Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g0699 ATGGCGGATAGATGTTGGGGTGGAATTGGGAATCTTGCACACACAGAACAAGAACATGGTACTAAGAATGAAGATGAGGATGGAATTAAAACCAAGAGACGGCCACGAGGGAGACCACCAGGCTCAAAAAACAAGCCAAAGCCACCCATTGTTATCACTAAACATACTCCCAATGCCTTTCAAACCCACGTTTTCGAAATCACCACCGCCACCGACATTGCCCACTCCATTTCCACTTTCGCCCACCGCCGCCACCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCGCTGACGTCACTCTCCGACAACCCCCCGGCGTCATTACCCTCCACGAACGCTTCGAGATTTTATCTCTCTCTGGCGCTTTCCTCCCCACACCCTCCCCCCACGGGGCTACCGCCTTGACCGTCTATCTCGCCGGCGGCCAAGGCCGGGTCGTTGGAGGCCTCGTCGCCGGTCCCCTCATCGCCGCTGGCCCCGTCATTGTAGTTGCAGCTTCATTTACCAACGCTATGTATGAAAAATTACCGATTGAAGAAGATGAAGAGAATGCAGAGGAGAAGAAATTAGAAGAAGAAAATATTAATGGAAATAATTCAGTGGGAGAATCATCATCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACTTCTGTGCCAGTTTATAATTTGATTCCTAATACTCAAATTTCACAAGAAATGTTTTGGGCTCCTCTTCCTCTTCCTCCTCCATCTTATTAA 747 50.47 MADRCWGGIGNLAHTEQEHGTKNEDEDGIKTKRRPRGRPPGSKNKPKPPIVITKHTPNAFQTHVFEITTATDIAHSISTFAHRRHRGVSILSATGLVADVTLRQPPGVITLHERFEILSLSGAFLPTPSPHGATALTVYLAGGQGRVVGGLVAGPLIAAGPVIVVAASFTNAMYEKLPIEEDEENAEEKKLEEENINGNNSVGESSSSAAAAAAAAATTSVPVYNLIPNTQISQEMFWAPLPLPPPSY 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8606729 8607475 + CaPI482276_11g006990.1 Cam11g0699 139621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g0699 248 MobiDBLite consensus disorder prediction 1 53 - -
Cam11g0699 248 Gene3D - 61 191 - -
Cam11g0699 248 Coils Coil 179 199 - -
Cam11g0699 248 CDD DUF296 61 169 IPR005175 -
Cam11g0699 248 ProSiteProfiles PPC domain profile profile. 57 192 IPR005175 -
Cam11g0699 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 240 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam11g0699 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 170 IPR005175 -
Cam11g0699 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 57 183 - -
Cam11g0699 248 PIRSF ESCAROLA 9 242 IPR014476 GO:0003680(InterPro)
Cam11g0699 248 MobiDBLite consensus disorder prediction 180 209 - -
Cam11g0699 248 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g1197 Cam-Chr9:13079260 Cam11g0699 Cam-Chr11:8606729 1.50E-50 dispersed
Cam10g0169 Cam-Chr10:3301644 Cam11g0699 Cam-Chr11:8606729 1.10E-47 dispersed
Cam11g0699 Cam-Chr11:8606729 Cam11g1477 Cam-Chr11:27507816 3.60E-32 dispersed
Cam11g0699 Cam-Chr11:8606729 Cam07g0345 Cam-Chr7:4631431 1.70E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g0699 - - - 0.0