Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0604 ATGGCTGATTCAAGATTCAGAGGAGTTTTGGTTTTGACTTTGGCTTTGTTTATGCTCTTTTTGGGGAATGTCTCAGCTCAACTTTCTACTGGCTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACCGTCAAATCCTCTGTTCGATCTGCTGTCTCCAGTGAAGCTCGAATGGGCGCTTCCATTCTTCGCTTGTTTTTTCATGACTGTTTCGTCAATGGATGCGACGGGTCCATTTTGTTAGATGACACGTCAAGCTTTACTGGAGAGAAAAATGCAAACCCCAATAGAAACTCAGCTAGAGGCTTTGATGTCATTGATAACATCAAAACCGCTGTCGAAAAAGCTTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGACTCTGTCGTTCTCCTAGGAGGGCCAAGCTGGAATGTGAAGTTGGGAAGAAGAGACGCCACAACTGCAAGCCAATCCCAAGCCAACAGCGATATCCCCGGGCCAACTTCAACTTTAAACCAACTCAGCTCTAGATTCAGCGCTCTCGGACTCTCCAACACCGACTTGGTTGCCCTTTCAGGTGGGCACACGATCGGGCAAGCACGGTGCACGACATTTAGAGGGAGAATATACAGCAATGGCACAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAATTGCCCCAATACCTCAGGAACTGGAGACAACAATTTGGCTCCTTTGGATTTGCAAACTCCAAACTCATTTGACAACAACTACTTCAAGAATCTTCTTCAAAACAAGGGCCTTCTACAATCGGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCAGTGTTCAAAATTACGCAAATGCCCCTGCTCGTTTCTTCTCTGATTTTGCTGCTGCCATGGTGAAGATGGGAGATATCAGTCCTCTTACTGGCTCCAATGGTGAAATTAGGAAGGACTGCAGGAGGGTTAACTAA 972 45.37 MADSRFRGVLVLTLALFMLFLGNVSAQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPGPTSTLNQLSSRFSALGLSNTDLVALSGGHTIGQARCTTFRGRIYSNGTNIESSFARTRQSNCPNTSGTGDNNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSSVQNYANAPARFFSDFAAAMVKMGDISPLTGSNGEIRKDCRRVN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7585411 7586763 - CaPI482276_11g006040.1 Cam11g0604 139526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0604 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cam11g0604 323 FunFam Peroxidase 31 174 - -
Cam11g0604 323 Pfam Peroxidase 44 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Cam11g0604 323 FunFam Peroxidase 165 302 - -
Cam11g0604 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam11g0604 323 PANTHER PEROXIDASE 72-RELATED 16 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 Gene3D - 32 323 - -
Cam11g0604 323 Gene3D Peroxidase, domain 2 165 302 - -
Cam11g0604 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam11g0604 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2032 Cam-Chr1:33479474 Cam11g0604 Cam-Chr11:7585411 7.40E-89 dispersed
Cam02g1980 Cam-Chr2:32907768 Cam11g0604 Cam-Chr11:7585411 1.10E-108 dispersed
Cam02g1981 Cam-Chr2:32912262 Cam11g0604 Cam-Chr11:7585411 4.60E-109 dispersed
Cam02g1983 Cam-Chr2:32927516 Cam11g0604 Cam-Chr11:7585411 8.60E-95 dispersed
Cam02g1984 Cam-Chr2:32934242 Cam11g0604 Cam-Chr11:7585411 6.60E-95 dispersed
Cam02g2450 Cam-Chr2:36954760 Cam11g0604 Cam-Chr11:7585411 2.20E-74 dispersed
Cam02g2451 Cam-Chr2:36964018 Cam11g0604 Cam-Chr11:7585411 1.30E-77 dispersed
Cam07g0902 Cam-Chr7:22142109 Cam11g0604 Cam-Chr11:7585411 1.40E-87 dispersed
Cam09g1229 Cam-Chr9:13954590 Cam11g0604 Cam-Chr11:7585411 2.30E-75 dispersed
Cam09g1808 Cam-Chr9:32443025 Cam11g0604 Cam-Chr11:7585411 2.70E-73 dispersed
Cam11g0097 Cam-Chr11:2630746 Cam11g0604 Cam-Chr11:7585411 3.10E-105 dispersed
Cam11g0098 Cam-Chr11:2635283 Cam11g0604 Cam-Chr11:7585411 1.30E-106 dispersed
Cam11g0604 Cam-Chr11:7585411 Cam11g0736 Cam-Chr11:9148457 5.70E-62 dispersed
Cam01g0491 Cam-Chr1:5181324 Cam11g0604 Cam-Chr11:7585411 3.80E-77 transposed
Cam05g2530 Cam-Chr5:33137314 Cam11g0604 Cam-Chr11:7585411 3.90E-77 transposed
Cam11g0064 Cam-Chr11:2228413 Cam11g0604 Cam-Chr11:7585411 9.10E-105 transposed
Cam11g0604 Cam-Chr11:7585411 Cam03g0022 Cam-Chr3:1238973 3.40E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0604 K00430 - csv:101218447 568.54