Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0632 ATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCCTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA 498 41.16 MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7851178 7851675 + CaPI482276_11g006320.1 Cam11g0632 139554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0632 165 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Cam11g0632 165 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 120 - -
Cam11g0632 165 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cam11g0632 165 Coils Coil 91 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam10g1288 Cam-Chr10:26329080 Cam11g0632 Cam-Chr11:7851178 4.50E-38 dispersed
Cam11g0632 Cam-Chr11:7851178 Cam11g1136 Cam-Chr11:22193914 1.10E-37 dispersed
Cam11g0632 Cam-Chr11:7851178 Cam07g0466 Cam-Chr7:6456415 1.70E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52883 PF03195 LOB 1.20E-38 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0632 - - - 0.0