATAGCTGCAAGAGATGCTTCTTTTACTGTTGGTGGTCCATCTTGGACGGTAAGACTTGGAAGAAGAGACTCTACCACTGCAAGCAAAGCTCTAGCAGAGAGTGAGCTTCCACGTTTCCAAGAAAGTCTTGATAGGCTAATTTCCATTTTTGCAAATAAAGGACTTAGTACGAGAGATATGGTTGCATTGTCAGGTTCTCATACTATAGGACAAGCTCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGATGCAGGATTTGCTAGCACACGCCGTAGAAATTGTCCAACATCAGGTGGAAATGGAAATTTGGCACCACTTGATTTGGTCACACCCAATTCTTTTGACAATAATTACTTCAAAAATCTTGTTCAAAGAAAGGGTTTGCTAGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAATATTGTTACAGAGTACAGTAGAGATCCAACTGCATTCAAATCTGACTTTGCAGCTGCAATGATTAAAATGGGAGACATTCAACCTCTCACTGGTTCAGAAGGACAGATAAGAAACATATGTGGTGTTGTTAACTAA 945 40.74 MSRLVVVAFTLLLLGLACNAQLSSSFYDQTCPSALTTIRTVIRQAISQERRMAASIIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNINSARGYGVIHKAKTEVEKICPGVVSCADILAIAARDASFTVGGPSWTVRLGRRDSTTASKALAESELPRFQESLDRLISIFANKGLSTRDMVALSGSHTIGQAQCFLFRNRIYNQSNIDAGFASTRRRNCPTSGGNGNLAPLDLVTPNSFDNNYFKNLVQRKGLLETDQVLFNGGSTDNIVTEYSRDPTAFKSDFAAAMIKMGDIQPLTGSEGQIRNICGVVN 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2630746 2631886 + CaPI482276_11g000970.1 Cam11g0097 139019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0097 314 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 FunFam Peroxidase 25 174 - -
Cam11g0097 314 FunFam Peroxidase 159 293 - -
Cam11g0097 314 PANTHER PEROXIDASE 72-RELATED 11 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 CDD secretory_peroxidase 21 313 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam11g0097 314 Gene3D Peroxidase, domain 2 159 293 - -
Cam11g0097 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0097 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cam11g0097 314 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601(InterPro)
Cam11g0097 314 Gene3D - 26 310 - -
Cam11g0097 314 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Cam11g0097 314 Pfam Peroxidase 38 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1747 Cam-Chr7:32169868 Cam11g0097 Cam-Chr11:2630746 6.40E-72 dispersed
Cam11g0064 Cam-Chr11:2228413 Cam11g0097 Cam-Chr11:2630746 4.20E-158 dispersed
Cam11g0097 Cam-Chr11:2630746 Cam11g0604 Cam-Chr11:7585411 3.10E-105 dispersed
Cam11g0097 Cam-Chr11:2630746 Cam11g0098 Cam-Chr11:2635283 8.90E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0097 K00430 - csv:116403992 569.311