Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0513 | CTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCCAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA | 906 | 43.82 | LDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6559526 | 6564381 | - | CaPI482276_11g005130.1 | Cam11g0513 | 139435 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0513 | 301 | Gene3D | Mitochondrial carrier domain | 7 | 301 | IPR023395 | - | |
Cam11g0513 | 301 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 300 | - | - | |
Cam11g0513 | 301 | Pfam | Mitochondrial carrier protein | 11 | 85 | IPR018108 | - | |
Cam11g0513 | 301 | Pfam | Mitochondrial carrier protein | 104 | 191 | IPR018108 | - | |
Cam11g0513 | 301 | Pfam | Mitochondrial carrier protein | 215 | 297 | IPR018108 | - | |
Cam11g0513 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 102 | 190 | IPR018108 | - | |
Cam11g0513 | 301 | PRINTS | Mitochondrial carrier protein signature | 19 | 33 | IPR002067 | GO:0055085(InterPro) | |
Cam11g0513 | 301 | PRINTS | Mitochondrial carrier protein signature | 163 | 181 | IPR002067 | GO:0055085(InterPro) | |
Cam11g0513 | 301 | PRINTS | Mitochondrial carrier protein signature | 219 | 241 | IPR002067 | GO:0055085(InterPro) | |
Cam11g0513 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 294 | IPR018108 | - | |
Cam11g0513 | 301 | SUPERFAMILY | Mitochondrial carrier | 4 | 291 | IPR023395 | - | |
Cam11g0513 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 87 | IPR018108 | - | |
Cam11g0513 | 301 | FunFam | Mitochondrial substrate carrier family protein | 7 | 298 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g0797 | Cam-Chr5:7049466 | Cam11g0513 | Cam-Chr11:6559526 | 1.70E-82 | dispersed | |
Cam05g1984 | Cam-Chr5:28661642 | Cam11g0513 | Cam-Chr11:6559526 | 9.20E-66 | dispersed | |
Cam09g0170 | Cam-Chr9:2452657 | Cam11g0513 | Cam-Chr11:6559526 | 6.40E-12 | dispersed | |
Cam10g0164 | Cam-Chr10:3252668 | Cam11g0513 | Cam-Chr11:6559526 | 1.70E-10 | dispersed | |
Cam11g0513 | Cam-Chr11:6559526 | Cam09g0080 | Cam-Chr9:1669681 | 2.60E-69 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0513 | K15121 | - | csv:101206140 | 575.474 |