Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0470 ATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAACGCCGCCGCTGTCGTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCTGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCCCCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACTCCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCACCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTGCTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTACGACGAGCTGATGGCGGCAACCTCAGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACGGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATTTGGTGTCCCTTGTCGGGTATTGTATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAATGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTGTCACCCTCGCATTATCCACAGAGATATCAAGACGGCCAATATTCTTATAGACATGAGTTTCGAGGCTAAGGTGGCTGATTTTGGATTGGCGAAGCTCAACCAAGACAATTACACTCATGTATCGACTCGCGTCATGGGCACATTTGGATATTTGGCTCCCGAGTATGCATCAAGTGGGAAGCTAACGGAGAAATCAGATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTGATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGAGTACGGCCTAAACCCTTCCTCAACAAGCAGCGAAATGAGTCGGAAGCCTAGTCGTTTATCCTCCCCCGATGCACCCCCCTCACATTCTTAA 2085 54.87 MNIAKQEGRQWQNNRRRRVSQRRRCRFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDSSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRMKIALGSAKGLAYLHEDCHPRIIHRDIKTANILIDMSFEAKVADFGLAKLNQDNYTHVSTRVMGTFGYLAPEYASSGKLTEKSDIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSDGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSEYGLNPSSTSSEMSRKPSRLSSPDAPPSHS 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6176088 6182217 - CaPI482276_11g004700.1 Cam11g0470 139392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0470 694 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0470 694 MobiDBLite consensus disorder prediction 610 636 - -
Cam11g0470 694 MobiDBLite consensus disorder prediction 657 694 - -
Cam11g0470 694 FunFam Proline-rich receptor-like protein kinase PERK1 408 615 - -
Cam11g0470 694 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524(InterPro)
Cam11g0470 694 MobiDBLite consensus disorder prediction 62 172 - -
Cam11g0470 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0470 694 MobiDBLite consensus disorder prediction 174 193 - -
Cam11g0470 694 MobiDBLite consensus disorder prediction 25 61 - -
Cam11g0470 694 MobiDBLite consensus disorder prediction 620 636 - -
Cam11g0470 694 Pfam Protein tyrosine and serine/threonine kinase 337 604 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0470 694 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Cam11g0470 694 MobiDBLite consensus disorder prediction 1 193 - -
Cam11g0470 694 SMART serkin_6 332 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0470 694 MobiDBLite consensus disorder prediction 226 306 - -
Cam11g0470 694 FunFam proline-rich receptor-like protein kinase PERK1 310 407 - -
Cam11g0470 694 Gene3D Phosphorylase Kinase; domain 1 309 407 - -
Cam11g0470 694 SUPERFAMILY Protein kinase-like (PK-like) 307 604 IPR011009 -
Cam11g0470 694 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 167 648 IPR047117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0920 Cam-Chr6:13690277 Cam11g0470 Cam-Chr11:6176088 4.40E-159 dispersed
Cam10g0578 Cam-Chr10:8930937 Cam11g0470 Cam-Chr11:6176088 1.40E-60 dispersed
Cam11g0309 Cam-Chr11:4618815 Cam11g0470 Cam-Chr11:6176088 1.00E-161 dispersed
Cam11g0470 Cam-Chr11:6176088 Cam11g0552 Cam-Chr11:6992725 4.30E-123 dispersed
Cam11g0466 Cam-Chr11:6133566 Cam11g0470 Cam-Chr11:6176088 4.60E-37 proximal
Cam05g2759 Cam-Chr5:34820014 Cam11g0470 Cam-Chr11:6176088 6.50E-54 transposed
Cam07g0938 Cam-Chr7:23065294 Cam11g0470 Cam-Chr11:6176088 2.50E-170 transposed
Cam11g0470 Cam-Chr11:6176088 Cam05g2122 Cam-Chr5:29683304 2.20E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85558 PF07714 PK_Tyr_Ser-Thr 2.60E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0470 - - - 0.0