Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0369 ATGGTTTGTCATCTGAGGAAGGAGAAAAGAGACTTCAAATCTTTTGGCCCTAACAAACTTGAAGAGAAAAAAGAGAGCAAATTCCTCAAGTTTTTGGGGTTCATGTGGAACCCCCTCTCATGGGTCATGGAATCTGCTGCTATCATGGCTATTGTCTTGGCCAATGGAGGGGGAAAGCCTCCGGACTGGCAAGATTTTGTTGGAATAGTGGTGTTGCTCATTATCAACTCTACCATCAGTTTTATTGAAGAGAACAATGCAGGTAATGCAGCTGCTGCTCTAATGGCAGGACTTGCTCCAAAAACCAAGGTTTTGAGAGATGGAAAATGGAGTGAGGAAGAGGCAGCTATTTTAGTACCAGGAGATTTAATCAGTATCAAGTTGGGAGATATTGTCCCTGCTGATGCAAGACTCTTGGAAGGCGATCCTCTTAAGATCGATCAATCTGCTCTCACCGGCGAATCCTTACCGGTTACCAAGAACCCGGGCGACAAGGTTTTCTCTGGCTCGACTTGTAAACAAGGAGAAATTGAGGCTATTGTTATTGCCCCTGGTGTCCACACCTTCTTTGGCAAGGCAGCTCATCTTGTTGATAGCACTAACCAAGTTGGTCATTTCCAAAAGGTGTTGACAGCCATTGGTAACTTCTGCATTTGCTCCATTGCTCTAGGAATGCTCATTGAAATCATAGTGATGTACCCAATCCAAAATAGGGCATACAGAGAGGGCATTGATAACTTGCTGGTTCTTCTCATCGGTGGCATTCCAATTGCCATGCCGACAGTGTTGTCGGTGACCATGGCTATTGGTTCTCACCGTCTAGCGGAGCAAGGTGCTATTACCAAAAGAATGACAGCCATTGAAGAAATGGCAGGAATGGATGTGCTTTGTAGTGACAAGACTGGGACTCTCACCCTCAACAAGCTGACAGTGGACAAGAGTTTGATTGAAGTATTTTCAAAGAATACCGATGCAGACACATTACTTCTGCTGGCTGCAAGAGCTTCAAGAGTTGAGAACCAAGATGCTATCGATGCTTCGATCGTCGGGATGTTGGGTGATCCAAAGGAGGCAAGAGCAGGGATCACTGAGGTACATTTCTTACCTTTCAATCCTGTTGAGAAGCGCACTGCTATCACTTACATTGATAGTAATGGAAACTGGCATAGAAGTAGCAAGGGTGCTCCGGAACAGATAATTGACCTTTGTGACCTCAAAGGGGAGATAAGGAAGAAGGCTCATGATATTATCAGTAATTATGCAGATCGTGGTCTTCGTTCTCTAGCCGTCGCTCGTCAGACTGTTCTAGAGAAAACCAAAGAGAGTGCTGGAGAGCCATGGGACTTTGTGGGCTTGTTGCCCCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACTATTCATCAAGCACTCGAACTCGGGGTAAATGTTAAGATGATCACTGGAGATCAATTGGCCATTGGAAAAGAGACCGGTCGTAGGCTTGGTATGGGCACCAATATGTATCCATCATCTTCCTTACTTGGTCAAAGCAAGGATGAATCCATTGCTAGCATTCCTGTTGATGAACTTATTGAGAAGGCAGATGGGTTTGCTGGTGTCTTCCCAGAACACAAGTATGAGATAGTGAAAAAGCTCCAAGAGAGGAAACACATTTGTGGGATGACTGGTGATGGTGTTAACGATGCCCCTGCGCTCAAGAAGGCCGACATCGGAATTGCTGTAGCTGATGCAACTGATGCAGCAAGGAGTGCATCAGACATTGTTTTAACAGAACCAGGTCTCAGTGTAATCGTGAGTGCAGTTCTAACAAGTAGGGCCATCTTTCAAAGGATGAAAAACTACACAATCTATGCAGTTTCCATCACAATCCGAATCGTGTTGGGTTTCTTGCTTGTAGCTCTGATATGGAAGTTTTGA 1920 45.1 MVCHLRKEKRDFKSFGPNKLEEKKESKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEEEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPGDKVFSGSTCKQGEIEAIVIAPGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMLIEIIVMYPIQNRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFSKNTDADTLLLLAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDSNGNWHRSSKGAPEQIIDLCDLKGEIRKKAHDIISNYADRGLRSLAVARQTVLEKTKESAGEPWDFVGLLPLFDPPRHDSAETIHQALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLVALIWKF 639
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 5179970 5182978 + CaPI482276_11g003690.1 Cam11g0369 139291
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0369 639 SUPERFAMILY Calcium ATPase, transduction domain A 100 197 IPR008250 -
Cam11g0369 639 FunFam Plasma membrane ATPase 100 184 - -
Cam11g0369 639 Gene3D - 34 111 - -
Cam11g0369 639 Gene3D - 158 301 - -
Cam11g0369 639 FunFam Plasma membrane ATPase 309 456 - -
Cam11g0369 639 PRINTS H+-transporting ATPase (proton pump) signature 413 431 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 PRINTS H+-transporting ATPase (proton pump) signature 556 572 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 PRINTS H+-transporting ATPase (proton pump) signature 587 612 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 PRINTS H+-transporting ATPase (proton pump) signature 528 544 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 SFLD C1.7: P-type atpase like 279 608 - -
Cam11g0369 639 Gene3D - 453 593 IPR023214 -
Cam11g0369 639 PANTHER CALCIUM-TRANSPORTING ATPASE 11 636 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Cam11g0369 639 SUPERFAMILY HAD-like 293 603 IPR036412 -
Cam11g0369 639 NCBIfam HAD-IC family P-type ATPase 531 635 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 NCBIfam HAD-IC family P-type ATPase 69 327 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam11g0369 639 CDD P-type_ATPase_H 13 639 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cam11g0369 639 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 639 IPR023298 -
Cam11g0369 639 NCBIfam plasma-membrane proton-efflux P-type ATPase 9 639 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cam11g0369 639 Pfam E1-E2 ATPase 99 276 - -
Cam11g0369 639 ProSitePatterns E1-E2 ATPases phosphorylation site. 299 305 IPR018303 -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 473 483 - -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 556 575 - -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 147 161 - -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 579 591 - -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 297 311 - -
Cam11g0369 639 PRINTS P-type cation-transporting ATPase superfamily signature 451 462 - -
Cam11g0369 639 FunFam Plasma membrane ATPase 448 604 - -
Cam11g0369 639 SMART Cation_ATPase_N_a_2 6 55 IPR004014 -
Cam11g0369 639 Pfam haloacid dehalogenase-like hydrolase 293 570 - -
Cam11g0369 639 Pfam Cation transporter/ATPase, N-terminus 13 49 IPR004014 -
Cam11g0369 639 SFLD p-type atpase 279 608 IPR044492 -
Cam11g0369 639 Gene3D - 309 452 IPR023299 GO:0000166(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam11g0369 Cam-Chr11:5179970 Cam11g1173 Cam-Chr11:23061659 3.40E-42 dispersed
Cam11g0369 Cam-Chr11:5179970 Cam11g1227 Cam-Chr11:24373159 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0369 K01535 - csv:101211582 1138.25