Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0432 ATGGCAACTTACTACGCTAGTTCGAATAACGAAAGGGATGCTACTCCCATCCTCTATTCAAGGGGATCTTTGCTCGGTTCGTATGAAGAAACAACAGTTCTTCCACGGAATATGATGATGCATGTAAATTCTGGGACATACATGGATTCATTGCCTTCGCAGGCGCAAAATGGTTGTGGTCAGATAACGTCCGTTGGAGCAGCGGGAACTACCCAACAGCAGCAAGAGTTTTTATCGAATCTTGGTGGTTCGCAAATTGCTGAGCATGATTTCAATACATGGAGAGAGAACCGGAGTGAAATGCTTAGCACAAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCATAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGCAATCCAAATCCCTTCAATCCCCTACAGAAATTCGGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCGACTAATTCAGGCGAGGATGGCTGCAGAAATGGCGCTTCTAGAGACGAACAGATGAGAAATGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGAATTATCTCAATACAGCATGTCTAGTATTGCAAGAACTATGCCCAATTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAATGAGAGAAACCAGAGTTCACATGAGCATGAAACTAGAAGTGCAAAGAATGGTGATGCAGGAACCAAAAATGACAGTTCGATGCTCACTGCGAGTGGAGCATCTTCAAACCCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCACATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTGTACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCATCAGATGCAGATTGTGGTGTCATCATTTGATGTGATAGCTGGATGTGGGGCATCTAAACCATATACTGCACTTGCTCTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTCAGAGCTACCCGTAAAAGTCTAGGAGAGCATGAAAATTCTGGAAATGACAAAGGAGTTGGAATCACTCGTCTCCGATATGTGGACCAGCAGTTAAGGCAACAGAGGGCTCTTCAGCAGCTTGGTATGATTCAGCAGCATGCTTGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTGGCACGGCAGACAGGATTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGAAGTGTAGACATGGACTCTATATCATCATCTGAAAATGCTGTCAAGGCAACAAAAGGAGATAACAAGACCTTTGAGGATGATAAAGAGGAGGATCTGCAACAAACTGCAAGCTCAACAGCCACCGAAAGATGTAGTGCTGGAGACATTATCGACTTAAAATCTGATCAAGTCTCTAATCTCGGAAATTCCAGTTCCAACAGACTAGCTAGTTTCCAAAATGGTGCTCACATTGAAGCCCGAAATGAGCTGGTGAAACCGAGTGAGGAGTTAAGGCCTAATGTAAATAACTCTAGTTTCTTCCCTGATGCAATTGTCCACTCTCAGGGTGAGAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAATTGGGAAGGTTTGGGACGGTTGGCGGGGTATCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCATGCCTATGCCTGCTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAATGCCGCAGCGTCTTCTCTTGGGGAAACGGTGCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCGAGGTTTGGCCCTTCCCATCTTTATCATGATTTTGTTGTGTAA 2046 44.97 MATYYASSNNERDATPILYSRGSLLGSYEETTVLPRNMMMHVNSGTYMDSLPSQAQNGCGQITSVGAAGTTQQQQEFLSNLGGSQIAEHDFNTWRENRSEMLSTNSMRGPTNVLHGGHNLQGQGLSLTLSTQIPSAIQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQMRNGENLPPNFQELAKGELSQYSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSSHEHETRSAKNGDAGTKNDSSMLTASGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAVKATKGDNKTFEDDKEEDLQQTASSTATERCSAGDIIDLKSDQVSNLGNSSSNRLASFQNGAHIEARNELVKPSEELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGMPMPAGTHHGFAAMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGPSHLYHDFVV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5734054 5737177 + CaPI482276_11g004320.1 Cam11g0432 139354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0432 681 Pfam Homeobox KN domain 423 462 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam11g0432 681 SUPERFAMILY Homeodomain-like 407 474 IPR009057 -
Cam11g0432 681 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 158 500 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cam11g0432 681 MobiDBLite consensus disorder prediction 486 517 - -
Cam11g0432 681 MobiDBLite consensus disorder prediction 150 187 - -
Cam11g0432 681 FunFam BEL1-like homeodomain protein 4 409 471 - -
Cam11g0432 681 SMART prehox3 201 356 IPR006563 -
Cam11g0432 681 ProSiteProfiles 'Homeobox' domain profile. 403 466 IPR001356 GO:0003677(InterPro)
Cam11g0432 681 MobiDBLite consensus disorder prediction 150 167 - -
Cam11g0432 681 Gene3D - 401 479 - -
Cam11g0432 681 SMART HOX_1 406 470 IPR001356 GO:0003677(InterPro)
Cam11g0432 681 MobiDBLite consensus disorder prediction 231 285 - -
Cam11g0432 681 Pfam Associated with HOX 208 355 IPR006563 -
Cam11g0432 681 Coils Coil 288 308 - -
Cam11g0432 681 MobiDBLite consensus disorder prediction 253 285 - -
Cam11g0432 681 CDD homeodomain 406 467 IPR001356 GO:0003677(InterPro)
Cam11g0432 681 MobiDBLite consensus disorder prediction 231 252 - -
Cam11g0432 681 MobiDBLite consensus disorder prediction 495 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1346 Cam-Chr2:26108584 Cam11g0432 Cam-Chr11:5734054 3.20E-72 dispersed
Cam02g2320 Cam-Chr2:35734900 Cam11g0432 Cam-Chr11:5734054 1.20E-80 dispersed
Cam03g0294 Cam-Chr3:4144824 Cam11g0432 Cam-Chr11:5734054 1.70E-60 dispersed
Cam08g2169 Cam-Chr8:27079425 Cam11g0432 Cam-Chr11:5734054 1.20E-37 dispersed
Cam09g0271 Cam-Chr9:3279251 Cam11g0432 Cam-Chr11:5734054 2.80E-92 dispersed
Cam10g2115 Cam-Chr10:34766345 Cam11g0432 Cam-Chr11:5734054 3.70E-49 dispersed
Cam11g0432 Cam-Chr11:5734054 Cam10g1793 Cam-Chr10:32060581 1.50E-83 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52870 PF07526 POX 4.00E-51 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0432 - - - 0.0