Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0692 ATGGCATCCATTTCGAAACGGCTACTCCTCTTCGCGGCGGCGCTACTCGCCACCGCTGAAATAGCAACCTCCATCACCCGATGCCCGGACTGCGGCGGCGCTTCCGTCCCCTATCCTCTGAGTACAAGCCCCACATGTGGGGACCAATCGTATAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGACACGCTGAACAACACGTACCCGATCATCTCGATCAACCCGTCGATCCAACGGCTGGTGATTCAGCCCTCAAATTTCCTCCCGAACACGTGTGTGACAGCGGATATCGCTCACGACGGAATCAAATTGAACAGTAGTTTACCCTTCAACGTGACGAGCGGGAACACGATCCTGTACTTCAACTGTACGGATTCGCTTCTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACATCAACGGGTCAAGAGGAGCGGCGGCGTGCGAGGCGGCGCCGCTGTGCTGCACGTTTCGGGCGGGTGGGTCGTCGAATTCGTACATGATTCGGGTGAGGGAATCGGGGTGCAGCGCGTACACGAGCTTTGTGAACTTGAACCCGAGTTTGGGAGTGGTTCCGTGGCCCGAACCCGGGTTGGAGCTGCAGTGGCTTTTGCCGAGGGAGCCGGTTTGTAATACGCAGGCTGATTGTGATGTGAACGCGGTTTGTGGTGTTGACCCGAGTGGGACGGCGTTGAGACGCTGTCTTTGTAATTCTGGGTTTGTGTGGGACCCTGTTGCTGGAATCTGCTCTCAAAATACGTGTCATGATCCCGATGGTTGTAGTAAGCACCGAACTGCACTGATAGCTGGCATTGTATCCGGCGTGGGCGCGGCGTTGATCATCTCAACAATAGCAATGCTAGTGTACAATCGGCATAGAAGAGCGAAAGAAGCTCAAGATCGTTTAACAAAGGAGCGTGAAGCCATTCTGAATTCCAACGGCGGAGGCGGAAGGGCGGCAAAGATCTTCACTGGTAAAGAGATCAAGAGGGCCACTCACAACTTCTCCGTCGACCACCTTCTGGGTGTCGGCGGCTACGGTGAGGTCTACAAAGGCGTTCTCGGGGACGGAACCACCGTGGCCGTAAAGTGCGCCAAGCTCGGAAACGCAAAAGGGACCGACCAAGTCCTGAATGAGGTCCGAATCCTGTGCCAAGTTAACCACCGGAGTCTTGTCCGGCTCCTTGGCTGCTGCGTCGAACTAGAACAGCCAATTTTGGTGTACGAGTATATTCCCAACGGCACTCTTCTCGACCATTTACAAGGTATTAAAGACACAAGGCCACTATCATGGGAGGAACGACTCCGAATTGCGCAGGGCACAGCAGAGGGACTAGCATATCTTCATTTCTCAGCAGTTCCACCCATCTACCACCGAGACGTCAAATCTAGCAACATCCTCTTAGACCACAAGCTAATCCCCAAAGTTTCAGATTTCGGGCTCTCCCGATTGGCAGAAACAGATCTAAGCCATATCTCAACTTGCGCCCAAGGAACTCTAGGCTACCTGGACCCCGAGTACTATCGAAACTATCAATTGACGGACAAGAGCGACGTGTACAGCTTTGGAGTGGTTCTGCTTGAGCTATTGACATCACAAAAGGCCATCGACTTCGGTCGTGAGGCTGACGACGTCAACTTGGCAGTTTATGTGCAACGGCTGGTGGAGGAAGAGAGATTGGTGGATGCCATTGATCCGTGGCTGAAGAAGGGAGCTACAGATGTGGAGGTTGATACGATGAAGGCTTTGGGGTTCCTTGCAGTGGGGTGCTTGGAACAGAGAAGGCAGAACCGACCTTCTATGAAAGAAGTGGTGGAGGAGATTCAATACATCATTAGCATCGCCATTGCTAAGGCTTAA 1878 53.46 MASISKRLLLFAAALLATAEIATSITRCPDCGGASVPYPLSTSPTCGDQSYKIRCDAGSLKFDTLNNTYPIISINPSIQRLVIQPSNFLPNTCVTADIAHDGIKLNSSLPFNVTSGNTILYFNCTDSLLRSPLNCSSTSLCHSYINGSRGAAACEAAPLCCTFRAGGSSNSYMIRVRESGCSAYTSFVNLNPSLGVVPWPEPGLELQWLLPREPVCNTQADCDVNAVCGVDPSGTALRRCLCNSGFVWDPVAGICSQNTCHDPDGCSKHRTALIAGIVSGVGAALIISTIAMLVYNRHRRAKEAQDRLTKEREAILNSNGGGGRAAKIFTGKEIKRATHNFSVDHLLGVGGYGEVYKGVLGDGTTVAVKCAKLGNAKGTDQVLNEVRILCQVNHRSLVRLLGCCVELEQPILVYEYIPNGTLLDHLQGIKDTRPLSWEERLRIAQGTAEGLAYLHFSAVPPIYHRDVKSSNILLDHKLIPKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFGREADDVNLAVYVQRLVEEERLVDAIDPWLKKGATDVEVDTMKALGFLAVGCLEQRRQNRPSMKEVVEEIQYIISIAIAKA 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8550120 8553170 - CaPI482276_11g006920.1 Cam11g0692 139614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0692 625 FunFam Wall-associated receptor kinase-like 20 417 625 - -
Cam11g0692 625 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524(InterPro)
Cam11g0692 625 SUPERFAMILY Protein kinase-like (PK-like) 327 613 IPR011009 -
Cam11g0692 625 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 617 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cam11g0692 625 Gene3D Phosphorylase Kinase; domain 1 317 416 - -
Cam11g0692 625 CDD STKc_IRAK 347 615 - -
Cam11g0692 625 SMART serkin_6 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0692 625 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Cam11g0692 625 Pfam Protein tyrosine and serine/threonine kinase 343 613 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam11g0692 625 FunFam Wall-associated receptor kinase-like 20 302 416 - -
Cam11g0692 625 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam11g0692 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2016 Cam-Chr8:25870316 Cam11g0692 Cam-Chr11:8550120 6.10E-80 dispersed
Cam10g1918 Cam-Chr10:33236267 Cam11g0692 Cam-Chr11:8550120 3.30E-162 dispersed
Cam11g0692 Cam-Chr11:8550120 Cam11g0938 Cam-Chr11:14910907 7.90E-76 dispersed
Cam11g0692 Cam-Chr11:8550120 Cam04g0932 Cam-Chr4:23437721 6.40E-187 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85569 PF00069 Pkinase 7.00E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0692 - - - 0.0