Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0153 ATGGCGGTGAAGAAAATGAAGTGGAGATCCATTTTCTCCAGCTGCTGCGAGGTTGATTCGCAGTCGTCGGAGGTGATGAAAGTAGTGGCGGCGAATAAGCCGAGTTCCTTCCAAAGGATTTCGAAACTGGATTTGAGTAACCCTAATTCCACTCTCTCTGAAGATCTTTCCATTTCTCTCGCCGGATCTGACATCCACGCTTTCACTCTCGCCGAATTGAAGCTCATCTCTCAGACCTTTTCTTCCTCAAACTTCCTTGGAGAAGGTGGATTCGGCCCCGTCTACAAAGGATTCCTCGATGACAATCTCAGGCCTGGCTTGTCTCCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGAACACAAGGCCACAGAGAATGGCTGACGGAGGTGATTTTTCTAGGACAGCTTAAGCACGCTCATCTAGTGAAGCTAATTGGATATTGCTGCGAAGACGAACATAGGATGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCGATCCCATTGCCATGGTCGACGAGAATGAAGATTGCTCTTGGAGCTGCCAAGGGTCTGGCCTTCCTCCACGAAGCAGATAAACCAGTCATTTACCGAGATTTCAAAGCCTCCAACATACTGCTCGACTCTGATTATACCGCGAAGCTGTCTGATTTTGGACTAGCCAAAGACGGTCCAGAAGGAGACAACACGCATGTCTCGACCCGAGTAATGGGGACGCATGGATATGCTGCGCCGGAGTATATAATGACGGGTCATTTGACGGCAATGAGTGACGTGTATAGCTTCGGAGTAGTGCTTTTGGAGTTGTTGACAGGGCGGCGGTCGGTGGAGAAGAGCAGCCGTAAGAGGCAACAGAACTTGGCAGAGTGGGCGAGGCCGATGCTGAATGATCCAAGGAAGCTAAGCCGTATAATAGACCCAAGACTTGAAGGCCAATACTCGGAAATGGGAGCTCAGAAAGCAGCCACATTGGCTTACCAATGCTTGAGCCACCGCCCAAAGCAGAGGCCCACCATGAGCGCCGTCGTCAAGGTATTAGAGCCGCTTAAGGATTTCGATGACATTTCTTCAGGCACCTTCGTTTATACGGTTCTCGCCCAAAACGATCTTCACAACAAACCAACGGGAAATTCAACTTTAGAAGAAGCTAAAAAGTAA 1191 48.7 MAVKKMKWRSIFSSCCEVDSQSSEVMKVVAANKPSSFQRISKLDLSNPNSTLSEDLSISLAGSDIHAFTLAELKLISQTFSSSNFLGEGGFGPVYKGFLDDNLRPGLSPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRMLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAATLAYQCLSHRPKQRPTMSAVVKVLEPLKDFDDISSGTFVYTVLAQNDLHNKPTGNSTLEEAKK 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3177617 3179395 - CaPI482276_11g001530.1 Cam11g0153 139075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0153 396 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0153 396 SUPERFAMILY Protein kinase-like (PK-like) 56 358 IPR011009 -
Cam11g0153 396 PANTHER OS01G0588500 PROTEIN-RELATED 55 361 IPR050823 -
Cam11g0153 396 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Cam11g0153 396 FunFam Probable serine/threonine-protein kinase PBL8 163 375 - -
Cam11g0153 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0153 396 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Cam11g0153 396 CDD STKc_IRAK 86 360 - -
Cam11g0153 396 Gene3D Phosphorylase Kinase; domain 1 44 162 - -
Cam11g0153 396 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g0153 Cam-Chr11:3177617 Cam11g1148 Cam-Chr11:22539145 1.60E-111 dispersed
Cam03g1483 Cam-Chr3:29749884 Cam11g0153 Cam-Chr11:3177617 2.70E-119 transposed
Cam05g1744 Cam-Chr5:26086969 Cam11g0153 Cam-Chr11:3177617 4.60E-126 transposed
Cam07g1431 Cam-Chr7:28876270 Cam11g0153 Cam-Chr11:3177617 4.20E-126 transposed
Cam10g2255 Cam-Chr10:35737542 Cam11g0153 Cam-Chr11:3177617 1.70E-78 transposed
Cam11g0153 Cam-Chr11:3177617 Cam03g1526 Cam-Chr3:30206806 2.50E-168 wgd
Cam11g0153 Cam-Chr11:3177617 Cam09g0101 Cam-Chr9:1808751 2.30E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85544 PF07714 PK_Tyr_Ser-Thr 9.90E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0153 - - - 0.0