Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0470 | ATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAACGCCGCCGCTGTCGTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCTGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCCCCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACTCCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCACCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTGCTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTACGACGAGCTGATGGCGGCAACCTCAGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATTTGGTGTCCCTTGTCGGGTATTGTATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAATGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTGTCACCCTCGCATTATCCACAGAGATATCAAGACGGCCAATATTCTTATAGACATGAGTTTCGAGGCTAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAATTACACTCATGTATCGACTCGCGTCATGGGCACATTTGGATATTTGGCTCCCGAGTATGCATCAAGTGGGAAGCTAACGGAGAAATCAGATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTGATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGAGTACGGCCTAAACCCTTCCTCAACAAGCAGCGAAATGAGTCGGAAGCCTAGTCGTTTATCCTCCCCCGATGCACCCCCCTCACATTCTTAA | 2085 | 54.87 | MNIAKQEGRQWQNNRRRRVSQRRRCRFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDSSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRMKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSDGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSEYGLNPSSTSSEMSRKPSRLSSPDAPPSHS | 694 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6176088 | 6182217 | - | CaPI482276_11g004700.1 | Cam11g0470 | 139392 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0470 | 694 | ProSiteProfiles | Protein kinase domain profile. | 332 | 610 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 610 | 636 | - | - | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 657 | 694 | - | - | |
Cam11g0470 | 694 | FunFam | Proline-rich receptor-like protein kinase PERK1 | 408 | 615 | - | - | |
Cam11g0470 | 694 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 360 | IPR017441 | GO:0005524(InterPro) | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 62 | 172 | - | - | |
Cam11g0470 | 694 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 452 | 464 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 174 | 193 | - | - | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 25 | 61 | - | - | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 620 | 636 | - | - | |
Cam11g0470 | 694 | Pfam | Protein tyrosine and serine/threonine kinase | 337 | 604 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam11g0470 | 694 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 615 | - | - | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 1 | 193 | - | - | |
Cam11g0470 | 694 | SMART | serkin_6 | 332 | 604 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam11g0470 | 694 | MobiDBLite | consensus disorder prediction | 226 | 306 | - | - | |
Cam11g0470 | 694 | FunFam | proline-rich receptor-like protein kinase PERK1 | 310 | 407 | - | - | |
Cam11g0470 | 694 | Gene3D | Phosphorylase Kinase; domain 1 | 309 | 407 | - | - | |
Cam11g0470 | 694 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 604 | IPR011009 | - | |
Cam11g0470 | 694 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 167 | 648 | IPR047117 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0920 | Cam-Chr6:13690277 | Cam11g0470 | Cam-Chr11:6176088 | 4.40E-159 | dispersed | |
Cam10g0578 | Cam-Chr10:8930937 | Cam11g0470 | Cam-Chr11:6176088 | 1.40E-60 | dispersed | |
Cam11g0309 | Cam-Chr11:4618815 | Cam11g0470 | Cam-Chr11:6176088 | 1.00E-161 | dispersed | |
Cam11g0470 | Cam-Chr11:6176088 | Cam11g0552 | Cam-Chr11:6992725 | 4.30E-123 | dispersed | |
Cam11g0466 | Cam-Chr11:6133566 | Cam11g0470 | Cam-Chr11:6176088 | 4.60E-37 | proximal | |
Cam05g2759 | Cam-Chr5:34820014 | Cam11g0470 | Cam-Chr11:6176088 | 6.50E-54 | transposed | |
Cam07g0938 | Cam-Chr7:23065294 | Cam11g0470 | Cam-Chr11:6176088 | 2.50E-170 | transposed | |
Cam11g0470 | Cam-Chr11:6176088 | Cam05g2122 | Cam-Chr5:29683304 | 2.20E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85558 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-46 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0470 | - | - | - | 0.0 |