Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g0696 | ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCGACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGAAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTATGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGATGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAGAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACCGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCCGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGACCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAATCACGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATGCAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTGCGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGACGCAGTCCGAACGTGCATGCGTGCACACCGCCCGTTGTCGTCCTCCTCAGAATCGTCGGGATCTATGAGTGGCGGCCCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACAACATCATCACCACAACCAAAGCATTGA | 1152 | 47.66 | MAEIWFGADADPPSPPKSRPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVREEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSRAVLSRKTTGILPLSSDHKPDRGDELSRIESRGGRVIYREGARVLGVYATSRAIGDGCLKPCVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHRPLSSSSESSGSMSGGPDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTTSSPQPKH | 383 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8570213 | 8571547 | - | CaPI482276_11g006960.1 | Cam11g0696 | 139618 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g0696 | 383 | SMART | PP2C_4 | 65 | 371 | IPR001932 | - | |
Cam11g0696 | 383 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
Cam11g0696 | 383 | FunFam | Protein phosphatase 2C 50 | 74 | 380 | - | - | |
Cam11g0696 | 383 | Gene3D | - | 65 | 379 | IPR036457 | - | |
Cam11g0696 | 383 | PANTHER | PROTEIN PHOSPHATASE | 65 | 372 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cam11g0696 | 383 | ProSiteProfiles | PPM-type phosphatase domain profile. | 75 | 373 | IPR001932 | - | |
Cam11g0696 | 383 | Pfam | Protein phosphatase 2C | 75 | 366 | IPR001932 | - | |
Cam11g0696 | 383 | ProSitePatterns | PPM-type phosphatase domain signature. | 111 | 119 | IPR000222 | GO:0043169(InterPro) | |
Cam11g0696 | 383 | MobiDBLite | consensus disorder prediction | 50 | 69 | - | - | |
Cam11g0696 | 383 | SUPERFAMILY | PP2C-like | 74 | 374 | IPR036457 | - | |
Cam11g0696 | 383 | CDD | PP2Cc | 74 | 373 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam08g1452 | Cam-Chr8:20806036 | Cam11g0696 | Cam-Chr11:8570213 | 2.00E-47 | dispersed | |
Cam09g0018 | Cam-Chr9:1120409 | Cam11g0696 | Cam-Chr11:8570213 | 1.10E-26 | dispersed | |
Cam11g0696 | Cam-Chr11:8570213 | Cam11g0846 | Cam-Chr11:11170124 | 5.80E-21 | dispersed | |
Cam11g0696 | Cam-Chr11:8570213 | Cam03g0118 | Cam-Chr3:2108061 | 4.20E-88 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g0696 | K14497 | - | csv:101220425 | 498.049 |