Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0370 | ATGACCATCTCCAAGGATAGAGTGAAGCCATCTCCTATGCCTGATTCATGGAAGCTAAACGAAATTTTCGCCACCGGTGTTGTTCTTGGAACGTACATGGCTATCATGACTGTGGTCTTCTTCTGGCTAACATATCAGACTGATTTCTTTCCAAAAACATTTGGGGTGAAGCAAATCAGTGAAAATCTAGCAGAGCTTAACTCTGCTCTTTACCTCCAAGTGAGCATCATTAGCCAAGCCCTCATCTTCATGACGCGATCAAGGAGTTGGTCCTTTGTAGAGCGCCCTGGTGTTTTGCTAGTTGGAGCCTTCCTAATAGCTCAGCTGAATTCATGGCATTGGTTGGGATGGGCAGGAGTGATCTGGATTTACAGCATCATCACATACCTCCCCCTTGATGTCCTCAAATTCATCATCCACCATGCATTGACTGGGAAGGCCTGGGATAATTTGCTTCAAAACAAGACTGCATTCACAACTAAGAAGGATTATGAAAAAGGAGAAAGGGAGGCACAATGGGCATCAGCACAACGTACACTTCACGGCTTACAGAAACCAGAAGCGCTATTTAACGACACGAGTAGCTACCGAGAGCTTTCTGAGATCACAGAACAAGCAAAGAGAAGAGCTGAAGTTGCCAGGATGAGTCAGAATGTATGA | 660 | 45.15 | MTISKDRVKPSPMPDSWKLNEIFATGVVLGTYMAIMTVVFFWLTYQTDFFPKTFGVKQISENLAELNSALYLQVSIISQALIFMTRSRSWSFVERPGVLLVGAFLIAQLNSWHWLGWAGVIWIYSIITYLPLDVLKFIIHHALTGKAWDNLLQNKTAFTTKKDYEKGEREAQWASAQRTLHGLQKPEALFNDTSSYRELSEITEQAKRRAEVARMSQNV | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5183031 | 5184170 | + | CaPI482276_11g003700.1 | Cam11g0370 | 139292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0370 | 219 | Gene3D | - | 1 | 142 | - | - | |
Cam11g0370 | 219 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 171 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
Cam11g0370 | 219 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 3 | 141 | IPR023298 | - | |
Cam11g0370 | 219 | Gene3D | - | 194 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam11g0370 | Cam-Chr11:5183031 | Cam11g1227 | Cam-Chr11:24373159 | 2.00E-82 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0370 | K01535 | - | csv:101211582 | 389.808 |