Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0157 ATGGATAAGAACGAAGAGACGGGGAGCCCTGGTTGGGGTACTTCACTTTTCCTACAAACCACTGAAGATGTTGCAAGAGCTGTGGCTGCTGCAGCTGCTGCTGCAACCGATGCTCGCTCTCCTCGTCCTTCTGTTATATACTCTTCAAAAGACGATGAGGGTGGCAGTCCACTTCAGAGACTGCAGCGTCAAGTTAATAAAGTGCTTAAAGGATTCTCTAGTCCTCCTCAAGTAAAAACTGCAGGAACCTACAATCCTGAAGTTCTCACTACCCAAAAGCGTCAGTGGGCGAATTTCCAGTTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCAACTAGGATTTTTGAGAGTATGGTTGTTGTTGGCCTTCATCCTAATTGTGATATTCAGGCACTTCAGAGGCAGTATGCTGCAAAGAAGTCAGAAGGTTCTGGGAGATTGCGAACTGCTCTTAATAATAGTCAGAGTCAATCTCGGGTAGAACCTCATCTTGAACCACAGGTCCTATTTGTTTACCCTCCAGAGAAACAGTTACCGCTCAAGTACAAGGACCTTCTTTCATTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTTGAAAAAACTCCTTCCATGAGTGAGTTGAACGAGATTCTTCTTGGGCAGGAACACTTTAAGCAAAGTGATCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTACGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGTTTCTGAAAAAGCATCTTCTTACTCATCCTTGAGCCGTTACATACTAACCACACGCAGATGCTACTGTATCCTAACTCGGTTGCCATTCTTCGAATTACATTTCGGTGTGTTGAATAGCATCTTCACCGAAGAAAGGCTTCAAAGATTAACAAAAGGTATTGGTGTTTTGAATATGGAATCCACAGAGAATTTGAGCAATGAAGAAGATTTGGTGGAAGACATAGGTTGCATGTCTTTAGATCAGAGTGTAGCTGAAGATGTTCATGAGGGAAAAGAGGAATATTTTCAAAGAATGGGTGATGAAAATCAAGTTGAGCATCAAATGCTCGATGAAAATTATCAATGTCTGAAAAAGGGCATTAGTGATGATACAGTTGCCACACTTGATCCAGAACCAGAGGTAGTTACAGCCAAAATAGAATCTATTACTGTACATAAGGAAAATCATGATATCGATGTTGATGATTTTACAAGAAACAAGCAAGCAGTTGATAGACGTTTTCCGAATGCTGTTCTACCTCTCCTTCGCTATTATCAATATGAAAGCTCTGAATCGTCCTCGAGTTTTCAGGGGTCTCCAAGTGAAGACAGAAATTTCAGAAGTGATGCTGATGACACAGAGACAGAGGAGGCATCTTTCTCTGGCCAGGATGATTCCGCGGACCTACTTGACATTCTTGAATGGGCCAAGGAAAATAAGAATGGATCATTACAAATCATATGCGAGTATTACCAGTTGCATTACCCTGCGAGGGGCTGTTCTGTTAAGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAGTATTATAGATCGGGCAAAACAGTTCTACATGTTGCTGGCTCAACCATTGATCCAAGATCATGCAGTACAAGTCTTGAATTAGCAGAGGCACAAGGTGCTCTCATGGTAGAGGAGGAAGCAAATGCCTTGTCAATATGGACTGTTGCAAGCATTTGTGGTTCTTTACGCCTTGAGCATATTTTATCAATTTTAGCTGGAGCGCTGCTGGAGAAGCAGATTGTGATTGTTTGTTCCAATCTGGGTATCCTGTCAGCTTCAGTTTTATCAATGATCCCTATGATTCGTCCCTACCAGTGGCAAAGTTTGCTGATGCCAGTGTTACCAAATGACATGCTGGACTTTTTGGATGCTCCTGTTCCTTACATAGTTGGTGTGAAAAATAAAACCAGTGAAGTACAATCAAAGTTAACCAATGCCGTTTTGGTTGATGTGAACAAAAACCAGGTCAAGGCCCCAACAATACCTCAGTTGCCAAAACAAAAGGAGTTATTCTCATCATTAAGACCGTATCATGCGGAGCTAGTTGGAGAGAGTTTTTTAGGGAGAAAGAGGCCAGTGCATGAATGCACTGATGTGCAGGTTGAAGCTGCCAAGGGTTTCCTAAAAGTGCTTAGATTATACTTGGACTCTCTCTGCTCTAACCTTCGTTCACATACAATTACTAATGTACAATCAAATGATGATAAGGTATCATTACTCTTGAAGGAGAGCTTCATCGAGTCGTTCCCAAGCCGTGATCGGCCATTTTTGAAGAGATGTCAGAGACAAAGGGCTGGCAGACAGAAGCAGAAGAGGCAGAGAGTTGCAGTCATAATATTAGCAAAGAGAAAGAAAGGAGTAACTCAATGGCAAGAGCTGGAACATCAAGCTTTGATCTTTAAGTACATGGTCTCCGGCATTCCTGTCCCTCCTGATCTGCTTTTCACCATTAAAAGAACTTCTTTGTCTTTGGATACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGATGTTGGATGGAACTATGTGCAAATGGGTTCAGGGAGGAAAATTGATCCGGAGCCTGGAAGATGTAGAAGAACAGATGGGAAAAAATGGAGATGCTCCAAAGAAGCATACCCAGATTCTAAATATTGTGAAAGACATATGCATAGAGGTAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAATAACAACTGCTTTAAACTCTAATCCATCATCATCATCATCACTTACCCATAACTCCACTCATTCCTTTGCTTCACTCACCAACTCTGAAACACATCCCCATCCCCATCCTTTTCTCTATCAACATGCTTCTGCTTCTTCTGCTCATTCATCCTTACTTCCAGATTACAGAAGAAACAGGTATGTTTATGGGGGGAAGGAAGAAGATGTTGATGAACAACCCTTTGTGAGGGAAGAACAACATTCAGGGAACATGAGAGGCTTCTCTGCTTCATCCATGGAAGATTCTTGGCAGCTAACTCCTTTGACAATGAGTAGCTCTTCCTCATCTTCCAGATACAAGAATGGTTCTGCTTTAGAAGGTGATTACTCTTCTTACTTGCAGCTACAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGAAAGAGAGGAACCACAGAAGATTATGCATCATTTTTTTGATGAATGGTCTGCTAAAGACAGAGAATCTTGGGTTGATTTGGATGATAAGTCATCCAACAATACTGGCGCAGTTTCTGCAACTAGGCTTTCAATGTCTATTCCTAACCATGACTTCTCCTCTATCTTCACTTCCAATAAGCATAATGAAAACTAA 3384 41.99 MDKNEETGSPGWGTSLFLQTTEDVARAVAAAAAAATDARSPRPSVIYSSKDDEGGSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYAAKKSEGSGRLRTALNNSQSQSRVEPHLEPQVLFVYPPEKQLPLKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSVSEKASSYSSLSRYILTTRRCYCILTRLPFFELHFGVLNSIFTEERLQRLTKGIGVLNMESTENLSNEEDLVEDIGCMSLDQSVAEDVHEGKEEYFQRMGDENQVEHQMLDENYQCLKKGISDDTVATLDPEPEVVTAKIESITVHKENHDIDVDDFTRNKQAVDRRFPNAVLPLLRYYQYESSESSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSADLLDILEWAKENKNGSLQIICEYYQLHYPARGCSVKFHPLEHLHPLEYYRSGKTVLHVAGSTIDPRSCSTSLELAEAQGALMVEEEANALSIWTVASICGSLRLEHILSILAGALLEKQIVIVCSNLGILSASVLSMIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAVLVDVNKNQVKAPTIPQLPKQKELFSSLRPYHAELVGESFLGRKRPVHECTDVQVEAAKGFLKVLRLYLDSLCSNLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKRCQRQRAGRQKQKRQRVAVIILAKRKKGVTQWQELEHQALIFKYMVSGIPVPPDLLFTIKRTSLSLDTPFISRLFPHQYPDVGWNYVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTITTALNSNPSSSSSLTHNSTHSFASLTNSETHPHPHPFLYQHASASSAHSSLLPDYRRNRYVYGGKEEDVDEQPFVREEQHSGNMRGFSASSMEDSWQLTPLTMSSSSSSSRYKNGSALEGDYSSYLQLQSFGKYNEMQSKMEREEPQKIMHHFFDEWSAKDRESWVDLDDKSSNNTGAVSATRLSMSIPNHDFSSIFTSNKHNEN 1127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3196545 3205716 + CaPI482276_11g001570.1 Cam11g0157 139079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0157 1127 Pfam DENN (AEX-3) domain 572 671 IPR001194 -
Cam11g0157 1127 ProSiteProfiles Tripartite DENN domain profile. 149 810 IPR037516 -
Cam11g0157 1127 SMART DENN_cls 274 672 IPR001194 -
Cam11g0157 1127 Gene3D - 569 765 IPR043153 -
Cam11g0157 1127 Gene3D - 104 311 - -
Cam11g0157 1127 SMART QLQ_2 806 837 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cam11g0157 1127 MobiDBLite consensus disorder prediction 923 955 - -
Cam11g0157 1127 Pfam QLQ 806 835 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cam11g0157 1127 MobiDBLite consensus disorder prediction 923 960 - -
Cam11g0157 1127 Pfam uDENN domain 167 244 IPR005113 -
Cam11g0157 1127 ProSiteProfiles WRC domain profile. 872 916 IPR014977 -
Cam11g0157 1127 ProSiteProfiles QLQ domain profile. 802 837 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Cam11g0157 1127 Pfam WRC 873 915 IPR014977 -
Cam11g0157 1127 MobiDBLite consensus disorder prediction 33 57 - -
Cam11g0157 1127 MobiDBLite consensus disorder prediction 442 473 - -
Cam11g0157 1127 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 40 778 IPR051942 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1156 Cam-Chr7:25927467 Cam11g0157 Cam-Chr11:3196545 1.20E-48 dispersed
Cam08g2143 Cam-Chr8:26813217 Cam11g0157 Cam-Chr11:3196545 4.40E-29 dispersed
Cam10g1886 Cam-Chr10:32929029 Cam11g0157 Cam-Chr11:3196545 5.40E-28 dispersed
Cam06g0090 Cam-Chr6:2766612 Cam11g0157 Cam-Chr11:3196545 8.80E-140 transposed
Cam11g0157 Cam-Chr11:3196545 Cam03g1536 Cam-Chr3:30309457 2.30E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52850 PF02141 DENN 4.50E-23 CL0330 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0157 - - - 0.0