Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0535 ATGTTGTTCCTCTACCCTAAACTCAAAAGAAAAAGAAAAGAAAAAAGTGAAGGAGATTCAAAGAAAAAGGTTAAAAAGATGAGTGGGGCAGGAAGAAGTGCAAAGGATGATGATGAAGAGAAGAGCAGTATTAGCACTCATTTAATGGGAATGAAGAGAACTGAGGCTACTGTTTCCTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGTTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGATTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCTTAGGGACTCCAAGCCAGAACCTGTCTGGGACTCTTTCTCCAACCATTGGGAATTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATAACAGGCCCAATTCCCCCAGAGCTTGGGAGGCTCTCAAAGCTCCAAACACTTGACCTATCAAACAATTTCTTCACAGGGGAAATTCCTTCTCCTTTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTTTAGCTAACATGACACAACTTGCCTTTCTTGATGTGTCTTATAATAATATCAGTGGTCCTCTGCCTAGATTTCCCAGCAAAACATTCAACATTGTTGGGAACCCTCTGATTTGTGCAACTGGGTCCGAGGCCGGTTGCCACGGTACAACTCTAATGCCCATGTCCATGAATTTGAACAGTACACAAACTGGTTTACCTGCTGTGAAATTGAAGAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTATGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGAGAAAACGAAGCAATCAACCTACATTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCGCTTGGAAATCTGAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAATTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCAGATGGAACGGTTGTTGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGCAGAGGCGAAATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCCGTGCACCGTCATCTCCTCAGATTATACGGATTTTGCAACACACCAACTGAAAGGCTTCTTGTTTACCCATATATGTCGAATGGAAGTGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGGATTGCTATAGGAGCTGCAAGGGGATTGTTATACCTACATGAACAGTGTGACCCAAAGATAATACATAGAGATGTTAAGGCTGCAAACATATTGCTTGATGACTACTGCGAGGCTGTCGTCGGAGATTTCGGGTTAGCAAAGCTTCTGGATCATCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGACATATAGCTCCTGAGTATCTATCCACCGGACAGTCCTCCGAGAAAACGGATGTTTTCGGCTTTGGAATCCTACTCCTTGAACTGATCACAGGGCAGAGAGCCCTTGAGTTTGGCAAAGCAGCTAATCAGAAAGGAGGCATTCTTGACTGGGTGAAGAAGATTCACCTAGAGAAGAAGCTGGAAATGTTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAACTAGAGGAGATGGTTCAAGTGGCTTTATTGTGCACACAATACCTACCAGGACATAGACCAAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTGAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCCCATGATTTCTCTTCCTCAGACAGATACTCTGATCTCACAGATGATTCATCATTGTTGGTTCAAGCCATGGAGCTCTCTGGTCCAAGGTGA 2025 43.16 MLFLYPKLKRKRKEKSEGDSKKKVKKMSGAGRSAKDDDEEKSSISTHLMGMKRTEATVSCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSPTIGNLTNLQIVLLQNNNITGPIPPELGRLSKLQTLDLSNNFFTGEIPSPLGHLRSLQYLRLNNNSLSGVIPMSLANMTQLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGSEAGCHGTTLMPMSMNLNSTQTGLPAVKLKSHKMALTFGLSLACLCLIVLVFGLFIWWRKRSNQPTFFDVKDQQHEEISLGNLRRFQFRELQIATNNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLRLYGFCNTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGGILDWVKKIHLEKKLEMLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6812927 6818059 - CaPI482276_11g005350.1 Cam11g0535 139457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0535 674 ProSiteProfiles Protein kinase domain profile. 354 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0535 674 FunFam Somatic embryogenesis receptor kinase 1 323 430 - -
Cam11g0535 674 Gene3D Transferase(Phosphotransferase) domain 1 431 643 - -
Cam11g0535 674 Pfam Protein tyrosine and serine/threonine kinase 357 623 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0535 674 Gene3D Ribonuclease Inhibitor 81 263 IPR032675 -
Cam11g0535 674 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Cam11g0535 674 SUPERFAMILY L domain-like 83 353 - -
Cam11g0535 674 SMART serkin_6 354 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0535 674 FunFam Somatic embryogenesis receptor-like kinase 1 431 643 - -
Cam11g0535 674 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524(InterPro)
Cam11g0535 674 Pfam Leucine rich repeat 173 232 IPR001611 GO:0005515(InterPro)
Cam11g0535 674 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Cam11g0535 674 Pfam Leucine rich repeat N-terminal domain 82 121 IPR013210 -
Cam11g0535 674 MobiDBLite consensus disorder prediction 10 42 - -
Cam11g0535 674 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 61 674 - -
Cam11g0535 674 FunFam Putative LRR receptor-like serine/threonine-protein kinase 81 263 - -
Cam11g0535 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0535 674 MobiDBLite consensus disorder prediction 1 42 - -
Cam11g0535 674 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2526 Cam-Chr5:33114733 Cam11g0535 Cam-Chr11:6812927 4.70E-230 dispersed
Cam06g1409 Cam-Chr6:25518393 Cam11g0535 Cam-Chr11:6812927 3.60E-185 dispersed
Cam08g2255 Cam-Chr8:27668121 Cam11g0535 Cam-Chr11:6812927 2.20E-195 dispersed
Cam10g0891 Cam-Chr10:20022795 Cam11g0535 Cam-Chr11:6812927 9.90E-132 dispersed
Cam11g0535 Cam-Chr11:6812927 Cam11g0552 Cam-Chr11:6992725 1.10E-72 dispersed
Cam11g0535 Cam-Chr11:6812927 Cam01g2440 Cam-Chr1:36237602 5.10E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85562 PF00069 Pkinase 6.80E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0535 - - - 0.0