Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0157 | ATGGATAAGAACGAAGAGACGGGGAGCCCTGGTTGGGGTACTTCACTTTTCCTACAAACCACTGAAGATGTTGCAAGAGCTGTGGCTGCTGCAGCTGCTGCTGCAACCGATGCTCGCTCTCCTCGTCCTTCTGTTATATACTCTTCAAAAGACGATGAGGGTGGCAGTCCACTTCAGAGACTGCAGCGTCAAGTTAATAAAGTGCTTAAAGGATTCTCTAGTCCTCCTCAAGTAAAAACTGCAGGAACCTACAATCCTGAAGTTCTCACTACCCAAAAGCGTCAGTGGGCGAATTTCCAGTTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCAACTAGGATTTTTGAGAGTATGGTTGTTGTTGGCCTTCATCCTAATTGTGATATTCAGGCACTTCAGAGGCAGTATGCTGCAAAGAAGTCAGAAGGTTCTGGGAGATTGCGAACTGCTCTTAATAATAGTCAGAGTCAATCTCGGGTAGAACCTCATCTTGAACCACAGGTCCTATTTGTTTACCCTCCAGAGAAACAGTTACCGCTCAAGTACAAGGACCTTCTTTCATTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTTGAAAAAACTCCTTCCATGAGTGAGTTGAACGAGATTCTTCTTGGGCAGGAACACTTTAAGCAAAGTGATCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTACGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGTTTCTGAAAAAGCATCTTCTTACTCATCCTTGAGCCGTTACATACTAACCACACGCAGATGCTACTGTATCCTAACTCGGTTGCCATTCTTCGAATTACATTTCGGTGTGTTGAATAGCATCTTCACCGAAGAAAGGCTTCAAAGATTAACAAAAGGTATTGGTGTTTTGAATATGGAATCCACAGAGAATTTGAGCAATGAAGAAGATTTGGTGGAAGACATAGGTTGCATGTCTTTAGATCAGAGTGTAGCTGAAGATGTTCATGAGGGAAAAGAGGAATATTTTCAAAGAATGGGTGATGAAAATCAAGTTGAGCATCAAATGCTCGATGAAAATTATCAATGTCTGAAAAAGGGCATTAGTGATGATACAGTTGCCACACTTGATCCAGAACCAGAGGTAGTTACAGCCAAAATAGAATCTATTACTGTACATAAGGAAAATCATGATATCGATGTTGATGATTTTACAAGAAACAAGCAAGCAGTTGATAGACGTTTTCCGAATGCTGTTCTACCTCTCCTTCGCTATTATCAATATGAAAGCTCTGAATCGTCCTCGAGTTTTCAGGGGTCTCCAAGTGAAGACAGAAATTTCAGAAGTGATGCTGATGACACAGAGACAGAGGAGGCATCTTTCTCTGGCCAGGATGATTCCGCGGACCTACTTGACATTCTTGAATGGGCCAAGGAAAATAAGAATGGATCATTACAAATCATATGCGAGTATTACCAGTTGCATTACCCTGCGAGGGGCTGTTCTGTTAAGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAGTATTATAGATCGGGCAAAACAGTTCTACATGTTGCTGGCTCAACCATTGATCCAAGATCATGCAGTACAAGTCTTGAATTAGCAGAGGCACAAGGTGCTCTCATGGTAGAGGAGGAAGCAAATGCCTTGTCAATATGGACTGTTGCAAGCATTTGTGGTTCTTTACGCCTTGAGCATATTTTATCAATTTTAGCTGGAGCGCTGCTGGAGAAGCAGATTGTGATTGTTTGTTCCAATCTGGGTATCCTGTCAGCTTCAGTTTTATCAATGATCCCTATGATTCGTCCCTACCAGTGGCAAAGTTTGCTGATGCCAGTGTTACCAAATGACATGCTGGACTTTTTGGATGCTCCTGTTCCTTACATAGTTGGTGTGAAAAATAAAACCAGTGAAGTACAATCAAAGTTAACCAATGCCGTTTTGGTTGATGTGAACAAAAACCAGGTCAAGGCCCCAACAATACCTCAGTTGCCAAAACAAAAGGAGTTATTCTCATCATTAAGACCGTATCATGCGGAGCTAGTTGGAGAGAGTTTTTTAGGGAGAAAGAGGCCAGTGCATGAATGCACTGATGTGCAGGTTGAAGCTGCCAAGGGTTTCCTAAAAGTGCTTAGATTATACTTGGACTCTCTCTGCTCTAACCTTCGTTCACATACAATTACTAATGTACAATCAAATGATGATAAGGTATCATTACTCTTGAAGGAGAGCTTCATCGAGTCGTTCCCAAGCCGTGATCGGCCATTTTTGAAGAGATGTCAGAGACAAAGGGCTGGCAGACAGAAGCAGAAGAGGCAGAGAGTTGCAGTCATAATATTAGCAAAGAGAAAGAAAGGAGTAACTCAATGGCAAGAGCTGGAACATCAAGCTTTGATCTTTAAGTACATGGTCTCCGGCATTCCTGTCCCTCCTGATCTGCTTTTCACCATTAAAAGAACTTCTTTGTCTTTGGATACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGATGTTGGATGGAACTATGTGCAAATGGGTTCAGGGAGGAAAATTGATCCGGAGCCTGGAAGATGTAGAAGAACAGATGGGAAAAAATGGAGATGCTCCAAAGAAGCATACCCAGATTCTAAATATTGTGAAAGACATATGCATAGAGGTAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAATAACAACTGCTTTAAACTCTAATCCATCATCATCATCATCACTTACCCATAACTCCACTCATTCCTTTGCTTCACTCACCAACTCTGAAACACATCCCCATCCCCATCCTTTTCTCTATCAACATGCTTCTGCTTCTTCTGCTCATTCATCCTTACTTCCAGATTACAGAAGAAACAGGTATGTTTATGGGGGGAAGGAAGAAGATGTTGATGAACAACCCTTTGTGAGGGAAGAACAACATTCAGGGAACATGAGAGGCTTCTCTGCTTCATCCATGGAAGATTCTTGGCAGCTAACTCCTTTGACAATGAGTAGCTCTTCCTCATCTTCCAGATACAAGAATGGTTCTGCTTTAGAAGGTGATTACTCTTCTTACTTGCAGCTACAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGAAAGAGAGGAACCACAGAAGATTATGCATCATTTTTTTGATGAATGGTCTGCTAAAGACAGAGAATCTTGGGTTGATTTGGATGATAAGTCATCCAACAATACTGGCGCAGTTTCTGCAACTAGGCTTTCAATGTCTATTCCTAACCATGACTTCTCCTCTATCTTCACTTCCAATAAGCATAATGAAAACTAA | 3384 | 41.99 | MDKNEETGSPGWGTSLFLQTTEDVARAVAAAAAAATDARSPRPSVIYSSKDDEGGSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYAAKKSEGSGRLRTALNNSQSQSRVEPHLEPQVLFVYPPEKQLPLKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSVSEKASSYSSLSRYILTTRRCYCILTRLPFFELHFGVLNSIFTEERLQRLTKGIGVLNMESTENLSNEEDLVEDIGCMSLDQSVAEDVHEGKEEYFQRMGDENQVEHQMLDENYQCLKKGISDDTVATLDPEPEVVTAKIESITVHKENHDIDVDDFTRNKQAVDRRFPNAVLPLLRYYQYESSESSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSADLLDILEWAKENKNGSLQIICEYYQLHYPARGCSVKFHPLEHLHPLEYYRSGKTVLHVAGSTIDPRSCSTSLELAEAQGALMVEEEANALSIWTVASICGSLRLEHILSILAGALLEKQIVIVCSNLGILSASVLSMIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAVLVDVNKNQVKAPTIPQLPKQKELFSSLRPYHAELVGESFLGRKRPVHECTDVQVEAAKGFLKVLRLYLDSLCSNLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKRCQRQRAGRQKQKRQRVAVIILAKRKKGVTQWQELEHQALIFKYMVSGIPVPPDLLFTIKRTSLSLDTPFISRLFPHQYPDVGWNYVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTITTALNSNPSSSSSLTHNSTHSFASLTNSETHPHPHPFLYQHASASSAHSSLLPDYRRNRYVYGGKEEDVDEQPFVREEQHSGNMRGFSASSMEDSWQLTPLTMSSSSSSSRYKNGSALEGDYSSYLQLQSFGKYNEMQSKMEREEPQKIMHHFFDEWSAKDRESWVDLDDKSSNNTGAVSATRLSMSIPNHDFSSIFTSNKHNEN | 1127 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3196545 | 3205716 | + | CaPI482276_11g001570.1 | Cam11g0157 | 139079 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0157 | 1127 | Pfam | DENN (AEX-3) domain | 572 | 671 | IPR001194 | - | |
Cam11g0157 | 1127 | ProSiteProfiles | Tripartite DENN domain profile. | 149 | 810 | IPR037516 | - | |
Cam11g0157 | 1127 | SMART | DENN_cls | 274 | 672 | IPR001194 | - | |
Cam11g0157 | 1127 | Gene3D | - | 569 | 765 | IPR043153 | - | |
Cam11g0157 | 1127 | Gene3D | - | 104 | 311 | - | - | |
Cam11g0157 | 1127 | SMART | QLQ_2 | 806 | 837 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cam11g0157 | 1127 | MobiDBLite | consensus disorder prediction | 923 | 955 | - | - | |
Cam11g0157 | 1127 | Pfam | QLQ | 806 | 835 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cam11g0157 | 1127 | MobiDBLite | consensus disorder prediction | 923 | 960 | - | - | |
Cam11g0157 | 1127 | Pfam | uDENN domain | 167 | 244 | IPR005113 | - | |
Cam11g0157 | 1127 | ProSiteProfiles | WRC domain profile. | 872 | 916 | IPR014977 | - | |
Cam11g0157 | 1127 | ProSiteProfiles | QLQ domain profile. | 802 | 837 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cam11g0157 | 1127 | Pfam | WRC | 873 | 915 | IPR014977 | - | |
Cam11g0157 | 1127 | MobiDBLite | consensus disorder prediction | 33 | 57 | - | - | |
Cam11g0157 | 1127 | MobiDBLite | consensus disorder prediction | 442 | 473 | - | - | |
Cam11g0157 | 1127 | PANTHER | DENN DOMAIN-CONTAINING PROTEIN 2 | 40 | 778 | IPR051942 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g1156 | Cam-Chr7:25927467 | Cam11g0157 | Cam-Chr11:3196545 | 1.20E-48 | dispersed | |
Cam08g2143 | Cam-Chr8:26813217 | Cam11g0157 | Cam-Chr11:3196545 | 4.40E-29 | dispersed | |
Cam10g1886 | Cam-Chr10:32929029 | Cam11g0157 | Cam-Chr11:3196545 | 5.40E-28 | dispersed | |
Cam06g0090 | Cam-Chr6:2766612 | Cam11g0157 | Cam-Chr11:3196545 | 8.80E-140 | transposed | |
Cam11g0157 | Cam-Chr11:3196545 | Cam03g1536 | Cam-Chr3:30309457 | 2.30E-78 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52850 | PF02141 | DENN | 4.50E-23 | CL0330 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0157 | - | - | - | 0.0 |