Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam11g0572 | ATGCACATCATGTTGCCACTCCTTACAACTTTAGCTTTCCTAACGACGTCGTTTTTAATCTTCTCTTTATTATACGACACCGTTTCTTGCTACTGGTTCACTCCTAGACGCATCAAGAAGAAGATGGCAAAGCAAGGTGTTCATGGCCCTAAACCCCGCCCTCTCCTCGGCAACATCCTCGACATCGCCGCCCTCCTCTCCAAATCCACCTCCTCCGACATGCCCTCCATCTCCCACGACCTCGTCCCCCGTCTCCTACCTCATTTCCTCGCCTGGTCCACCCAATTCGGGAAGAGATTTATATTTTGGAATGGGATTGAGCCGAGAATGTGTCTAACAGAAACGGATTTGATAAAAGAGCTTTTGTCAAAATACAGTGCGGTTTCGGGAAAGTCATGGCTCCAACAACAAGGCTCTAAGCACTTTATTGGGAGAGGTCTTTTAATGGCCAACGGCCAAAATTGGTTCCATCAACGCCATATTGTCGCGCCGGCTTTCGTCGGGGATCGACTTAAGAGTTACGCGGGGTATATGGTGGAGTGCACAAAGGAGATGCTTGAATCAATAGAAAATGAGGTAAAATCGGGGCGATCAGAGTTTGAAATCGGCGAGTATATGACTAGACTCACTGCTGATATAATTTCAAGAACCGAGTTTGAAAGCAGCTACGAAAAGGGAAAACAAATCTTTCATTTACTTACTGTTTTACAGCATCTTTGTGCCCAGGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAATATAACAGAGAGATAAAGGCATTGAAAGGGAAAGTGGAGGAGTTGTTAATGGAGATAATACAGAGTAGAAGGGATTGTGTGGAAATTGGAAGAAGCAGTTCATATGGAAATGATTTATTGGGAATGTTGCTAAATGAAATGCAAAAGAAAAAAGATGGGAATGGTTTGAGTTTGAATTTGCAAATTATAATGGACGAATGCAAAACCTTCTTCTTTGCTGGCCATGAAACCACTGCCCTTTTGCTCACTTGGACTGTCATGTTATTAGCCACTAACCCTTCTTGGCAACACAAGGTTCGAGCCGAAGTTATGGCCATTTGCGGTTCTCAAACGCCTTCCTTTCATCATCTTTCCAAACTCTCCCTGTTGAGTATGGTGATAAATGAATCACTAAGACTATACCCACCAGCAAGTATTCTTCCAAGGATGGCATTTGAAGATATAAAACTTGGAGATTTAGAGATCCCAAAAGGCTTATCAATATGGATTCCAGTGTTAGCCATTCATCATAGTGAAGAATTATGGGGAAAAGATGCAAATGAGTTCAATCCAGAAAGATTTGCCAATTCAAAAGCTTTTACTTCTGGTGGATTCATCCCTTTTGCTTCTGGCCCTCGCAACTGTGTTGGCCAATCTTTTGCTCTTATGGAAACTAAGATCATCTTGGCTATGCTCATCTCTAAATTTAGCTTCACCATCTCGGATAATTATCGGCATGCGCCCGTCGTCGTGCTCACCATAAAACCTAAATACGGTGTTCAAGTTTGCTTGAAGCCTTTGAATTAA | 1560 | 43.33 | MHIMLPLLTTLAFLTTSFLIFSLLYDTVSCYWFTPRRIKKKMAKQGVHGPKPRPLLGNILDIAALLSKSTSSDMPSISHDLVPRLLPHFLAWSTQFGKRFIFWNGIEPRMCLTETDLIKELLSKYSAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIENEVKSGRSEFEIGEYMTRLTADIISRTEFESSYEKGKQIFHLLTVLQHLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEELLMEIIQSRRDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATNPSWQHKVRAEVMAICGSQTPSFHHLSKLSLLSMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFANSKAFTSGGFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 7240175 | 7243848 | + | CaPI482276_11g005720.1 | Cam11g0572 | 139494 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam11g0572 | 519 | Coils | Coil | 263 | 283 | - | - | |
| Cam11g0572 | 519 | Coils | Coil | 179 | 199 | - | - | |
| Cam11g0572 | 519 | SUPERFAMILY | Cytochrome P450 | 49 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | Pfam | Cytochrome P450 | 93 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 511 | IPR050665 | GO:0004497(PANTHER) | |
| Cam11g0572 | 519 | Gene3D | Cytochrome P450 | 31 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | CDD | CYP72_clan | 86 | 512 | - | - | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 423 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 93 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam11g0572 | 519 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g0817 | Cam-Chr6:11263698 | Cam11g0572 | Cam-Chr11:7240175 | 3.00E-89 | dispersed | |
| Cam11g0572 | Cam-Chr11:7240175 | Cam11g1734 | Cam-Chr11:29949501 | 8.00E-90 | dispersed | |
| Cam01g0458 | Cam-Chr1:4883904 | Cam11g0572 | Cam-Chr11:7240175 | 2.70E-81 | transposed | |
| Cam05g0974 | Cam-Chr5:8760622 | Cam11g0572 | Cam-Chr11:7240175 | 1.90E-88 | transposed | |
| Cam05g1329 | Cam-Chr5:14112911 | Cam11g0572 | Cam-Chr11:7240175 | 7.60E-234 | transposed | |
| Cam11g0572 | Cam-Chr11:7240175 | Cam07g0541 | Cam-Chr7:7909670 | 1.40E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam11g0572 | K10717 | - | csv:101215037 | 973.0 |