Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0632 | ATGAGAGGTTGGCATGAGACTCGTTCTTCTTCTTCCTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCATTCCCACTTGTATATTTGCTCCTTATTTTAGGTCTGATGAGCCAAAGAAATTTGCCAAAGTTCATAAGGTTTTTGGGGCAAGTAATGTGAGTAAAATTCTGACTGAGGTTCCTGAGGAGCAGAGAGAAGACACTGTCAATTCTTTGGCTTATGAAGCTGAGGCCAGGCTGAGGGATCCTGTTTATGGCTGCATCGGCGCCATAGCTTTGTTGCAAACAAAAATGGTGGAGCTTCAACATGATCTTGCCCTTGCCAAAGCTCGTCTTGCTCGTTATGCTAATACTTCTTCTTCTTCTTCTTTAGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTCAGTATCTCTTCAGGCCAGAGCTCTTCTGATATCACCCAATATGGATATTTATGTGACTTCTCTCATTTTCCTTATCCATTTAAAGCTTGA | 498 | 41.16 | MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARYANTSSSSSLENCVVNMSYGGFSISSGQSSSDITQYGYLCDFSHFPYPFKA | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7851178 | 7851675 | + | CaPI482276_11g006320.1 | Cam11g0632 | 139554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0632 | 165 | ProSiteProfiles | LOB domain profile. | 11 | 112 | IPR004883 | - | |
Cam11g0632 | 165 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 11 | 120 | - | - | |
Cam11g0632 | 165 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 109 | IPR004883 | - | |
Cam11g0632 | 165 | Coils | Coil | 91 | 118 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam10g1288 | Cam-Chr10:26329080 | Cam11g0632 | Cam-Chr11:7851178 | 4.50E-38 | dispersed | |
Cam11g0632 | Cam-Chr11:7851178 | Cam11g1136 | Cam-Chr11:22193914 | 1.10E-37 | dispersed | |
Cam11g0632 | Cam-Chr11:7851178 | Cam07g0466 | Cam-Chr7:6456415 | 1.70E-33 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52883 | PF03195 | LOB | 1.20E-38 | No_clan | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0632 | - | - | - | 0.0 |