Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0671 | ATGACGACGATCCAAAACTCCCACGTTGTCGCAATGGATGTAGAACGACAACAAGAACAAGAACGGCCTTCCCCACTTTCCGCCGCTCCCACTGACTCCTCACCGGCCTCCGATGATGTGCGGCGGTGCTCGGCCCAGTCCAGGGCTGACATTCTGGAGGAGGCGGTGGCGGAGAAAAGAAGGAGATCCTCTGTCTCGGATTGCTCTGTCGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGTCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAGTTGGGTTGTTCTTGTAAGGATGATTTGGCTGCTGCTCATAAGCAGTGTGCCGAGGCTTGGTTCAAGATAAAGGGCGACATCACATGTGAGATCTGTGGATCAATTGCACACAATGTTACTGGTACTTACGAAGCCGATTCGACAGAGCAGCGCAATGAGTCAAACGAAGCAACAACAGCAACTGCTACAGCTGCTGTCGTGATGCCACTGCACTCTACAGAGGTTCGGAACTTCTGGCAGGGCCACAGGTTTATATTATATGATTGGGCTTTGTATTGTTTTAAAGAAAACAGACAGGTTGATGTTCGAAAAGATGCTGAAACGGCTGAGCCTAGCTGGATTGGCCATCTTGTCTCTTGTCGTCTCATTGTGGATAATTCTCTGTTGAGATTCCGACATGTAGTTCCTTCTATACCAACAAAATCGGATTTGGGTCTCAAAATAATTAATGTTAAAAACTGA | 795 | 47.67 | MTTIQNSHVVAMDVERQQEQERPSPLSAAPTDSSPASDDVRRCSAQSRADILEEAVAEKRRRSSVSDCSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKDDLAAAHKQCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNESNEATTATATAAVVMPLHSTEVRNFWQGHRFILYDWALYCFKENRQVDVRKDAETAEPSWIGHLVSCRLIVDNSLLRFRHVVPSIPTKSDLGLKIINVKN | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8343860 | 8346951 | + | CaPI482276_11g006710.1 | Cam11g0671 | 139593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0671 | 264 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
Cam11g0671 | 264 | SUPERFAMILY | RING/U-box | 89 | 146 | - | - | |
Cam11g0671 | 264 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 153 | IPR013083 | - | |
Cam11g0671 | 264 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 84 | 150 | IPR011016 | GO:0008270(InterPro) | |
Cam11g0671 | 264 | SMART | ringv_2 | 91 | 144 | IPR011016 | GO:0008270(InterPro) | |
Cam11g0671 | 264 | PANTHER | ZINC FINGER, RING-CH-TYPE | 17 | 197 | - | - | |
Cam11g0671 | 264 | Pfam | RING-variant domain | 92 | 143 | IPR011016 | GO:0008270(InterPro) | |
Cam11g0671 | 264 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2441 | Cam-Chr1:36250973 | Cam11g0671 | Cam-Chr11:8343860 | 2.40E-16 | dispersed | |
Cam11g0671 | Cam-Chr11:8343860 | Cam11g1695 | Cam-Chr11:29639861 | 2.10E-09 | dispersed | |
Cam04g0213 | Cam-Chr4:7588609 | Cam11g0671 | Cam-Chr11:8343860 | 6.00E-09 | transposed | |
Cam10g2129 | Cam-Chr10:34863914 | Cam11g0671 | Cam-Chr11:8343860 | 1.80E-30 | wgd | |
Cam11g0671 | Cam-Chr11:8343860 | Cam03g0101 | Cam-Chr3:1996792 | 2.30E-29 | wgd | |
Cam11g0671 | Cam-Chr11:8343860 | Cam04g0750 | Cam-Chr4:21899487 | 2.50E-31 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0671 | - | - | - | 0.0 |