Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0135 ATGGGGGACGAGGAGCATAATGGGAATGGGAGTAGCCGGTTGGCGCCGCCGCGGGGTCCAGCGGAGCACTGTGTGGAAATTGTTCATCCGGTGGTTCCGCCGCCGAGGAGAAGCTGGATACAGAAGCTGCGCAACCGGCTGAAGGAAATATTTTTTCCGGACGATCCTCTCCGGCAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATTGGAGGTCAATATATATTCCCAATTCTTCAATGGGGGCCTCACTATAATCTTAGCCTTTTTAAATCTGATGTTGTTGCTGGTCTCACCATTGCTAGCTTGGCCATACCTCAGGGTATTAGCTATGCTAAGCTTGCCAATTTGCCTCCCATTGTTGGACTTTATTCAAGCTTTGTTCCACCACTAGTATATGCTGTTCTTGGAAGCTCAAGAGATCTAGCAGTTGGACCTGTTTCAATAGCATCACTAATATTGGGTTCTATGCTGAGGCAACAAGTTTCTCCCATCAAAGATCCCATTCTTTTTCTTCAGCTCGGCTTCACTTCTACCTTCTTCGCGGGTCTCTTCCAAGCTTCGCTCGGGTTTCTCAGACTTGGTTTTATAATAGATTTTTTATCGAAGGCGACTTTGATTGGATTCATGGCAGGAGCAGCCATTATTGTGTCTTTGCAACAACTTAAAGGGTTGCTTGGAATAACCCATTTCACTAAACAGATGGGTTTGATTCCTGTTTTGTCCTCAGTTTTTCATCACACTCATGAGTGGTCATGGCAGACTATACTGATGGGCTTTTGTTTCCTTCTCTTTCTTCTCCTCACAAGGCACATTAGCATGAAAAAGCCAAAATTGTTCTGGGTGTCAGCTGGAGCTCCTTTGGTGTCCGTCGTTCTTTCAACCATTTTGGTCTTTGCATTCAAGGCGGATCGCCATGGCATCACTGTTATAGGAAAGTTGCAAGAAGGATTGAACCCACCTTCATGGAACATGCTTCGATTTGAAGGGTCACACCTTGGCCTTGTTATTAAGACTGGACTAGTCACCGGCATCATCTCTCTCACTGAAGGAATCGCAGTAGGGCGAACTTTTGCAGCTATAAAAGACTACCGCGTCGATGGTAACAAGGAAATGATTGCAATCGGCCTCATGAATGTCGTCGGCTCTTTCACTTCTTGCTATATCACAACAGGTGCATTTTCAAGGTCAGCGGTGAACCATAATGCGGGAGCAAAGACCGCAGTGTCAAACATCATAATGTCAGTGACGATAATGGTGACGTTGTTGTTTCTGATGCCTCTGTTTCAGTATACACCCAATCTGGTGTTGGCTGCGATCATCGTCACCGCCGTCGTCGGCCTTATCGACATCCCGGCTGCCTATGGCATTTGGAAGGTCGACAAGTTCGATTTCGTTGTGATGCTTTGTGCCTTCTTCGGCGTCATTCTCATCTCTGTTCAACATGGCCTCGCCATTGCTGTTGGCATATCAATTTTCAAGATCATCCTACAAATCACAAGGCCAAAAACAGTGATGTTGGGGAACATAGCTGGAACAGATATATATAGAAACCTTCACCATTACAAGGATGCAATGAGTGTCAAAGGCTTTCTCATTTTAAGCATTGAAGCTCCAATCAACTTTGCCAACACCACATATCTCAATGAAAGGATTTTGAGATGGATCGAAGATTATGAAGCTGATCAAGATCATATTAAGAAGGAGGACTCCAGCCTTCAGTTTGTTGTTTTAGAATTGTCAGCTGTGAGTGCTATAGACACTAGTGGAGTTTTACTCTTCAAAGACCTAAGGAGAGCATTGGAAAAGAAGGGTGTTGAGCTAGTGTTGGTGAACCCATTGGGTGAAGTTTTGGAAAAGTTGCAAAAGGCAGATGAAAATCAAGAGATTTTGAGGCCAAATAATGTATTCTTGACTGTGGGAGAGGCCATTGCTTCACTAGCAACAACAATGAAGGGACAATCCTCAACTATATAG 1980 44.95 MGDEEHNGNGSSRLAPPRGPAEHCVEIVHPVVPPPRRSWIQKLRNRLKEIFFPDDPLRQFKGQSPARKWVIGGQYIFPILQWGPHYNLSLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPIKDPILFLQLGFTSTFFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLIPVLSSVFHHTHEWSWQTILMGFCFLLFLLLTRHISMKKPKLFWVSAGAPLVSVVLSTILVFAFKADRHGITVIGKLQEGLNPPSWNMLRFEGSHLGLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYITTGAFSRSAVNHNAGAKTAVSNIIMSVTIMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDIPAAYGIWKVDKFDFVVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIAGTDIYRNLHHYKDAMSVKGFLILSIEAPINFANTTYLNERILRWIEDYEADQDHIKKEDSSLQFVVLELSAVSAIDTSGVLLFKDLRRALEKKGVELVLVNPLGEVLEKLQKADENQEILRPNNVFLTVGEAIASLATTMKGQSSTI 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2973139 2984451 - CaPI482276_11g001350.1 Cam11g0135 139057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0135 659 CDD STAS_SulP_like_sulfate_transporter 523 641 - -
Cam11g0135 659 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cam11g0135 659 NCBIfam sulfate permease 78 643 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam11g0135 659 ProSiteProfiles STAS domain profile. 522 648 IPR002645 -
Cam11g0135 659 FunFam Sulfate transporter 31 502 651 - -
Cam11g0135 659 Pfam Sulfate permease family 91 471 IPR011547 GO:0016020(InterPro)
Cam11g0135 659 PANTHER SULFATE TRANSPORTER 52 646 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam11g0135 659 SUPERFAMILY SpoIIaa-like 528 648 IPR036513 -
Cam11g0135 659 Pfam STAS domain 526 644 IPR002645 -
Cam11g0135 659 Gene3D STAS domain 502 651 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0218 Cam-Chr9:2819041 Cam11g0135 Cam-Chr11:2973139 1.70E-230 dispersed
Cam09g1672 Cam-Chr9:29024442 Cam11g0135 Cam-Chr11:2973139 1.80E-176 dispersed
Cam09g2060 Cam-Chr9:35175933 Cam11g0135 Cam-Chr11:2973139 6.90E-92 dispersed
Cam11g0135 Cam-Chr11:2973139 Cam11g1556 Cam-Chr11:28362295 3.10E-187 dispersed
Cam11g0135 Cam-Chr11:2973139 Cam09g0713 Cam-Chr9:7098159 2.40E-208 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0135 K17471 - csv:101219163 1186.02