Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0333 ATGGAGGAAAATGAAAACTGTGGCTGTTGGGCTGTCCTTAAACGCACCGTTTCAGATGTCTCCAAATCTTCCCCTTCTTCCAAACATTCCCCCAACTCCATTCCTCGCCTTACCTTACTTTACGATTCAGCTACCGAGACCCGATGTTTAAACGCAAGCGACCGAGATTTGTGTGCGCCGGCCGAAGCTCGGCTATCCTTCGACAATGCTCCGCCGCTGCCGCCGACGAGGTTAGAGGACAAATTTAAACGCCAGTTACTGAAATTTTCATTTCAGGAACTAAGATCGGCGACCGGAAATTTCCGGCCGGATAGCATTCTGGGAGAAGGAGGGTTTGGATTCGTTTTCAAAGGATGGATTGAAGAGAATGGGACGGCGCCGGCCAAACCTGGATCAGGAATCACAGTCGCCGTCAAAAGCTTGAAACCGGATGGTCTTCAAGGACACAGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAACTTATTGGGTACTGTATTGAAGATGATCAAAGGCTTCTTGTATATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTCAGAAGGACTATACCTCTTCCATGGTCAAACAGGATTAAAATTGCACTTGCTGCAGCCAAAGGCTTGGCCTTCCTCCACAATGGTCCGGAACCTGTCATATATAGAGATTTCAAAACATCAAACATATTGCTTGATACAGAGTACAATGCGAAGCTTTCGGATTTTGGTTTGGCAAAGGCTGGGCCTCAAGGAGACAAAACACATGTTTCCACCAGAGTAGTTGGAACATATGGCTATGCTGCGCCAGAATATCTAATGACAGGGCATTTGACATCAAAGAGTGATGTCTATAGCTTCGGTGTTGTCCTACTCGAGATCTTAACGGGGAGGAGATCAATGGACAAGAAACGTCCAAGTGGTGAGCAGAACCTAGTGTCATGGGCTCGACCATATTTAGATGACAAAAGGAAGCTTTACCATATAGTGGACCCTCGCTTGGAGCTTAACTACTCCATCCAGGGGGTTCAAAAAGTCTCTCGACTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGTCCTACCATGGATGAAGTTGTCAAGGTTCTCATTCCACTACAAGATCTTAACGACCTTGCCATCCTAGCATATCATTCACGCCTGTCTCAGCAAGGTCGACGAAAGAAGAAATCAGATGGACTACACCAGTTAACATACACCCAGTCAAGAAATATTAGAACCTCTCCTTTGAATGTTGGAGTTCATCGTCGTCGGTAA 1308 45.95 MEENENCGCWAVLKRTVSDVSKSSPSSKHSPNSIPRLTLLYDSATETRCLNASDRDLCAPAEARLSFDNAPPLPPTRLEDKFKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALAAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLDDKRKLYHIVDPRLELNYSIQGVQKVSRLASHCISRDPKSRPTMDEVVKVLIPLQDLNDLAILAYHSRLSQQGRRKKKSDGLHQLTYTQSRNIRTSPLNVGVHRRR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4913419 4919857 - CaPI482276_11g003330.1 Cam11g0333 139255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0333 435 Pfam Protein tyrosine and serine/threonine kinase 105 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0333 435 FunFam Serine/threonine-protein kinase BIK1 73 186 - -
Cam11g0333 435 CDD STKc_IRAK 107 383 - -
Cam11g0333 435 PANTHER OS01G0588500 PROTEIN-RELATED 80 384 IPR050823 -
Cam11g0333 435 FunFam Probable serine/threonine-protein kinase PBL8 187 400 - -
Cam11g0333 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0333 435 Gene3D Transferase(Phosphotransferase) domain 1 187 395 - -
Cam11g0333 435 ProSiteProfiles Protein kinase domain profile. 101 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0333 435 ProSitePatterns Protein kinases ATP-binding region signature. 107 139 IPR017441 GO:0005524(InterPro)
Cam11g0333 435 SUPERFAMILY Protein kinase-like (PK-like) 84 383 IPR011009 -
Cam11g0333 435 Gene3D Phosphorylase Kinase; domain 1 75 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1201 Cam-Chr6:23179764 Cam11g0333 Cam-Chr11:4913419 1.80E-194 dispersed
Cam07g1431 Cam-Chr7:28876270 Cam11g0333 Cam-Chr11:4913419 6.20E-109 dispersed
Cam09g2015 Cam-Chr9:34761146 Cam11g0333 Cam-Chr11:4913419 2.20E-119 dispersed
Cam09g2016 Cam-Chr9:34771570 Cam11g0333 Cam-Chr11:4913419 4.60E-102 dispersed
Cam10g0024 Cam-Chr10:1881346 Cam11g0333 Cam-Chr11:4913419 1.40E-97 dispersed
Cam10g0207 Cam-Chr10:3766559 Cam11g0333 Cam-Chr11:4913419 1.20E-82 dispersed
Cam10g1796 Cam-Chr10:32137158 Cam11g0333 Cam-Chr11:4913419 3.80E-62 dispersed
Cam10g2238 Cam-Chr10:35627681 Cam11g0333 Cam-Chr11:4913419 2.30E-55 dispersed
Cam10g2255 Cam-Chr10:35737542 Cam11g0333 Cam-Chr11:4913419 3.20E-77 dispersed
Cam11g0333 Cam-Chr11:4913419 Cam11g1148 Cam-Chr11:22539145 5.40E-108 dispersed
Cam11g0333 Cam-Chr11:4913419 Cam09g1885 Cam-Chr9:33533321 6.80E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85554 PF07714 PK_Tyr_Ser-Thr 8.60E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0333 - - - 0.0