Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0485 ATGCCTTCTCTCCTCTCACCTTCTTCCATGTGGAGCGAGCTTTGCCTGAGGCCAACACCACCTCCACTCAATGCCACCGATGAAACCCCCGTCGAATGCTACGCCTGCACTCAAGTCGGCGTTCCAGCCTTCCACTCCACCAGCTGCGACCACGCTCACCAGCAACCCGAATGGGAAGCCTCCGCGGGTTCTTCCCTCGTTCCCATTCAACCCACCAAACCCTCCCCGTCTCGCCGCCCCACACTGCCACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCGAGAACCAAGCCGGTTCAAAGATGGAACCGGGTTCTGTTATTGGCCCGTGGAATGGCTCTCGCTGTTGATCCTCTTTACTTCTACGCTCTGTCTATCGGAAGAGGAGGCTCCCCCTGCCTCTACATGGACGGTGGATTGGCCGCCGTCGTCACCGTCCTCCGCACGTGCCTCGATTTCGTTCACTTGTGGCACGTTTGGCTTCAATTCCGCCTCGCTTACGTGTCCAAAGAGAGTATGGTGATTGGCTGTGGGAAACTCGTGTGGGACGCACGTGCTATCGCCTCTCATTACGTTCGTTCCTTCAAAGGCTTCTGGTTTGATGCCTTTGTCATCCTCCCCGTTCCTCAGATTGTTTATTGGTTTGTTTTACCAAAACTGATCAGAGAAGAGAGAATAAAACTTATAATGACAGTTGTCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGATACATCTTCGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAACGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAATCTATCTCTGTCTTGCTCTGAGGAGGTGTGTTATCAGTTTCTCTCATCAGCGACAACAATTGAAAGTTCGTGTGGTCGTAATTCGACTGCTACATTTAGGAAGCCACTATGCTTGGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTAGCGGTCAAAATCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGCACCTTTGGCAATGATCTGGAGCCTACCAGTAATTGGCTAGAAGTATGCTTCAGTATTTGCACGGTGCTAAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTAATATCCAGGTTCTTTTGCACGCTGTCATGGCAAGGAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGGCAACGAGTTCGACACTACGAACACCAAAGATGGGCAGCCATGGGCGGAGAAGATGAGATGGAACTAATCAATGATTTGCCCGAAGGTCTTCGAAGAGACATTAAACGTCATCTTTGTGTTGATCTAATCAGAAAGGTGCCTCTCTTCCAAAACCTGGAGGAGCTGATTCTAGACAACATATGTGATCGAGTCAAGCCACTTGTATTCTCCAAAGATGAAAAGATTATCAGAGAAGGGGATCCTGTTCCAAGGATGTTGTTCATAGTGTGTGGACGAGTAAAACGTAGCCAAAGCCTAAGCAAGGGTATGACAGCAACAAGTTGGATTGAACCAGGAGGATTTCTTGGCGATGAGCTGCTATCGTGGTGTCTTCGACGCCCATTTCTGGAGAGACTTCCAGCTTCATCCGCTACATTTGTTTGCATTGAACCAACAGAAGCATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGCTACAAATTCGCGAACGAGAGACTGAAGAGAACTGCAAGATATTACTCCTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTCGCTTGGCGTCGATACCGAAAGAGGATGAGACGGCCAGTGATAGCCGTGGTGGAAAATGGAAGCAATGAACGTAGGCTTTTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACATGACCATCTTGAATAG 2085 48.3 MPSLLSPSSMWSELCLRPTPPPLNATDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPSPSRRPTLPHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSKESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVVLLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLSSATTIESSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRQRVRHYEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLEELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRSQSLSKGMTATSWIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVIAVVENGSNERRLLQYAAMFMSFRPHDHLE 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6373777 6378085 - CaPI482276_11g004850.1 Cam11g0485 139407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0485 694 Gene3D - 137 431 - -
Cam11g0485 694 SUPERFAMILY cAMP-binding domain-like 434 621 IPR018490 -
Cam11g0485 694 MobiDBLite consensus disorder prediction 60 84 - -
Cam11g0485 694 Gene3D Jelly Rolls 505 623 IPR014710 -
Cam11g0485 694 ProSiteProfiles cAMP/cGMP binding motif profile. 507 586 IPR000595 -
Cam11g0485 694 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 661 - -
Cam11g0485 694 Gene3D Helix hairpin bin 433 498 - -
Cam11g0485 694 Pfam Cyclic nucleotide-binding domain 527 616 IPR000595 -
Cam11g0485 694 CDD CAP_ED 507 614 IPR000595 -
Cam11g0485 694 SUPERFAMILY Voltage-gated potassium channels 95 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1717 Cam-Chr7:31911849 Cam11g0485 Cam-Chr11:6373777 7.70E-198 dispersed
Cam10g0598 Cam-Chr10:9172520 Cam11g0485 Cam-Chr11:6373777 1.10E-184 dispersed
Cam11g0485 Cam-Chr11:6373777 Cam10g1241 Cam-Chr10:25824489 2.70E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0485 K05391 - csv:101203560 1331.62