Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0513 CTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA 906 43.82 LDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6559526 6564381 - CaPI482276_11g005130.1 Cam11g0513 139435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0513 301 Gene3D Mitochondrial carrier domain 7 301 IPR023395 -
Cam11g0513 301 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 300 - -
Cam11g0513 301 Pfam Mitochondrial carrier protein 11 85 IPR018108 -
Cam11g0513 301 Pfam Mitochondrial carrier protein 104 191 IPR018108 -
Cam11g0513 301 Pfam Mitochondrial carrier protein 215 297 IPR018108 -
Cam11g0513 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 190 IPR018108 -
Cam11g0513 301 PRINTS Mitochondrial carrier protein signature 19 33 IPR002067 GO:0055085(InterPro)
Cam11g0513 301 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085(InterPro)
Cam11g0513 301 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085(InterPro)
Cam11g0513 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 294 IPR018108 -
Cam11g0513 301 SUPERFAMILY Mitochondrial carrier 4 291 IPR023395 -
Cam11g0513 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 87 IPR018108 -
Cam11g0513 301 FunFam Mitochondrial substrate carrier family protein 7 298 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0797 Cam-Chr5:7049466 Cam11g0513 Cam-Chr11:6559526 1.70E-82 dispersed
Cam05g1984 Cam-Chr5:28661642 Cam11g0513 Cam-Chr11:6559526 9.20E-66 dispersed
Cam09g0170 Cam-Chr9:2452657 Cam11g0513 Cam-Chr11:6559526 6.40E-12 dispersed
Cam10g0164 Cam-Chr10:3252668 Cam11g0513 Cam-Chr11:6559526 1.70E-10 dispersed
Cam11g0513 Cam-Chr11:6559526 Cam09g0080 Cam-Chr9:1669681 2.60E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0513 K15121 - csv:101206140 575.474