Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0583 | ATGACGCCATTTGAAGCTCTTTATGGAAAGAGTTGCATGTCGTTTGTTTATTGGCATGAGGTGGGTATTCCAACTACTAATGAGGCTATCCAGAAAAGTAAACCGTGCGACACCCCCCTTCTCGCGAGTTTTCCCTCGCCACACGCTGCGCCGCACGAAGCTTCTCCGCCCACCGCCGCCGATCGCTTGCCTCCTGGCCTCCGTCCTCGCCGCCGTCTTCGATCGCCGGCCGTCCAAGCACAGCTGTTCTTTGGAGATTGTTCCGGACGTTCGCCACTATTTGAAGCGACCGGAGAACTACTAGGAAAACCAAATACCATGGCGGATCTCATTCCACCACCACATAGATCGGCCAACGACTTCTTTTCCGATCCACTTGATTCTCATCCTCTCTGGTTCAAGCCCGACCTATTTCTCTCCCCGAATTTTGATTCCGAGTCCTACATATCTGAGCTTCGAACATTTGTCCCATTTGACACTCTCCGATCTCAGCTCCACTCTCATCTTTCCGCTCTGAACCGTGAGCTCATTGACTTGATCAATCGTGATTATACCGATTTTGTCAACCTGAGCACAAAGCTGGTCGATGTGGAAGCGGCAGTCGTACGAATGCGAGCTCCTTTGGTTGAACTCAGGGAGAAAATTGAGCAATTCAGGGGTTCCGTGGAGTTTTCTCTATCAGCTTTGCAGAATGGATTGCGGCAGAGATCAGAGGCAGCATCGGCCAGAGAGGTCTTGGAATTGTTGCTCGATACATTTCACGTCGTCTCGAAGGTTGAAAAACTGATCAAGGAGCTTCCAAGTGCCCCTGCTGATGGCTCAAACGGAACCATGAATTTAACAGATAAAAGTGCATTAAGTAATGGTGCTTCTTTACCACACATGGAGAACGGAACAAATCTTAGAGAAACACAGAGTATGCTCTTGGAAAGAATTTCCAGTGAAATGAATCGGCTGAAATTTTACATCGCTCATGCACAGGATCTTCCCTTCATTCAAAATATGGACAAGAGGATTCAGAGTGCCAGCCTGTTGCTGGACACGAGCTTGGGACATTGTTTTGTTGATGGACTTGCACATCATGATGAAAATGCTATTTACAATTGCCTACGTGCCTATGCTGCCATAGATAACACCACAAGTGCAGAAGAAATTTTTCGCAGTACTGTTGTATCACCAGCAATTCATAAAGTTTTTCCACATAGAGTTTCTGGCATGGATGCTGGATCATCTGATGATGATTTGGAGAATGATTACAAGCAAATGAAGCAATATATTGATAAAGACTGCAAATTTTTGTTAGAAATATCTGCTACAGAAAACTCAGGACTACATGTATTTGATTTCTTGGCTAATTCAATCCTGAAAGAGGTTCTCTCTGCTATCCAAAAGGCAAAACCAGGTGCATTTTCCCCAGGAAGACCTACTGAATTCTTAAAGAACTACAAGTCGAGCCTTGATTTCTTGGCGTACTTGGAAGGCTATTGTCCATCCAGATCTGCTGTTGCTAAATTTCGAGCTGCATCTGTGTATAATGAGTTCATGAAGCAATGGAATATTGGGGTTTATTTTTCTCTGAGGCTTCAGGAAATAGCTGGGGCTTTGGATTCGTCCCTTTCAGCACCCATTCTAACCCCCATACAAACTTCATCTTCTGGCGGGGGAAATAATCAGGATCTAACATTAAAGCAGAGTGTGATGCTTTTAGACTGTCTGACAGCATGCTGGAGAGATGATGTTCTCGTCCTTTCTTGTTCTGACAAGTTTCTTCGTCTATCTTTGCAGCTCCTTTCAAGATACTCCAACTGGTTGTCATCTGGTCTAGCTGCCCGTAAGACGGGGACAGGCTCCCATCCAGGTTCTGAATGGGCTGTAGCAGCTGCCCCAGATGATTTGATATATATAATCCATGACCTTGGTTATCTAGCCACGGTGGTAGCTGGTAATTTTTTGGAAACTGTACTTCAGCTCCTATCGTCATGCCCTGCAGATGTTCTCGATTCAGTAAAGCAGAGCATTTTGCACAGTGGAAAGTCATTGAATAATTTAATGCCCAAAGTTATTGGTGCCATAGTTGCTTCACTGGTTGAGAAGTCTGTTGAGGACTTGAGACAGCTGAAGGGTATAACAGCAACATACAGGATGACCAATAAACCACTACCTGTAAGGCATTCACCCTATGTATCAGGGTTGCTACGCCCCTTAAAGGCCTTATTGGATGGAGAGAGGGCGTCATCTTTTTTGACAACGGAAACAAGGAATGCACTGCTGATCGATGCTATGACAGAGATTACTGCTCGTTATTACGAGCAAGCAGCTGATCTTGTTAGCTTGGCTAGGAAAACAGATTCGTCACTCCAGAAAATCCGGCAGGGAGTACAAAGACGAGCTGGAGCAAGCTCAGATGTTTCAGACCATAACATCTCTGACACTGACAAGATTTGCATGCAACTCTTTCTTGATATTCAGGAGTATGGTCGCAACCTTTCAGCCCTTGGGGTTGAAGCAGCGACACACCGCCCGCTGCTACAAAACTCCATCTCGAGAGAGAAATCGGATCACTTTGAAATGGCGGTCGCTTTCCATGATGTCAAGTCTGCAGCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCAAAGGATGATGTTACCGTTTATGAAGCGATCTCCAAACCCGTTTCCAGTGAATATGTTAACGTGTCTAGGTGGAGTAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTTGATGCAGTTGCAACCCCACCAGCTGCAGATGCAAAGGCTGCTGATGACGATGATGACGACGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTGCCATTAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGACATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTAGCTGTGACATCGTGGCCTTCAACAAAATATAATTTCTGTTCGTCAGAACCAAAGACAGCTGGTTTCAAAGATGTTGCTGAGTCTGAGGAAGATGTTTAG | 3243 | 45.3 | MTPFEALYGKSCMSFVYWHEVGIPTTNEAIQKSKPCDTPLLASFPSPHAAPHEASPPTAADRLPPGLRPRRRLRSPAVQAQLFFGDCSGRSPLFEATGELLGKPNTMADLIPPPHRSANDFFSDPLDSHPLWFKPDLFLSPNFDSESYISELRTFVPFDTLRSQLHSHLSALNRELIDLINRDYTDFVNLSTKLVDVEAAVVRMRAPLVELREKIEQFRGSVEFSLSALQNGLRQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSAPADGSNGTMNLTDKSALSNGASLPHMENGTNLRETQSMLLERISSEMNRLKFYIAHAQDLPFIQNMDKRIQSASLLLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRSTVVSPAIHKVFPHRVSGMDAGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQKAKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYFSLRLQEIAGALDSSLSAPILTPIQTSSSGGGNNQDLTLKQSVMLLDCLTACWRDDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLAARKTGTGSHPGSEWAVAAAPDDLIYIIHDLGYLATVVAGNFLETVLQLLSSCPADVLDSVKQSILHSGKSLNNLMPKVIGAIVASLVEKSVEDLRQLKGITATYRMTNKPLPVRHSPYVSGLLRPLKALLDGERASSFLTTETRNALLIDAMTEITARYYEQAADLVSLARKTDSSLQKIRQGVQRRAGASSDVSDHNISDTDKICMQLFLDIQEYGRNLSALGVEAATHRPLLQNSISREKSDHFEMAVAFHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYEAISKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKFDAVATPPAADAKAADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVAVTSWPSTKYNFCSSEPKTAGFKDVAESEEDV | 1080 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7361155 | 7379217 | + | CaPI482276_11g005830.1 | Cam11g0583 | 139505 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0583 | 1080 | SMART | EF1_GNE_2 | 989 | 1079 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam11g0583 | 1080 | MobiDBLite | consensus disorder prediction | 948 | 962 | - | - | |
Cam11g0583 | 1080 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 953 | 961 | IPR001326 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam11g0583 | 1080 | SUPERFAMILY | GST C-terminal domain-like | 864 | 925 | IPR036282 | - | |
Cam11g0583 | 1080 | FunFam | Elongation factor 1-delta 1 | 859 | 934 | - | - | |
Cam11g0583 | 1080 | Gene3D | - | 982 | 1065 | IPR014717 | - | |
Cam11g0583 | 1080 | MobiDBLite | consensus disorder prediction | 942 | 966 | - | - | |
Cam11g0583 | 1080 | Pfam | COG2 N-terminal | 131 | 205 | IPR024602 | - | |
Cam11g0583 | 1080 | FunFam | Elongation factor 1-beta 1 like | 983 | 1060 | - | - | |
Cam11g0583 | 1080 | PANTHER | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 | 117 | 839 | IPR009316 | GO:0006891(PANTHER)|GO:0007030(PANTHER)|GO:0007030(InterPro)|GO:0015031(InterPro)|GO:0016020(InterPro)|GO:0017119(PANTHER) | |
Cam11g0583 | 1080 | Coils | Coil | 961 | 981 | - | - | |
Cam11g0583 | 1080 | Gene3D | - | 838 | 931 | - | - | |
Cam11g0583 | 1080 | SUPERFAMILY | eEF-1beta-like | 986 | 1051 | IPR036219 | - | |
Cam11g0583 | 1080 | Pfam | EF-1 guanine nucleotide exchange domain | 991 | 1050 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cam11g0583 | 1080 | MobiDBLite | consensus disorder prediction | 41 | 70 | - | - | |
Cam11g0583 | 1080 | Pfam | COG complex component, COG2, C-terminal | 516 | 822 | IPR024603 | - | |
Cam11g0583 | 1080 | CDD | EF1B | 987 | 1048 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0583 | K20289 | - | csv:101215350 | 1371.68 |