Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0283 ATGGCTGCTGCAATTTCTCTTTGCTCTGTTTTTCTTCTTCTTCTTCTGACTCGGTGGGTCGACTCGGAGCCGACTCAGGATCGACAAGCCCTTCTCGATTTCTTCTCTAAAACTCCTCACGCCAATCGGGTTCAATGGAATACTTCTAATTCTGTCTGTAATTGGGTTGGCGTTGAGTGCGATTCGAATCAGTCGTTTGTTTACTCTCTTCGTTTGCCTGGTGTTGGCCTTGTCGGACCGATTCCGGCCAATACAATCGGGAAATTGACTCAGCTCCGAGTTCTCAGTCTCCGTTCCAACCGTCTCTCCGGCGAGATCCCATCGGATTTTTCCAATTTAGTAATGCTGCGGAATCTGTATCTTCAGGATAATGCTTTCTCCGGCGAGTTTCCGTCGAGTTTGACTCGGTTGACTCGGCTTACTCGGCTGGATTTGTCGTCGAACGACTTCTCCGGTCCGATTCCGCCGTCTGTTGACAATCTGACTCACTTGAGTGGGATTTTCTTGCAGAACAATGGGTTCTCCGGTTCACTCCCGAGTATCTCAGCCGTTAATTTAACAAACTTCAATGTCTCTAACAACAAACTCAACGGTTCGATTCCGAAATCGTTGGCTAAATTCCCCACCTCCTCCTTCGCCGGGAACTTAGATCTCTGCGGCGGACCATTCCCACCCTGCAACCCATTCACTCCCTCTCCATCTCCGTCACAAAACCCTTCACCAGCCCACAAAAAATCGAAGAAACTCTCCACAGCGGCGATAATCGGAATCATAATCGGCGCCGTTTTCGCAGCTTTTCTTCTCCTCCTCTTCCTCATCCTCTGCATTCGGCGGCGGTCCCGCGGACAACAGACGAAGTCAACGAAGCCACCATCGGCGGTGGGAACGGCGGCTCGATCAATTCCAGTAGCAGAGGCCGGAACGTCGTCGTCGAAAGACGACATTACCGGAGGATCAGTGGAGGCGACGGAGAGGAACAAGCTGGTGTTCTTCGAAGGAGGGATTTACAACTTCGATTTGGAGGATTTGTTGAGAGCTTCGGCGGAGGTATTGGGGAAAGGAAGCGTGGGAACGTCGTACAAGGCGGTACTAGAAGAAGGGACGACGGTGGTGGTGAAACGGCTGAAGGATGTGGTGGTGACGAAGAAAGAATTCGAAACTCAAATGGAAATTTTAGGGAAAATTAAACATGAAAATGTGGTTCCTCTCAGAGCATTTTACTTCTCCAAAGATGAAAAACTGCTTGTTTATGATTACATCTCCACCGGAAGTTTGTCGGCCAGCCTTCACGGAAGCAGAGGCTCCGGCAGGACGCCGTTGGACTGGGATTCAAGAATGAGAATAGCTCTAAGCGCCGGCAGGGGATTAGCGCATCTCCACCTCGCCGGCAAGGTGGTTCACGGCAACATTAAATCCTCCAACATCCTTCTCCGCCCGGATCACGACGCCTGCATCTCCGATTTCGGCCTAAACCCACTCTTCGGCACCGCCACGCCGCCGAATCGCGTCGCCGGCTACCGGGCGCCGGAGGTCGTCGAAACCCGAAAAGTCACATTCAAATCCGACGTTTACAGCTACGGCGTTCTCCTCCTTGAGCTCCTGACCGGGAAAGCCCCGAACCAGCAATCCCTCGGCGAGGAGGGAATCGACCTTCCCCGGTGGGTCCAGTCCGTCGTCCGGGAGGAATGGACGGCGGAGGTTTTCGACGCGGAGCTGATGCGGTTCCATAACATTGAAGAAGAGATGGTTCAATTACTGCAGATCGCAATGTCCTGCGTTTCGACGGTTCCCGATCAGCGGCCGGCCATGCCGGAAGTTGTACGGATGATAGAAGATATGAACAGTCATAGAAGTGAGACCGATGACGGGTTGCGCCAGTCTTCCGATGACCCTTCGAAAGGATCGGATGTGAACACGCCGCCGGCGGAATCTAGAACTCCGCCGAGAGTGACGCCGTAG 1959 52.88 MAAAISLCSVFLLLLLTRWVDSEPTQDRQALLDFFSKTPHANRVQWNTSNSVCNWVGVECDSNQSFVYSLRLPGVGLVGPIPANTIGKLTQLRVLSLRSNRLSGEIPSDFSNLVMLRNLYLQDNAFSGEFPSSLTRLTRLTRLDLSSNDFSGPIPPSVDNLTHLSGIFLQNNGFSGSLPSISAVNLTNFNVSNNKLNGSIPKSLAKFPTSSFAGNLDLCGGPFPPCNPFTPSPSPSQNPSPAHKKSKKLSTAAIIGIIIGAVFAAFLLLLFLILCIRRRSRGQQTKSTKPPSAVGTAARSIPVAEAGTSSSKDDITGGSVEATERNKLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYISTGSLSASLHGSRGSGRTPLDWDSRMRIALSAGRGLAHLHLAGKVVHGNIKSSNILLRPDHDACISDFGLNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMPEVVRMIEDMNSHRSETDDGLRQSSDDPSKGSDVNTPPAESRTPPRVTP 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4305745 4310548 - CaPI482276_11g002830.1 Cam11g0283 139205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0283 652 Gene3D Transferase(Phosphotransferase) domain 1 420 633 - -
Cam11g0283 652 Gene3D Ribonuclease Inhibitor 186 226 IPR032675 -
Cam11g0283 652 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Cam11g0283 652 Pfam Protein kinase domain 349 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0283 652 MobiDBLite consensus disorder prediction 303 317 - -
Cam11g0283 652 MobiDBLite consensus disorder prediction 613 652 - -
Cam11g0283 652 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Cam11g0283 652 ProSiteProfiles Protein kinase domain profile. 345 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0283 652 FunFam pollen receptor-like kinase 1 315 419 - -
Cam11g0283 652 MobiDBLite consensus disorder prediction 284 318 - -
Cam11g0283 652 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Cam11g0283 652 Pfam Leucine Rich Repeat 185 206 IPR001611 GO:0005515(InterPro)
Cam11g0283 652 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515(InterPro)
Cam11g0283 652 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Cam11g0283 652 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cam11g0283 652 PANTHER OS05G0588300 PROTEIN 7 618 IPR050994 -
Cam11g0283 652 MobiDBLite consensus disorder prediction 630 644 - -
Cam11g0283 652 SUPERFAMILY L domain-like 25 207 - -
Cam11g0283 652 Gene3D Phosphorylase Kinase; domain 1 313 419 - -
Cam11g0283 652 CDD STKc_IRAK 351 613 - -
Cam11g0283 652 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 420 624 - -
Cam11g0283 652 SUPERFAMILY Protein kinase-like (PK-like) 349 610 IPR011009 -
Cam11g0283 652 MobiDBLite consensus disorder prediction 613 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0211 Cam-Chr1:2408086 Cam11g0283 Cam-Chr11:4305745 1.20E-135 dispersed
Cam04g1076 Cam-Chr4:24924712 Cam11g0283 Cam-Chr11:4305745 3.40E-130 dispersed
Cam05g1028 Cam-Chr5:9281237 Cam11g0283 Cam-Chr11:4305745 3.90E-121 dispersed
Cam05g1297 Cam-Chr5:13251721 Cam11g0283 Cam-Chr11:4305745 2.70E-124 dispersed
Cam07g0481 Cam-Chr7:6738384 Cam11g0283 Cam-Chr11:4305745 1.50E-69 dispersed
Cam07g0702 Cam-Chr7:14836671 Cam11g0283 Cam-Chr11:4305745 2.80E-78 dispersed
Cam10g0895 Cam-Chr10:20046211 Cam11g0283 Cam-Chr11:4305745 9.70E-74 dispersed
Cam10g2202 Cam-Chr10:35427424 Cam11g0283 Cam-Chr11:4305745 5.40E-75 dispersed
Cam11g0145 Cam-Chr11:3132149 Cam11g0283 Cam-Chr11:4305745 4.60E-68 dispersed
Cam11g0283 Cam-Chr11:4305745 Cam11g1410 Cam-Chr11:26771885 2.50E-48 dispersed
Cam02g1963 Cam-Chr2:32744011 Cam11g0283 Cam-Chr11:4305745 5.40E-141 transposed
Cam04g0632 Cam-Chr4:20340382 Cam11g0283 Cam-Chr11:4305745 3.60E-137 transposed
Cam09g1931 Cam-Chr9:34006440 Cam11g0283 Cam-Chr11:4305745 2.50E-66 transposed
Cam10g1909 Cam-Chr10:33160136 Cam11g0283 Cam-Chr11:4305745 5.40E-94 transposed
Cam11g0283 Cam-Chr11:4305745 Cam06g1167 Cam-Chr6:22363903 2.20E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85550 PF00069 Pkinase 4.80E-37 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0283 - - - 0.0