Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0368 ATGGTTAGCAATTTCTCTTATAGAAAAGCTTTCATCGACTCCACAATCAAAATTGCAAGATTTTATGGGTTTGATGGGCTTGATTTTTGTTGGGTTTCAGCCAATTCAAGTTCTGACATGTCAAACATGGGGAAACTCTTTCAAGAATGGAGAAAAGCTGCAGAAGTAGAAGCAAGAAGCTCAAAAAAACAAGTCTTGATTTTGACATCAGCAGTTCAATACAAGCCAGATTTGGAAAATGGGTCATCTTTTCCAGTGGATTCCATAAGGAATAATTTGAATTGGGTAAATATTTTGGCTTATGATTATTACATGCCAAATTGGGCAAATTTTACAGCTCCTTTTGCAGCTTTATATGATCCAAAATTAGGAGCAAATACAGATAGTGGAATTGGGAAATGGATTGAAAAAGGATTACCAGCTGCTAATATTCTTTTGGCTTTACCATTTTATGGATATGCTTGGAGGCTTAAAAATGTTGAGAATTTTGGTGTTGGGGCAGCAGCAATTGGGGCAGCAATTACTAATGATGGGTCAATTAGTTATAAGAATATAAAGGAATTTATGGAGAGAAATGGGGTTGATGAAGTGAAATTTAATGGAAGTTATGTGATGAGTTATTGTGTGGTTGGATCTACTTGGATTGCTTTTGATGATGCTGAGGTTGTTAAAATTAAGGTTTCTTATGTTAAACAAAGGAGATTGCTTGGTTACTTTGTTTGGTTGGTGTCTTATGATGACAATTGGGAGCTCTCTTCTGTTGCAGCAAGAGAGTTTGGCAATGAGAAAGAGAAGAAGGTATCATTGCTGATAATCATCCCAAGTACAATTGGTGCAGCCATATTATTACTACTACTAGGATTTTTGTTGTTTAGAAGACTCAAATCCAAAGGAAGAAGATCAAAATTCAATGTAAAAAATCTTGTTGGTGGAGAAGATTTTGGTAGCAATGCACCTGATTTGCAAGTTTTTAGCTTTGATGAGATTGAAAAAGCTACCAATAAGTTTGCTTTCATGAATAAACTTGGACAAGGTGGTTATGGTCCTGTTTATAAGGGTATACTACCAAATGGAAAGGAGATAGCAGTGAAAAGATTGTCAGAAACTTCAGGACAGGGTTTTGAGGAGTTTAAGAATGAAGTTTTGCTCACTGCAAGATTACAACATGTCAATCTTGTGAGAGTTCTTGGATTTTGTGTTGACACTCATCAACATATGTTGGTTTATGAGTACATGCCTAACAAAAGCTTGGACTTCCACCTATTTGGCCTTGGAAGAGGGAATTTGTTGAATTGGGCAAAAAGAGTGGAGATCATTGAAGGGGTAACTCAAGGACTTCTTTACCTACAAGAATACTCAAGATTGACAATAATTCATAGGGATTTGAAGCCTAGCAATATTTTGTTGGATGATGGAATGAAACCGAAAATCTCAGATTTTGGCATGGCTAGAATTTTTGCAAAAGATGAACTTGAAGCAAACACGAGTCGGATTGCGGGAACACATGGTTATATACCTCCTGAGTATGTGAGAAAAGGACTTTATTCTACGAAATCAGATGTATTTAGCTTCGGAGTTCTTCTTCTTCAAATCATAAGTGGCAAGAAGATTACTAAGTTGTATGGAGTGCATGAACATTTGAACCTTCTAGATTATGCATATGAGCTGTGGAAAGATGGCAAAGGAATGGAGTTTATGGATTCATCACTTGATGATTCTGATTCAACTTGCAAACTCACAAGATGCATGCAAATAGCTTTGCTTTGTGTCCAAGAAAATGCAGATGATAGGCCATCCATGTTGGAAATCTCTTCAATGCTTAAAAATACAACTTCAGATATTAAAGCTCCACAAAGACCTGCTTTCTCTACAAAAGAAATTCAACATGAAACTGATGATCATACCCTTACCATTCAACAAGAAACTTACTCAATTTGTACTCCAACAGTTTCCGAATTTGCAGCTCGATGA 1971 36.28 MVSNFSYRKAFIDSTIKIARFYGFDGLDFCWVSANSSSDMSNMGKLFQEWRKAAEVEARSSKKQVLILTSAVQYKPDLENGSSFPVDSIRNNLNWVNILAYDYYMPNWANFTAPFAALYDPKLGANTDSGIGKWIEKGLPAANILLALPFYGYAWRLKNVENFGVGAAAIGAAITNDGSISYKNIKEFMERNGVDEVKFNGSYVMSYCVVGSTWIAFDDAEVVKIKVSYVKQRRLLGYFVWLVSYDDNWELSSVAAREFGNEKEKKVSLLIIIPSTIGAAILLLLLGFLLFRRLKSKGRRSKFNVKNLVGGEDFGSNAPDLQVFSFDEIEKATNKFAFMNKLGQGGYGPVYKGILPNGKEIAVKRLSETSGQGFEEFKNEVLLTARLQHVNLVRVLGFCVDTHQHMLVYEYMPNKSLDFHLFGLGRGNLLNWAKRVEIIEGVTQGLLYLQEYSRLTIIHRDLKPSNILLDDGMKPKISDFGMARIFAKDELEANTSRIAGTHGYIPPEYVRKGLYSTKSDVFSFGVLLLQIISGKKITKLYGVHEHLNLLDYAYELWKDGKGMEFMDSSLDDSDSTCKLTRCMQIALLCVQENADDRPSMLEISSMLKNTTSDIKAPQRPAFSTKEIQHETDDHTLTIQQETYSICTPTVSEFAAR 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5171577 5178050 + CaPI482276_11g003680.1 Cam11g0368 139290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0368 656 SMART serkin_6 336 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0368 656 Pfam Glycosyl hydrolases family 18 1 246 IPR001223 GO:0005975(InterPro)
Cam11g0368 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0368 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 301 411 - -
Cam11g0368 656 Gene3D - 150 217 IPR029070 -
Cam11g0368 656 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 226 622 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam11g0368 656 SMART 2g34 1 246 IPR011583 GO:0008061(InterPro)
Cam11g0368 656 CDD STKc_IRAK 342 609 - -
Cam11g0368 656 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 262 IPR001223 GO:0005975(InterPro)
Cam11g0368 656 SUPERFAMILY Protein kinase-like (PK-like) 319 632 IPR011009 -
Cam11g0368 656 SUPERFAMILY (Trans)glycosidases 1 262 IPR017853 -
Cam11g0368 656 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0368 656 FunFam Uncharacterized protein 412 616 - -
Cam11g0368 656 FunFam Class V chitinase CHIT5b 150 217 - -
Cam11g0368 656 Gene3D Transferase(Phosphotransferase) domain 1 412 632 - -
Cam11g0368 656 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0368 656 Gene3D Glycosidases 1 248 - -
Cam11g0368 656 SUPERFAMILY Chitinase insertion domain 151 217 IPR029070 -
Cam11g0368 656 Gene3D Phosphorylase Kinase; domain 1 312 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g0584 Cam-Chr10:8981569 Cam11g0368 Cam-Chr11:5171577 1.20E-85 dispersed
Cam10g0585 Cam-Chr10:9001580 Cam11g0368 Cam-Chr11:5171577 1.00E-86 dispersed
Cam11g0365 Cam-Chr11:5152986 Cam11g0368 Cam-Chr11:5171577 3.20E-18 dispersed
Cam11g0368 Cam-Chr11:5171577 Cam11g1759 Cam-Chr11:30146808 7.00E-67 dispersed
Cam11g0366 Cam-Chr11:5160466 Cam11g0368 Cam-Chr11:5171577 1.60E-44 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85555 PF00069 Pkinase 5.10E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0368 - - - 0.0